RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 IL36AQ9UHA7 158 aa20.88■□□□□ 0.93
TOP3A-219ENST00000584887 RAXQ9Y2V3 346 aa20.88■□□□□ 0.93
TOP3A-219ENST00000584887 EPHB6O15197 1021 aa20.87■□□□□ 0.93
TOP3A-219ENST00000584887 RFPL3O75679 317 aa20.87■□□□□ 0.93
TOP3A-219ENST00000584887 GJB6O95452 261 aa20.87■□□□□ 0.93
TOP3A-219ENST00000584887 SDC4P31431 198 aa20.87■□□□□ 0.93
TOP3A-219ENST00000584887 FMO1Q01740 532 aa20.87■□□□□ 0.93
TOP3A-219ENST00000584887 GNA12Q03113 381 aa20.87■□□□□ 0.93
TOP3A-219ENST00000584887 CYP4F3Q08477 520 aa20.87■□□□□ 0.93
TOP3A-219ENST00000584887 OVGP1Q12889 678 aa20.87■□□□□ 0.93
TOP3A-219ENST00000584887 SMAD1Q15797 465 aaKnown RBP20.87■□□□□ 0.93
TOP3A-219ENST00000584887 ZNF783Q6ZMS7 281 aa20.87■□□□□ 0.93
TOP3A-219ENST00000584887 DPY19L3Q6ZPD9 716 aa20.87■□□□□ 0.93
TOP3A-219ENST00000584887 ERN2Q76MJ5 926 aaKnown RBP20.87■□□□□ 0.93
TOP3A-219ENST00000584887 HORMAD1Q86X24 394 aa20.87■□□□□ 0.93
TOP3A-219ENST00000584887 RXFP2Q8WXD0 754 aa20.87■□□□□ 0.93
TOP3A-219ENST00000584887 PPP1R16AQ96I34 528 aa20.87■□□□□ 0.93
TOP3A-219ENST00000584887 LMBRD1Q9NUN5 540 aa20.87■□□□□ 0.93
TOP3A-219ENST00000584887 URB1O60287 2271 aaKnown RBP20.87■□□□□ 0.93
TOP3A-219ENST00000584887 DOCK4Q8N1I0 1966 aa20.86■□□□□ 0.93
TOP3A-219ENST00000584887 RNF103O00237 685 aa20.86■□□□□ 0.93
TOP3A-219ENST00000584887 LEFTY1O75610 366 aa20.86■□□□□ 0.93
TOP3A-219ENST00000584887 CHRNB2P17787 502 aa20.86■□□□□ 0.93
TOP3A-219ENST00000584887 AKT2P31751 481 aa20.86■□□□□ 0.93
TOP3A-219ENST00000584887 ANP32AP39687 249 aaKnown RBP20.86■□□□□ 0.93
TOP3A-219ENST00000584887 RXRGP48443 463 aa20.86■□□□□ 0.93
TOP3A-219ENST00000584887 SERPINH1P50454 418 aaKnown RBP20.86■□□□□ 0.93
TOP3A-219ENST00000584887 ARL13BQ3SXY8 428 aa20.86■□□□□ 0.93
TOP3A-219ENST00000584887 CDKAL1Q5VV42 579 aa20.86■□□□□ 0.93
TOP3A-219ENST00000584887 BNIPLQ7Z465 357 aa20.86■□□□□ 0.93
TOP3A-219ENST00000584887 CALN1Q9BXU9 219 aa20.86■□□□□ 0.93
TOP3A-219ENST00000584887 ZNF212Q9UDV6 495 aa20.86■□□□□ 0.93
TOP3A-219ENST00000584887 FCF1Q9Y324 198 aaKnown RBP20.86■□□□□ 0.93
TOP3A-219ENST00000584887 PCDHGA1Q9Y5H4 931 aa20.86■□□□□ 0.93
TOP3A-219ENST00000584887 ACTL7AQ9Y615 435 aa20.86■□□□□ 0.93
TOP3A-219ENST00000584887 DMXL2Q8TDJ6 3036 aa20.86■□□□□ 0.93
TOP3A-219ENST00000584887 COL5A1P20908 1838 aaPredicted RBP20.85■□□□□ 0.93
TOP3A-219ENST00000584887 ARID1BQ8NFD5 2236 aaPredicted RBP20.85■□□□□ 0.93
TOP3A-219ENST00000584887 CYP1A1P04798 512 aaPredicted RBP20.85■□□□□ 0.93
TOP3A-219ENST00000584887 THEGLP0DJG4 465 aa20.85■□□□□ 0.93
TOP3A-219ENST00000584887 JUPP14923 745 aa20.85■□□□□ 0.93
TOP3A-219ENST00000584887 MMP8P22894 467 aa20.85■□□□□ 0.93
TOP3A-219ENST00000584887 STAT1P42224 750 aa20.85■□□□□ 0.93
TOP3A-219ENST00000584887 ACADVLP49748 655 aa20.85■□□□□ 0.93
TOP3A-219ENST00000584887 ZNF284Q2VY69 593 aa20.85■□□□□ 0.93
TOP3A-219ENST00000584887 SEL1L3Q68CR1 1132 aa20.85■□□□□ 0.93
TOP3A-219ENST00000584887 TRIM72Q6ZMU5 477 aa20.85■□□□□ 0.93
TOP3A-219ENST00000584887 ARCQ7LC44 396 aa20.85■□□□□ 0.93
TOP3A-219ENST00000584887 TMPRSS12Q86WS5 348 aa20.85■□□□□ 0.93
TOP3A-219ENST00000584887 RYBPQ8N488 228 aaPredicted RBP20.85■□□□□ 0.93
TOP3A-219ENST00000584887 PCDH20Q8N6Y1 951 aaKnown RBP20.85■□□□□ 0.93
TOP3A-219ENST00000584887 JOSD2Q8TAC2 188 aa20.85■□□□□ 0.93
TOP3A-219ENST00000584887 GPT2Q8TD30 523 aa20.85■□□□□ 0.93
TOP3A-219ENST00000584887 TM6SF2Q9BZW4 377 aa20.85■□□□□ 0.93
TOP3A-219ENST00000584887 ZDHHC6Q9H6R6 413 aa20.85■□□□□ 0.93
TOP3A-219ENST00000584887 SEPT11Q9NVA2 429 aaKnown RBP20.85■□□□□ 0.93
TOP3A-219ENST00000584887 FANCLQ9NW38 375 aa20.85■□□□□ 0.93
TOP3A-219ENST00000584887 OR12D3Q9UGF7 316 aa20.85■□□□□ 0.93
TOP3A-219ENST00000584887 WASF2Q9Y6W5 498 aa20.85■□□□□ 0.93
TOP3A-219ENST00000584887 DSPP15924 2871 aaKnown RBP20.84■□□□□ 0.93
TOP3A-219ENST00000584887 ZMPSTE24O75844 475 aa20.84■□□□□ 0.93
TOP3A-219ENST00000584887 ADRA1BP35368 520 aa20.84■□□□□ 0.93
TOP3A-219ENST00000584887 HNF1BP35680 557 aa20.84■□□□□ 0.93
TOP3A-219ENST00000584887 ACVRL1P37023 503 aa20.84■□□□□ 0.93
TOP3A-219ENST00000584887 NSFP46459 744 aaKnown RBP20.84■□□□□ 0.93
TOP3A-219ENST00000584887 NEK3P51956 506 aa20.84■□□□□ 0.93
TOP3A-219ENST00000584887 JAM2P57087 298 aa20.84■□□□□ 0.93
TOP3A-219ENST00000584887 CLDN2P57739 230 aa20.84■□□□□ 0.93
TOP3A-219ENST00000584887 ARF5P84085 180 aa20.84■□□□□ 0.93
TOP3A-219ENST00000584887 MAPK8IP2Q13387 824 aaPredicted RBP20.84■□□□□ 0.93
TOP3A-219ENST00000584887 SYCP1Q15431 976 aa20.84■□□□□ 0.93
TOP3A-219ENST00000584887 CCDC14Q49A88 953 aa20.84■□□□□ 0.93
TOP3A-219ENST00000584887 ARTNQ5T4W7 220 aa20.84■□□□□ 0.93
TOP3A-219ENST00000584887 SFMBT2Q5VUG0 894 aa20.84■□□□□ 0.93
TOP3A-219ENST00000584887 NEK5Q6P3R8 708 aa20.84■□□□□ 0.93
TOP3A-219ENST00000584887 PDCD7Q8N8D1 485 aaKnown RBP20.84■□□□□ 0.93
TOP3A-219ENST00000584887 TMEM145Q8NBT3 493 aa20.84■□□□□ 0.93
TOP3A-219ENST00000584887 ANKRD20A12PQ8NF67 263 aa20.84■□□□□ 0.93
TOP3A-219ENST00000584887 HEPHQ9BQS7 1158 aa20.84■□□□□ 0.93
TOP3A-219ENST00000584887 HDAC8Q9BY41 377 aa20.84■□□□□ 0.93
TOP3A-219ENST00000584887 CEP44Q9C0F1 390 aa20.84■□□□□ 0.93
TOP3A-219ENST00000584887 PPARGC1AQ9UBK2 798 aaKnown RBP20.84■□□□□ 0.93
TOP3A-219ENST00000584887 DNAI1Q9UI46 699 aa20.84■□□□□ 0.93
TOP3A-219ENST00000584887 GPSM3Q9Y4H4 160 aa20.84■□□□□ 0.93
TOP3A-219ENST00000584887 HNRNPA2B1P22626 353 aaKnown RBP20.83■□□□□ 0.93
TOP3A-219ENST00000584887 CCNHP51946 323 aaPredicted RBP20.83■□□□□ 0.93
TOP3A-219ENST00000584887 COPB1P53618 953 aaKnown RBP20.83■□□□□ 0.93
TOP3A-219ENST00000584887 SLC20A2Q08357 652 aa20.83■□□□□ 0.93
TOP3A-219ENST00000584887 CAMK2BQ13554 666 aa20.83■□□□□ 0.93
TOP3A-219ENST00000584887 CARD16Q5EG05 197 aa20.83■□□□□ 0.93
TOP3A-219ENST00000584887 HES3Q5TGS1 186 aa20.83■□□□□ 0.93
TOP3A-219ENST00000584887 FBXL19Q6PCT2 694 aa20.83■□□□□ 0.93
TOP3A-219ENST00000584887 KANSL1Q7Z3B3 1105 aa20.83■□□□□ 0.93
TOP3A-219ENST00000584887 NEK11Q8NG66 645 aa20.83■□□□□ 0.93
TOP3A-219ENST00000584887 OR6K2Q8NGY2 324 aa20.83■□□□□ 0.93
TOP3A-219ENST00000584887 HNRNPLLQ8WVV9 542 aaKnown RBP20.83■□□□□ 0.93
TOP3A-219ENST00000584887 PCDHB18PQ96TA0 734 aa20.83■□□□□ 0.93
TOP3A-219ENST00000584887 ADAM22Q9P0K1 906 aa20.83■□□□□ 0.93
TOP3A-219ENST00000584887 ZFR2Q9UPR6 939 aaKnown RBP20.83■□□□□ 0.93
TOP3A-219ENST00000584887 SIK3Q9Y2K2 1263 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms