RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 SRSF1Q07955 248 aaKnown RBP eCLIP19.57■□□□□ 0.72
NDEL1-209ENST00000580738 CCDC15Q0P6D6 951 aa19.57■□□□□ 0.72
NDEL1-209ENST00000580738 MAPK8IP2Q13387 824 aaPredicted RBP19.57■□□□□ 0.72
NDEL1-209ENST00000580738 TPRG1LQ5T0D9 272 aa19.57■□□□□ 0.72
NDEL1-209ENST00000580738 ERN2Q76MJ5 926 aaKnown RBP19.57■□□□□ 0.72
NDEL1-209ENST00000580738 C14orf80Q86SX3 495 aa19.57■□□□□ 0.72
NDEL1-209ENST00000580738 CLEC14AQ86T13 490 aa19.57■□□□□ 0.72
NDEL1-209ENST00000580738 TMEM110Q86TL2 294 aa19.57■□□□□ 0.72
NDEL1-209ENST00000580738 DCP2Q8IU60 420 aaKnown RBP19.57■□□□□ 0.72
NDEL1-209ENST00000580738 ARL14Q8N4G2 192 aa19.57■□□□□ 0.72
NDEL1-209ENST00000580738 ATP11CQ8NB49 1132 aa19.57■□□□□ 0.72
NDEL1-209ENST00000580738 GRIN3AQ8TCU5 1115 aa19.57■□□□□ 0.72
NDEL1-209ENST00000580738 STK32AQ8WU08 396 aa19.57■□□□□ 0.72
NDEL1-209ENST00000580738 CCNL2Q96S94 520 aaPredicted RBP19.57■□□□□ 0.72
NDEL1-209ENST00000580738 PSMB7Q99436 277 aa19.57■□□□□ 0.72
NDEL1-209ENST00000580738 TSG101Q99816 390 aa19.57■□□□□ 0.72
NDEL1-209ENST00000580738 SLC17A9Q9BYT1 436 aa19.57■□□□□ 0.72
NDEL1-209ENST00000580738 FAM117AQ9C073 453 aa19.57■□□□□ 0.72
NDEL1-209ENST00000580738 MUC3BQ9H195 1237 aa19.57■□□□□ 0.72
NDEL1-209ENST00000580738 THAP9Q9H5L6 903 aa19.57■□□□□ 0.72
NDEL1-209ENST00000580738 DYRK4Q9NR20 520 aa19.57■□□□□ 0.72
NDEL1-209ENST00000580738 TBC1D30Q9Y2I9 924 aa19.57■□□□□ 0.72
NDEL1-209ENST00000580738 CSNK1G3Q9Y6M4 447 aa19.57■□□□□ 0.72
NDEL1-209ENST00000580738 TRIM49BA6NDI0 452 aa19.56■□□□□ 0.72
NDEL1-209ENST00000580738 MUSKO15146 869 aa19.56■□□□□ 0.72
NDEL1-209ENST00000580738 AQP9O43315 295 aa19.56■□□□□ 0.72
NDEL1-209ENST00000580738 SLC2A3P11169 496 aa19.56■□□□□ 0.72
NDEL1-209ENST00000580738 LINC00303Q3SY05 128 aa19.56■□□□□ 0.72
NDEL1-209ENST00000580738 ARSIQ5FYB1 569 aa19.56■□□□□ 0.72
NDEL1-209ENST00000580738 KYAT3Q6YP21 454 aaKnown RBP19.56■□□□□ 0.72
NDEL1-209ENST00000580738 PARGQ86W56 976 aa19.56■□□□□ 0.72
NDEL1-209ENST00000580738 WDR36Q8NI36 951 aaKnown RBP19.56■□□□□ 0.72
NDEL1-209ENST00000580738 LMX1AQ8TE12 382 aa19.56■□□□□ 0.72
NDEL1-209ENST00000580738 MED15Q96RN5 788 aa19.56■□□□□ 0.72
NDEL1-209ENST00000580738 HDAC8Q9BY41 377 aa19.56■□□□□ 0.72
NDEL1-209ENST00000580738 TNKS2Q9H2K2 1166 aa19.56■□□□□ 0.72
NDEL1-209ENST00000580738 METTL14Q9HCE5 456 aaKnown RBP19.56■□□□□ 0.72
NDEL1-209ENST00000580738 WDR70Q9NW82 654 aa19.56■□□□□ 0.72
NDEL1-209ENST00000580738 NCKIPSDQ9NZQ3 722 aa19.56■□□□□ 0.72
NDEL1-209ENST00000580738 VPS51Q9UID3 782 aa19.56■□□□□ 0.72
NDEL1-209ENST00000580738 HEMK1Q9Y5R4 338 aaPredicted RBP19.56■□□□□ 0.72
NDEL1-209ENST00000580738 HS3ST4Q9Y661 456 aa19.56■□□□□ 0.72
NDEL1-209ENST00000580738 H3BM21 787 aa19.55■□□□□ 0.72
NDEL1-209ENST00000580738 SPINT1O43278 529 aa19.55■□□□□ 0.72
NDEL1-209ENST00000580738 CLDN11O75508 207 aa19.55■□□□□ 0.72
NDEL1-209ENST00000580738 CNTN5O94779 1100 aa19.55■□□□□ 0.72
NDEL1-209ENST00000580738 ZNF202O95125 648 aa19.55■□□□□ 0.72
NDEL1-209ENST00000580738 PRNPP04156 253 aa19.55■□□□□ 0.72
NDEL1-209ENST00000580738 PDX1P52945 283 aa19.55■□□□□ 0.72
NDEL1-209ENST00000580738 CDK17Q00537 523 aa19.55■□□□□ 0.72
NDEL1-209ENST00000580738 NFKB2Q00653 900 aa19.55■□□□□ 0.72
NDEL1-209ENST00000580738 LINGO4Q6UY18 593 aa19.55■□□□□ 0.72
NDEL1-209ENST00000580738 DEFB106AQ8N104 65 aa19.55■□□□□ 0.72
NDEL1-209ENST00000580738 TPCN2Q8NHX9 752 aa19.55■□□□□ 0.72
NDEL1-209ENST00000580738 FAM174AQ8TBP5 190 aa19.55■□□□□ 0.72
NDEL1-209ENST00000580738 CCDC114Q96M63 670 aa19.55■□□□□ 0.72
NDEL1-209ENST00000580738 KREMEN1Q96MU8 473 aa19.55■□□□□ 0.72
NDEL1-209ENST00000580738 IPO11Q9UI26 975 aaKnown RBP19.55■□□□□ 0.72
NDEL1-209ENST00000580738 SALL4Q9UJQ4 1053 aa19.55■□□□□ 0.72
NDEL1-209ENST00000580738 KIF26BQ2KJY2 2108 aa19.55■□□□□ 0.72
NDEL1-209ENST00000580738 PMM2O15305 246 aa19.54■□□□□ 0.72
NDEL1-209ENST00000580738 LEFTY1O75610 366 aa19.54■□□□□ 0.72
NDEL1-209ENST00000580738 TCEA3O75764 348 aa19.54■□□□□ 0.72
NDEL1-209ENST00000580738 ENDOD1O94919 500 aa19.54■□□□□ 0.72
NDEL1-209ENST00000580738 JUNDP17535 347 aa19.54■□□□□ 0.72
NDEL1-209ENST00000580738 KRT83P78385 493 aa19.54■□□□□ 0.72
NDEL1-209ENST00000580738 PNOCQ13519 176 aa19.54■□□□□ 0.72
NDEL1-209ENST00000580738 PDE1CQ14123 709 aaPredicted RBP19.54■□□□□ 0.72
NDEL1-209ENST00000580738 NR0B2Q15466 257 aa19.54■□□□□ 0.72
NDEL1-209ENST00000580738 C6orf132Q5T0Z8 1188 aa19.54■□□□□ 0.72
NDEL1-209ENST00000580738 SLC2A13Q96QE2 648 aa19.54■□□□□ 0.72
NDEL1-209ENST00000580738 IL12RB2Q99665 862 aa19.54■□□□□ 0.72
NDEL1-209ENST00000580738 TCEAL2Q9H3H9 227 aaPredicted RBP19.54■□□□□ 0.72
NDEL1-209ENST00000580738 ACP6Q9NPH0 428 aa19.54■□□□□ 0.72
NDEL1-209ENST00000580738 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.54■□□□□ 0.72
NDEL1-209ENST00000580738 IL36AQ9UHA7 158 aa19.54■□□□□ 0.72
NDEL1-209ENST00000580738 ATXN7L1Q9ULK2 861 aaPredicted RBP19.54■□□□□ 0.72
NDEL1-209ENST00000580738 TLN1Q9Y490 2541 aaKnown RBP19.53■□□□□ 0.72
NDEL1-209ENST00000580738 PAGE1O75459 146 aa19.53■□□□□ 0.72
NDEL1-209ENST00000580738 GCATO75600 419 aa19.53■□□□□ 0.72
NDEL1-209ENST00000580738 GRAP2O75791 330 aa19.53■□□□□ 0.72
NDEL1-209ENST00000580738 LETM1O95202 739 aaPredicted RBP19.53■□□□□ 0.72
NDEL1-209ENST00000580738 HSP90AA1P07900 732 aaKnown RBP19.53■□□□□ 0.72
NDEL1-209ENST00000580738 ITGA2BP08514 1039 aa19.53■□□□□ 0.72
NDEL1-209ENST00000580738 RABIFP47224 123 aa19.53■□□□□ 0.72
NDEL1-209ENST00000580738 CDH4P55283 916 aa19.53■□□□□ 0.72
NDEL1-209ENST00000580738 RPS21P63220 83 aaKnown RBP19.53■□□□□ 0.72
NDEL1-209ENST00000580738 GCNT1Q02742 428 aa19.53■□□□□ 0.72
NDEL1-209ENST00000580738 C1QBPQ07021 282 aaKnown RBP19.53■□□□□ 0.72
NDEL1-209ENST00000580738 EIF2B5Q13144 721 aaKnown RBP19.53■□□□□ 0.72
NDEL1-209ENST00000580738 SRSF6Q13247 344 aaKnown RBP19.53■□□□□ 0.72
NDEL1-209ENST00000580738 ALFQ53S48 1182 aa19.53■□□□□ 0.72
NDEL1-209ENST00000580738 DPY19L3Q6ZPD9 716 aa19.53■□□□□ 0.72
NDEL1-209ENST00000580738 SLC35F3Q8IY50 421 aa19.53■□□□□ 0.72
NDEL1-209ENST00000580738 RBFAQ8N0V3 343 aa19.53■□□□□ 0.72
NDEL1-209ENST00000580738 SNX21Q969T3 373 aa19.53■□□□□ 0.72
NDEL1-209ENST00000580738 FEM1CQ96JP0 617 aa19.53■□□□□ 0.72
NDEL1-209ENST00000580738 KLF6Q99612 283 aaPredicted RBP19.53■□□□□ 0.72
NDEL1-209ENST00000580738 C2orf49Q9BVC5 232 aaPredicted RBP19.53■□□□□ 0.72
NDEL1-209ENST00000580738 BOCQ9BWV1 1114 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms