RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 KYAT3Q6YP21 454 aaKnown RBP23.04■■□□□ 1.28
CCDC47-204ENST00000582252 DDX53Q86TM3 631 aaKnown RBP23.04■■□□□ 1.28
CCDC47-204ENST00000582252 GIPC2Q8TF65 315 aa23.04■■□□□ 1.28
CCDC47-204ENST00000582252 PTCD2Q8WV60 388 aaKnown RBP23.04■■□□□ 1.28
CCDC47-204ENST00000582252 FCRL3Q96P31 734 aaPredicted RBP23.04■■□□□ 1.28
CCDC47-204ENST00000582252 TSSK1BQ9BXA7 367 aa23.04■■□□□ 1.28
CCDC47-204ENST00000582252 RETREG1Q9H6L5 497 aa23.04■■□□□ 1.28
CCDC47-204ENST00000582252 SP110Q9HB58 689 aa23.04■■□□□ 1.28
CCDC47-204ENST00000582252 ABCF3Q9NUQ8 709 aa23.04■■□□□ 1.28
CCDC47-204ENST00000582252 UBP1Q9NZI7 540 aa23.04■■□□□ 1.28
CCDC47-204ENST00000582252 PLXNA4Q9HCM2 1894 aa23.03■■□□□ 1.28
CCDC47-204ENST00000582252 HMX2A2RU54 273 aa23.03■■□□□ 1.28
CCDC47-204ENST00000582252 DRGXA6NNA5 263 aa23.03■■□□□ 1.28
CCDC47-204ENST00000582252 DCTN3O75935 186 aa23.03■■□□□ 1.28
CCDC47-204ENST00000582252 TBX18O95935 607 aa23.03■■□□□ 1.28
CCDC47-204ENST00000582252 HLA-DQB2P05538 268 aa23.03■■□□□ 1.28
CCDC47-204ENST00000582252 LINC00271P0C7V0 271 aa23.03■■□□□ 1.28
CCDC47-204ENST00000582252 ERVK-10P10266 1014 aa23.03■■□□□ 1.28
CCDC47-204ENST00000582252 MPP3Q13368 585 aa23.03■■□□□ 1.28
CCDC47-204ENST00000582252 PCID2Q5JVF3 399 aa23.03■■□□□ 1.28
CCDC47-204ENST00000582252 RAP1GAP2Q684P5 730 aa23.03■■□□□ 1.28
CCDC47-204ENST00000582252 OTOAQ7RTW8 1153 aa23.03■■□□□ 1.28
CCDC47-204ENST00000582252 KIFC1Q9BW19 673 aa23.03■■□□□ 1.28
CCDC47-204ENST00000582252 FSD1LQ9BXM9 530 aa23.03■■□□□ 1.28
CCDC47-204ENST00000582252 AFF4Q9UHB7 1163 aaKnown RBP23.03■■□□□ 1.28
CCDC47-204ENST00000582252 DCDC2Q9UHG0 476 aa23.03■■□□□ 1.28
CCDC47-204ENST00000582252 MAGED2Q9UNF1 606 aaPredicted RBP23.03■■□□□ 1.28
CCDC47-204ENST00000582252 ZCWPW2A0A1B0GU75 182 aa23.02■■□□□ 1.28
CCDC47-204ENST00000582252 BIRC5O15392 142 aa23.02■■□□□ 1.28
CCDC47-204ENST00000582252 ATF6P18850 670 aa23.02■■□□□ 1.28
CCDC47-204ENST00000582252 MAPKAPK2P49137 400 aa23.02■■□□□ 1.28
CCDC47-204ENST00000582252 CSE1LP55060 971 aaKnown RBP23.02■■□□□ 1.28
CCDC47-204ENST00000582252 PDPK2PQ6A1A2 396 aa23.02■■□□□ 1.28
CCDC47-204ENST00000582252 POTEHQ6S545 545 aa23.02■■□□□ 1.28
CCDC47-204ENST00000582252 CES3Q6UWW8 571 aa23.02■■□□□ 1.28
CCDC47-204ENST00000582252 PPHLN1Q8NEY8 458 aaKnown RBP23.02■■□□□ 1.28
CCDC47-204ENST00000582252 IPMKQ8NFU5 416 aa23.02■■□□□ 1.28
CCDC47-204ENST00000582252 APOL2Q9BQE5 337 aa23.02■■□□□ 1.28
CCDC47-204ENST00000582252 SLC25A51Q9H1U9 297 aa23.02■■□□□ 1.28
CCDC47-204ENST00000582252 C12orf65Q9H3J6 166 aaKnown RBP23.02■■□□□ 1.28
CCDC47-204ENST00000582252 DNMT3LQ9UJW3 386 aa23.02■■□□□ 1.28
CCDC47-204ENST00000582252 SLC12A4Q9UP95 1085 aa23.02■■□□□ 1.28
CCDC47-204ENST00000582252 DNAJC8O75937 253 aaPredicted RBP23.02■■□□□ 1.28
CCDC47-204ENST00000582252 URODP06132 367 aa23.02■■□□□ 1.28
CCDC47-204ENST00000582252 HMBSP08397 361 aa23.02■■□□□ 1.28
CCDC47-204ENST00000582252 OR1D2P34982 312 aa23.02■■□□□ 1.28
CCDC47-204ENST00000582252 ATP5C1P36542 298 aaKnown RBP23.02■■□□□ 1.28
CCDC47-204ENST00000582252 YBEYP58557 167 aaPredicted RBP23.02■■□□□ 1.28
CCDC47-204ENST00000582252 DSG1Q02413 1049 aa23.02■■□□□ 1.28
CCDC47-204ENST00000582252 INSCQ1MX18 579 aa23.02■■□□□ 1.28
CCDC47-204ENST00000582252 PARP15Q460N3 678 aa23.02■■□□□ 1.28
CCDC47-204ENST00000582252 FBXL22Q6P050 247 aa23.02■■□□□ 1.28
CCDC47-204ENST00000582252 CDHR3Q6ZTQ4 885 aa23.02■■□□□ 1.28
CCDC47-204ENST00000582252 TFAP2DQ7Z6R9 452 aa23.02■■□□□ 1.28
CCDC47-204ENST00000582252 KCNMB4Q86W47 210 aa23.02■■□□□ 1.28
CCDC47-204ENST00000582252 SPATA22Q8NHS9 363 aa23.02■■□□□ 1.28
CCDC47-204ENST00000582252 RPRD1AQ96P16 312 aaPredicted RBP23.02■■□□□ 1.28
CCDC47-204ENST00000582252 RBBP8Q99708 897 aa23.02■■□□□ 1.28
CCDC47-204ENST00000582252 FICDQ9BVA6 458 aa23.02■■□□□ 1.28
CCDC47-204ENST00000582252 TRIM55Q9BYV6 548 aa23.02■■□□□ 1.28
CCDC47-204ENST00000582252 MRM3Q9HC36 420 aaKnown RBP23.02■■□□□ 1.28
CCDC47-204ENST00000582252 RWDD3Q9Y3V2 267 aa23.02■■□□□ 1.28
CCDC47-204ENST00000582252 TPP1O14773 563 aa23.01■■□□□ 1.27
CCDC47-204ENST00000582252 TIMM44O43615 452 aa23.01■■□□□ 1.27
CCDC47-204ENST00000582252 FGF18O76093 207 aa23.01■■□□□ 1.27
CCDC47-204ENST00000582252 TGDSO95455 350 aa23.01■■□□□ 1.27
CCDC47-204ENST00000582252 HADHAP40939 763 aa23.01■■□□□ 1.27
CCDC47-204ENST00000582252 SERPINB8P50452 374 aa23.01■■□□□ 1.27
CCDC47-204ENST00000582252 C9orf50Q5SZB4 431 aa23.01■■□□□ 1.27
CCDC47-204ENST00000582252 MARC1Q5VT66 337 aa23.01■■□□□ 1.27
CCDC47-204ENST00000582252 SNX30Q5VWJ9 437 aa23.01■■□□□ 1.27
CCDC47-204ENST00000582252 TPGS2Q68CL5 300 aa23.01■■□□□ 1.27
CCDC47-204ENST00000582252 GPR65Q8IYL9 337 aa23.01■■□□□ 1.27
CCDC47-204ENST00000582252 ARMC2Q8NEN0 867 aa23.01■■□□□ 1.27
CCDC47-204ENST00000582252 HMCESQ96FZ2 354 aa23.01■■□□□ 1.27
CCDC47-204ENST00000582252 NACA2Q9H009 215 aa23.01■■□□□ 1.27
CCDC47-204ENST00000582252 NOL6Q9H6R4 1146 aaKnown RBP23.01■■□□□ 1.27
CCDC47-204ENST00000582252 CCSER2Q9H7U1 834 aa23.01■■□□□ 1.27
CCDC47-204ENST00000582252 C20orf96Q9NUD7 363 aaPredicted RBP23.01■■□□□ 1.27
CCDC47-204ENST00000582252 F5H5T6 163 aa23■■□□□ 1.27
CCDC47-204ENST00000582252 RAMP2O60895 175 aa23■■□□□ 1.27
CCDC47-204ENST00000582252 MT-CYBP00156 380 aaPredicted RBP23■■□□□ 1.27
CCDC47-204ENST00000582252 LIMK2P53671 638 aa23■■□□□ 1.27
CCDC47-204ENST00000582252 TEDDM1Q5T9Z0 273 aa23■■□□□ 1.27
CCDC47-204ENST00000582252 PKN3Q6P5Z2 889 aa23■■□□□ 1.27
CCDC47-204ENST00000582252 CCDC91Q7Z6B0 441 aa23■■□□□ 1.27
CCDC47-204ENST00000582252 STRA8Q7Z7C7 330 aa23■■□□□ 1.27
CCDC47-204ENST00000582252 ZNF354CQ86Y25 554 aa23■■□□□ 1.27
CCDC47-204ENST00000582252 MFSD3Q96ES6 412 aa23■■□□□ 1.27
CCDC47-204ENST00000582252 CHRAC1Q9NRG0 131 aa23■■□□□ 1.27
CCDC47-204ENST00000582252 VPS45Q9NRW7 570 aa23■■□□□ 1.27
CCDC47-204ENST00000582252 LCHNA4D1U4 455 aa22.99■■□□□ 1.27
CCDC47-204ENST00000582252 TPH1P17752 444 aa22.99■■□□□ 1.27
CCDC47-204ENST00000582252 PAMP19021 973 aa22.99■■□□□ 1.27
CCDC47-204ENST00000582252 TACR2P21452 398 aa22.99■■□□□ 1.27
CCDC47-204ENST00000582252 BGNP21810 368 aa22.99■■□□□ 1.27
CCDC47-204ENST00000582252 ADRA1AP35348 466 aa22.99■■□□□ 1.27
CCDC47-204ENST00000582252 IL10RBQ08334 325 aa22.99■■□□□ 1.27
CCDC47-204ENST00000582252 POLD3Q15054 466 aaPredicted RBP22.99■■□□□ 1.27
CCDC47-204ENST00000582252 ALFQ53S48 1182 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms