RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 ACSL1P33121 698 aa11.44□□□□□ -0.58
CCDC47-206ENST00000584112 CDH5P33151 784 aaPredicted RBP11.44□□□□□ -0.58
CCDC47-206ENST00000584112 SCNN1AP37088 669 aa11.44□□□□□ -0.58
CCDC47-206ENST00000584112 AFF3P51826 1226 aaKnown RBP11.44□□□□□ -0.58
CCDC47-206ENST00000584112 ERVPABLB-1P60509 514 aa11.44□□□□□ -0.58
CCDC47-206ENST00000584112 NME3Q13232 169 aa11.44□□□□□ -0.58
CCDC47-206ENST00000584112 KLHDC7AQ5VTJ3 777 aa11.44□□□□□ -0.58
CCDC47-206ENST00000584112 XKR5Q6UX68 686 aa11.44□□□□□ -0.58
CCDC47-206ENST00000584112 MMS22LQ6ZRQ5 1243 aa11.44□□□□□ -0.58
CCDC47-206ENST00000584112 SND1Q7KZF4 910 aaKnown RBP eCLIP11.44□□□□□ -0.582e-11■■■■□ 23.1
CCDC47-206ENST00000584112 MMP21Q8N119 569 aa11.44□□□□□ -0.58
CCDC47-206ENST00000584112 CCAR2Q8N163 923 aaKnown RBP11.44□□□□□ -0.58
CCDC47-206ENST00000584112 C1orf216Q8TAB5 229 aa11.44□□□□□ -0.58
CCDC47-206ENST00000584112 GANCQ8TET4 914 aa11.44□□□□□ -0.58
CCDC47-206ENST00000584112 MRGPRX3Q96LB0 322 aa11.44□□□□□ -0.58
CCDC47-206ENST00000584112 RPRD1AQ96P16 312 aaPredicted RBP11.44□□□□□ -0.58
CCDC47-206ENST00000584112 GBP4Q96PP9 640 aa11.44□□□□□ -0.58
CCDC47-206ENST00000584112 SLC25A18Q9H1K4 315 aa11.44□□□□□ -0.58
CCDC47-206ENST00000584112 PABPC3Q9H361 631 aaKnown RBP11.44□□□□□ -0.58
CCDC47-206ENST00000584112 C6orf106Q9H6K1 298 aaPredicted RBP11.44□□□□□ -0.58
CCDC47-206ENST00000584112 OSGEPQ9NPF4 335 aa11.44□□□□□ -0.58
CCDC47-206ENST00000584112 SAMSN1Q9NSI8 373 aaKnown RBP11.44□□□□□ -0.58
CCDC47-206ENST00000584112 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.44□□□□□ -0.58
CCDC47-206ENST00000584112 FHOD1Q9Y613 1164 aa11.44□□□□□ -0.58
CCDC47-206ENST00000584112 WIPF3A6NGB9 483 aa11.43□□□□□ -0.58
CCDC47-206ENST00000584112 TTC34A8MYJ7 566 aa11.43□□□□□ -0.58
CCDC47-206ENST00000584112 M0QYT0 321 aa11.43□□□□□ -0.58
CCDC47-206ENST00000584112 DXOO77932 396 aaKnown RBP11.43□□□□□ -0.58
CCDC47-206ENST00000584112 LSM8O95777 96 aaKnown RBP11.43□□□□□ -0.58
CCDC47-206ENST00000584112 ADH1BP00325 375 aa11.43□□□□□ -0.58
CCDC47-206ENST00000584112 F9P00740 461 aa11.43□□□□□ -0.58
CCDC47-206ENST00000584112 CDK4P11802 303 aa11.43□□□□□ -0.58
CCDC47-206ENST00000584112 UCHL3P15374 230 aa11.43□□□□□ -0.58
CCDC47-206ENST00000584112 CYP11B1P15538 503 aa11.43□□□□□ -0.58
CCDC47-206ENST00000584112 CTSOP43234 321 aaPredicted RBP11.43□□□□□ -0.58
CCDC47-206ENST00000584112 GABRB2P47870 512 aa11.43□□□□□ -0.58
CCDC47-206ENST00000584112 PLK1P53350 603 aa11.43□□□□□ -0.58
CCDC47-206ENST00000584112 KCNMA1Q12791 1236 aa11.43□□□□□ -0.58
CCDC47-206ENST00000584112 TEAD4Q15561 434 aa11.43□□□□□ -0.58
CCDC47-206ENST00000584112 CST6Q15828 149 aa11.43□□□□□ -0.58
CCDC47-206ENST00000584112 BRMS1LQ5PSV4 323 aa11.43□□□□□ -0.58
CCDC47-206ENST00000584112 PRAMEF14Q5SWL7 426 aa11.43□□□□□ -0.58
CCDC47-206ENST00000584112 ACBD5Q5T8D3 534 aaPredicted RBP11.43□□□□□ -0.58
CCDC47-206ENST00000584112 DPY19L2P1Q6NXN4 242 aa11.43□□□□□ -0.58
CCDC47-206ENST00000584112 FBXL22Q6P050 247 aa11.43□□□□□ -0.58
CCDC47-206ENST00000584112 APCDD1Q8J025 514 aa11.43□□□□□ -0.58
CCDC47-206ENST00000584112 ZNF564Q8TBZ8 553 aaPredicted RBP11.43□□□□□ -0.58
CCDC47-206ENST00000584112 ENOX1Q8TC92 643 aaKnown RBP11.43□□□□□ -0.58
CCDC47-206ENST00000584112 C18orf8Q96DM3 657 aa11.43□□□□□ -0.58
CCDC47-206ENST00000584112 NAA15Q9BXJ9 866 aaKnown RBP11.43□□□□□ -0.58
CCDC47-206ENST00000584112 STK33Q9BYT3 514 aa11.43□□□□□ -0.58
CCDC47-206ENST00000584112 PLCB1Q9NQ66 1216 aa11.43□□□□□ -0.58
CCDC47-206ENST00000584112 LMBRD1Q9NUN5 540 aa11.43□□□□□ -0.58
CCDC47-206ENST00000584112 FBXL12Q9NXK8 326 aa11.43□□□□□ -0.58
CCDC47-206ENST00000584112 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.43□□□□□ -0.58
CCDC47-206ENST00000584112 SLC25A13Q9UJS0 675 aa11.43□□□□□ -0.58
CCDC47-206ENST00000584112 VANGL2Q9ULK5 521 aa11.43□□□□□ -0.58
CCDC47-206ENST00000584112 FZD4Q9ULV1 537 aa11.43□□□□□ -0.58
CCDC47-206ENST00000584112 ANKRD6Q9Y2G4 727 aa11.43□□□□□ -0.58
CCDC47-206ENST00000584112 DAAM1Q9Y4D1 1078 aa11.43□□□□□ -0.58
CCDC47-206ENST00000584112 KIF26BQ2KJY2 2108 aa11.42□□□□□ -0.58
CCDC47-206ENST00000584112 NBEAL1Q6ZS30 2694 aa11.42□□□□□ -0.58
CCDC47-206ENST00000584112 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.42□□□□□ -0.58
CCDC47-206ENST00000584112 LRRC72A6NJI9 287 aa11.42□□□□□ -0.58
CCDC47-206ENST00000584112 F8VZ95 297 aa11.42□□□□□ -0.58
CCDC47-206ENST00000584112 GOLGA6L22H0YM25 854 aa11.42□□□□□ -0.58
CCDC47-206ENST00000584112 MID1O15344 667 aa11.42□□□□□ -0.58
CCDC47-206ENST00000584112 PAGE1O75459 146 aa11.42□□□□□ -0.58
CCDC47-206ENST00000584112 CLDN11O75508 207 aa11.42□□□□□ -0.58
CCDC47-206ENST00000584112 FSBPO95073 299 aa11.42□□□□□ -0.58
CCDC47-206ENST00000584112 MT-CO3P00414 261 aa11.42□□□□□ -0.58
CCDC47-206ENST00000584112 SFTPCP11686 197 aa11.42□□□□□ -0.58
CCDC47-206ENST00000584112 PDGFRAP16234 1089 aa11.42□□□□□ -0.58
CCDC47-206ENST00000584112 CD27P26842 260 aa11.42□□□□□ -0.58
CCDC47-206ENST00000584112 GRIA4P48058 902 aa11.42□□□□□ -0.58
CCDC47-206ENST00000584112 SULT1E1P49888 294 aa11.42□□□□□ -0.58
CCDC47-206ENST00000584112 RNASE9P60153 205 aaKnown RBP11.42□□□□□ -0.58
CCDC47-206ENST00000584112 SRSF6Q13247 344 aaKnown RBP11.42□□□□□ -0.58
CCDC47-206ENST00000584112 CLN3Q13286 438 aa11.42□□□□□ -0.58
CCDC47-206ENST00000584112 ZNF177Q13360 481 aaPredicted RBP11.42□□□□□ -0.58
CCDC47-206ENST00000584112 AUHQ13825 339 aaKnown RBP11.42□□□□□ -0.58
CCDC47-206ENST00000584112 ELAVL3Q14576 367 aaKnown RBP11.42□□□□□ -0.58
CCDC47-206ENST00000584112 CLCA4Q14CN2 919 aa11.42□□□□□ -0.58
CCDC47-206ENST00000584112 INAVAQ3KP66 663 aa11.42□□□□□ -0.58
CCDC47-206ENST00000584112 C9orf64Q5T6V5 341 aa11.42□□□□□ -0.58
CCDC47-206ENST00000584112 FAM102AQ5T9C2 384 aaPredicted RBP11.42□□□□□ -0.58
CCDC47-206ENST00000584112 CXorf57Q6NSI4 855 aaKnown RBP11.42□□□□□ -0.58
CCDC47-206ENST00000584112 DSG4Q86SJ6 1040 aa11.42□□□□□ -0.58
CCDC47-206ENST00000584112 CIR1Q86X95 450 aaPredicted RBP11.42□□□□□ -0.58
CCDC47-206ENST00000584112 ZNF677Q86XU0 584 aa11.42□□□□□ -0.58
CCDC47-206ENST00000584112 MMAAQ8IVH4 418 aaKnown RBP11.42□□□□□ -0.58
CCDC47-206ENST00000584112 BIRC7Q96CA5 298 aa11.42□□□□□ -0.58
CCDC47-206ENST00000584112 PGAP3Q96FM1 320 aaPredicted RBP11.42□□□□□ -0.58
CCDC47-206ENST00000584112 RPL10LQ96L21 214 aaKnown RBP11.42□□□□□ -0.58
CCDC47-206ENST00000584112 NPY6RQ99463 290 aa11.42□□□□□ -0.58
CCDC47-206ENST00000584112 OMDQ99983 421 aa11.42□□□□□ -0.58
CCDC47-206ENST00000584112 MTG2Q9H4K7 406 aa11.42□□□□□ -0.58
CCDC47-206ENST00000584112 WDCPQ9H6R7 721 aa11.42□□□□□ -0.58
CCDC47-206ENST00000584112 TAB2Q9NYJ8 693 aa11.42□□□□□ -0.58
CCDC47-206ENST00000584112 ADAMTS1Q9UHI8 967 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms