RNA–Protein interactions for RNA: ENST00000581977.6

IKBKE-203, Transcript of inhibitor of nuclear factor kappa B kinase subunit epsilon, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IKBKE, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKE-203ENST00000581977 LOC105371267A0A1B0GV96 52 aa12.09□□□□□ -0.47
IKBKE-203ENST00000581977 PRORSD1PA6NEY8 169 aa12.09□□□□□ -0.47
IKBKE-203ENST00000581977 FAM159BA6NKW6 160 aa12.09□□□□□ -0.47
IKBKE-203ENST00000581977 SNPHO15079 494 aa12.09□□□□□ -0.47
IKBKE-203ENST00000581977 PMM2O15305 246 aa12.09□□□□□ -0.47
IKBKE-203ENST00000581977 CHADO15335 359 aa12.09□□□□□ -0.47
IKBKE-203ENST00000581977 MFN2O95140 757 aa12.09□□□□□ -0.47
IKBKE-203ENST00000581977 HLA-DRAP01903 254 aa12.09□□□□□ -0.47
IKBKE-203ENST00000581977 KRT3P12035 628 aa12.09□□□□□ -0.47
IKBKE-203ENST00000581977 TMBIM6P55061 237 aa12.09□□□□□ -0.47
IKBKE-203ENST00000581977 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.09□□□□□ -0.47
IKBKE-203ENST00000581977 FAM102BQ5T8I3 360 aa12.09□□□□□ -0.47
IKBKE-203ENST00000581977 WDR78Q5VTH9 848 aa12.09□□□□□ -0.47
IKBKE-203ENST00000581977 FBXO11Q86XK2 927 aa12.09□□□□□ -0.47
IKBKE-203ENST00000581977 OR13F1Q8NGS4 319 aa12.09□□□□□ -0.47
IKBKE-203ENST00000581977 PKD2L2Q9NZM6 624 aa12.09□□□□□ -0.47
IKBKE-203ENST00000581977 MTRRQ9UBK8 725 aa12.09□□□□□ -0.47
IKBKE-203ENST00000581977 FIS1Q9Y3D6 152 aa12.09□□□□□ -0.47
IKBKE-203ENST00000581977 IGLV3-22A0A075B6J6 115 aa12.09□□□□□ -0.47
IKBKE-203ENST00000581977 TCAF2A6NFQ2 919 aa12.09□□□□□ -0.47
IKBKE-203ENST00000581977 APOC4-APOC2K7ER74 178 aa12.09□□□□□ -0.47
IKBKE-203ENST00000581977 SYNCRIPO60506 623 aaKnown RBP12.09□□□□□ -0.47
IKBKE-203ENST00000581977 APOC2P02655 101 aa12.09□□□□□ -0.47
IKBKE-203ENST00000581977 JUNP05412 331 aaKnown RBP12.09□□□□□ -0.47
IKBKE-203ENST00000581977 CDH1P12830 882 aa12.09□□□□□ -0.47
IKBKE-203ENST00000581977 ELK4P28324 431 aa12.09□□□□□ -0.47
IKBKE-203ENST00000581977 IFNA8P32881 189 aa12.09□□□□□ -0.47
IKBKE-203ENST00000581977 PTPN7P35236 360 aa12.09□□□□□ -0.47
IKBKE-203ENST00000581977 SOX11P35716 441 aa12.09□□□□□ -0.47
IKBKE-203ENST00000581977 ABCG1P45844 678 aa12.09□□□□□ -0.47
IKBKE-203ENST00000581977 AP3M2P53677 418 aa12.09□□□□□ -0.47
IKBKE-203ENST00000581977 LSM3P62310 102 aaKnown RBP12.09□□□□□ -0.47
IKBKE-203ENST00000581977 SEL1L3Q68CR1 1132 aa12.09□□□□□ -0.47
IKBKE-203ENST00000581977 SLCO6A1Q86UG4 719 aa12.09□□□□□ -0.47
IKBKE-203ENST00000581977 PIGZQ86VD9 579 aa12.09□□□□□ -0.47
IKBKE-203ENST00000581977 LDHDQ86WU2 507 aa12.09□□□□□ -0.47
IKBKE-203ENST00000581977 GALNT13Q8IUC8 556 aa12.09□□□□□ -0.47
IKBKE-203ENST00000581977 C12orf56Q8IXR9 622 aa12.09□□□□□ -0.47
IKBKE-203ENST00000581977 PLD6Q8N2A8 252 aaKnown RBP12.09□□□□□ -0.47
IKBKE-203ENST00000581977 TTC39CQ8N584 583 aa12.09□□□□□ -0.47
IKBKE-203ENST00000581977 ZNF606Q8WXB4 792 aa12.09□□□□□ -0.47
IKBKE-203ENST00000581977 ZNF516Q92618 1163 aa12.09□□□□□ -0.47
IKBKE-203ENST00000581977 CDK5RAP1Q96SZ6 601 aaKnown RBP12.09□□□□□ -0.47
IKBKE-203ENST00000581977 ZNF577Q9BSK1 485 aa12.09□□□□□ -0.47
IKBKE-203ENST00000581977 RGPD3A6NKT7 1758 aaPredicted RBP12.08□□□□□ -0.48
IKBKE-203ENST00000581977 RGPD4Q7Z3J3 1758 aa12.08□□□□□ -0.48
IKBKE-203ENST00000581977 HEATR9A2RTY3 570 aa12.08□□□□□ -0.48
IKBKE-203ENST00000581977 GOLGA8CPA6NN73 597 aa12.08□□□□□ -0.48
IKBKE-203ENST00000581977 IDH3BO43837 385 aa12.08□□□□□ -0.48
IKBKE-203ENST00000581977 NUAK1O60285 661 aa12.08□□□□□ -0.48
IKBKE-203ENST00000581977 XYLBO75191 536 aa12.08□□□□□ -0.48
IKBKE-203ENST00000581977 LRCH4O75427 683 aa12.08□□□□□ -0.48
IKBKE-203ENST00000581977 STAM2O75886 525 aa12.08□□□□□ -0.48
IKBKE-203ENST00000581977 FOSP01100 380 aaPredicted RBP12.08□□□□□ -0.48
IKBKE-203ENST00000581977 ARP10275 920 aa12.08□□□□□ -0.48
IKBKE-203ENST00000581977 GARTP22102 1010 aa12.08□□□□□ -0.48
IKBKE-203ENST00000581977 LIG4P49917 911 aa12.08□□□□□ -0.48
IKBKE-203ENST00000581977 RACK1P63244 317 aaKnown RBP12.08□□□□□ -0.48
IKBKE-203ENST00000581977 CYP24A1Q07973 514 aa12.08□□□□□ -0.48
IKBKE-203ENST00000581977 GRSF1Q12849 480 aaKnown RBP eCLIP12.08□□□□□ -0.48
IKBKE-203ENST00000581977 AQP6Q13520 282 aa12.08□□□□□ -0.48
IKBKE-203ENST00000581977 POLD3Q15054 466 aaPredicted RBP12.08□□□□□ -0.48
IKBKE-203ENST00000581977 GPR162Q16538 588 aa12.08□□□□□ -0.48
IKBKE-203ENST00000581977 HADHQ16836 314 aaKnown RBP12.08□□□□□ -0.48
IKBKE-203ENST00000581977 LRIT3Q3SXY7 679 aa12.08□□□□□ -0.48
IKBKE-203ENST00000581977 CEP78Q5JTW2 689 aa12.08□□□□□ -0.48
IKBKE-203ENST00000581977 GLRA4Q5JXX5 417 aa12.08□□□□□ -0.48
IKBKE-203ENST00000581977 TBCELQ5QJ74 424 aa12.08□□□□□ -0.48
IKBKE-203ENST00000581977 TMTC4Q5T4D3 741 aa12.08□□□□□ -0.48
IKBKE-203ENST00000581977 RSBN1Q5VWQ0 802 aaPredicted RBP12.08□□□□□ -0.48
IKBKE-203ENST00000581977 CRTC3Q6UUV7 619 aa12.08□□□□□ -0.48
IKBKE-203ENST00000581977 KIAA0319LQ8IZA0 1049 aa12.08□□□□□ -0.48
IKBKE-203ENST00000581977 RAB2BQ8WUD1 216 aa12.08□□□□□ -0.48
IKBKE-203ENST00000581977 SGCDQ92629 289 aa12.08□□□□□ -0.48
IKBKE-203ENST00000581977 SLC39A3Q9BRY0 314 aa12.08□□□□□ -0.48
IKBKE-203ENST00000581977 ILKAPQ9H0C8 392 aaPredicted RBP12.08□□□□□ -0.48
IKBKE-203ENST00000581977 ADNPQ9H2P0 1102 aa12.08□□□□□ -0.48
IKBKE-203ENST00000581977 RMND5AQ9H871 391 aa12.08□□□□□ -0.48
IKBKE-203ENST00000581977 VRTNQ9H8Y1 702 aa12.08□□□□□ -0.48
IKBKE-203ENST00000581977 PLEKHA5Q9HAU0 1116 aa12.08□□□□□ -0.48
IKBKE-203ENST00000581977 ZNF277Q9NRM2 450 aaPredicted RBP12.08□□□□□ -0.48
IKBKE-203ENST00000581977 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.08□□□□□ -0.48
IKBKE-203ENST00000581977 SYNPO2Q9UMS6 1093 aa12.08□□□□□ -0.48
IKBKE-203ENST00000581977 CDK5RAP2Q96SN8 1893 aa12.08□□□□□ -0.48
IKBKE-203ENST00000581977 GPR25O00155 361 aa12.08□□□□□ -0.48
IKBKE-203ENST00000581977 HOXC11O43248 304 aaPredicted RBP12.08□□□□□ -0.48
IKBKE-203ENST00000581977 PAPSS1O43252 624 aaPredicted RBP12.08□□□□□ -0.48
IKBKE-203ENST00000581977 LTFP02788 710 aa12.08□□□□□ -0.48
IKBKE-203ENST00000581977 NPR1P16066 1061 aa12.08□□□□□ -0.48
IKBKE-203ENST00000581977 RBL1P28749 1068 aa12.08□□□□□ -0.48
IKBKE-203ENST00000581977 ALDH4A1P30038 563 aa12.08□□□□□ -0.48
IKBKE-203ENST00000581977 SEPHS1P49903 392 aa12.08□□□□□ -0.48
IKBKE-203ENST00000581977 SLC36A3Q495N2 470 aa12.08□□□□□ -0.48
IKBKE-203ENST00000581977 ARFGAP1Q8N6T3 406 aa12.08□□□□□ -0.48
IKBKE-203ENST00000581977 JOSD2Q8TAC2 188 aa12.08□□□□□ -0.48
IKBKE-203ENST00000581977 NRBF2Q96F24 287 aa12.08□□□□□ -0.48
IKBKE-203ENST00000581977 MXRA8Q9BRK3 442 aa12.08□□□□□ -0.48
IKBKE-203ENST00000581977 WDR12Q9GZL7 423 aaKnown RBP12.08□□□□□ -0.48
IKBKE-203ENST00000581977 MIR1-1HGQ9H1L0 117 aa12.08□□□□□ -0.48
IKBKE-203ENST00000581977 DHX35Q9H5Z1 703 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms