RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 AFMIDQ63HM1 303 aa10.11□□□□□ -0.79
GGA3-209ENST00000580646 IL31Q6EBC2 164 aa10.11□□□□□ -0.79
GGA3-209ENST00000580646 KIAA1324Q6UXG2 1013 aaKnown RBP10.11□□□□□ -0.79
GGA3-209ENST00000580646 SERPINA13PQ6UXR4 307 aa10.11□□□□□ -0.79
GGA3-209ENST00000580646 TFAP2DQ7Z6R9 452 aa10.11□□□□□ -0.79
GGA3-209ENST00000580646 METTL3Q86U44 580 aaKnown RBP10.11□□□□□ -0.79
GGA3-209ENST00000580646 CPNE8Q86YQ8 564 aa10.11□□□□□ -0.79
GGA3-209ENST00000580646 TMPRSS6Q8IU80 811 aa10.11□□□□□ -0.79
GGA3-209ENST00000580646 SYT12Q8IV01 421 aa10.11□□□□□ -0.79
GGA3-209ENST00000580646 KATNAL2Q8IYT4 538 aa10.11□□□□□ -0.79
GGA3-209ENST00000580646 DEFB119Q8N690 84 aa10.11□□□□□ -0.79
GGA3-209ENST00000580646 KCTD6Q8NC69 237 aa10.11□□□□□ -0.79
GGA3-209ENST00000580646 OR52K2Q8NGK3 314 aa10.11□□□□□ -0.79
GGA3-209ENST00000580646 CYB5D2Q8WUJ1 264 aa10.11□□□□□ -0.79
GGA3-209ENST00000580646 CSPG4P5Q96PW8 444 aa10.11□□□□□ -0.79
GGA3-209ENST00000580646 MKRN2Q9H000 416 aaKnown RBP10.11□□□□□ -0.79
GGA3-209ENST00000580646 MUC3BQ9H195 1237 aa10.11□□□□□ -0.79
GGA3-209ENST00000580646 NDFIP2Q9NV92 336 aa10.11□□□□□ -0.79
GGA3-209ENST00000580646 VPS28Q9UK41 221 aa10.11□□□□□ -0.79
GGA3-209ENST00000580646 PLA2G4CQ9UP65 541 aa10.11□□□□□ -0.79
GGA3-209ENST00000580646 ANKRD36A6QL64 1941 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 A0A0U1RQJ8 604 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 LNP1A1A4G5 178 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 MACROD2A1Z1Q3 448 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 ZSCAN5CA6NGD5 496 aaPredicted RBP10.1□□□□□ -0.79
GGA3-209ENST00000580646 C3orf70A6NLC5 250 aaPredicted RBP10.1□□□□□ -0.79
GGA3-209ENST00000580646 TM4SF5O14894 197 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 DAPK3O43293 454 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 EPHX1P07099 455 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 HLA-EP13747 358 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 ITPKAP23677 461 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 DPP6P42658 865 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 CLCN6P51797 869 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 GEMIN4P57678 1058 aaKnown RBP10.1□□□□□ -0.79
GGA3-209ENST00000580646 COPS2P61201 443 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 IRX4P78413 519 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 ZNF33AQ06730 810 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 SLC20A2Q08357 652 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 POLD3Q15054 466 aaPredicted RBP10.1□□□□□ -0.79
GGA3-209ENST00000580646 PAFAH1B3Q15102 231 aaKnown RBP10.1□□□□□ -0.79
GGA3-209ENST00000580646 ATP13A4Q4VNC1 1196 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 RNF219Q5W0B1 726 aaPredicted RBP10.1□□□□□ -0.79
GGA3-209ENST00000580646 RETSATQ6NUM9 610 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 TMCO3Q6UWJ1 677 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 NT5DC3Q86UY8 548 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 LRRC49Q8IUZ0 686 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 APCDD1Q8J025 514 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 TRIM58Q8NG06 486 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 EXD1Q8NHP7 514 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 CASKIN2Q8WXE0 1202 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 ARHGEF2Q92974 986 aaKnown RBP10.1□□□□□ -0.79
GGA3-209ENST00000580646 SIPA1Q96FS4 1042 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 MYO19Q96H55 970 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 RBM41Q96IZ5 413 aaKnown RBP10.1□□□□□ -0.79
GGA3-209ENST00000580646 MRGPRX3Q96LB0 322 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 ALS2CR12Q96Q35 445 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 PSMB7Q99436 277 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 EDEM2Q9BV94 578 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 KLC2Q9H0B6 622 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 TMEM245Q9H330 911 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 NOL6Q9H6R4 1146 aaKnown RBP10.1□□□□□ -0.79
GGA3-209ENST00000580646 LRRC19Q9H756 370 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 FBRSQ9HAH7 460 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 CD93Q9NPY3 652 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 ITM2CQ9NQX7 267 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 TMEM74BQ9NUR3 256 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 TRIM10Q9UDY6 481 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 EVLQ9UI08 416 aaPredicted RBP10.1□□□□□ -0.79
GGA3-209ENST00000580646 DNAI1Q9UI46 699 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 SLC25A13Q9UJS0 675 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 PILRBQ9UKJ0 227 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 AMFRQ9UKV5 643 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 ERVW-1Q9UQF0 538 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 HS3ST2Q9Y278 367 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 EFR3BQ9Y2G0 817 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 PCDHA3Q9Y5H8 950 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 CAPN6Q9Y6Q1 641 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 CHD8Q9HCK8 2581 aa10.1□□□□□ -0.79
GGA3-209ENST00000580646 RALGAPA1Q6GYQ0 2036 aa10.09□□□□□ -0.79
GGA3-209ENST00000580646 A0A0D9SEW6 157 aa10.09□□□□□ -0.79
GGA3-209ENST00000580646 LRRD1A4D1F6 860 aa10.09□□□□□ -0.79
GGA3-209ENST00000580646 GOLGA6L9A6NEM1 432 aa10.09□□□□□ -0.79
GGA3-209ENST00000580646 ARHGAP42A6NI28 874 aa10.09□□□□□ -0.79
GGA3-209ENST00000580646 C4orf47A7E2U8 309 aa10.09□□□□□ -0.79
GGA3-209ENST00000580646 KDELR3O43731 214 aa10.09□□□□□ -0.79
GGA3-209ENST00000580646 ATP9BO43861 1147 aa10.09□□□□□ -0.79
GGA3-209ENST00000580646 NDUFS2O75306 463 aa10.09□□□□□ -0.79
GGA3-209ENST00000580646 PALMO75781 387 aa10.09□□□□□ -0.79
GGA3-209ENST00000580646 ZMPSTE24O75844 475 aa10.09□□□□□ -0.79
GGA3-209ENST00000580646 ZRANB2O95218 330 aaKnown RBP eCLIP10.09□□□□□ -0.79
GGA3-209ENST00000580646 CD48P09326 243 aa10.09□□□□□ -0.79
GGA3-209ENST00000580646 ZFXP17010 805 aaPredicted RBP10.09□□□□□ -0.79
GGA3-209ENST00000580646 CD6P30203 668 aa10.09□□□□□ -0.79
GGA3-209ENST00000580646 PTPN7P35236 360 aa10.09□□□□□ -0.79
GGA3-209ENST00000580646 NNMTP40261 264 aa10.09□□□□□ -0.79
GGA3-209ENST00000580646 PEX5P50542 639 aa10.09□□□□□ -0.79
GGA3-209ENST00000580646 COPAP53621 1224 aa10.09□□□□□ -0.79
GGA3-209ENST00000580646 ST8SIA6P61647 398 aa10.09□□□□□ -0.79
GGA3-209ENST00000580646 CAMK2GQ13555 558 aaPredicted RBP10.09□□□□□ -0.79
GGA3-209ENST00000580646 PPP2R5EQ16537 467 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms