RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 ARHGAP9Q9BRR9 750 aa12.51□□□□□ -0.41
CDK5RAP3-216ENST00000579853 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.51□□□□□ -0.41
CDK5RAP3-216ENST00000579853 C2orf49Q9BVC5 232 aaPredicted RBP12.51□□□□□ -0.41
CDK5RAP3-216ENST00000579853 HDAC8Q9BY41 377 aa12.51□□□□□ -0.41
CDK5RAP3-216ENST00000579853 GPR27Q9NS67 375 aa12.51□□□□□ -0.41
CDK5RAP3-216ENST00000579853 ARMCX3Q9UH62 379 aaPredicted RBP12.51□□□□□ -0.41
CDK5RAP3-216ENST00000579853 IPO11Q9UI26 975 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-216ENST00000579853 HPSEQ9Y251 543 aa12.51□□□□□ -0.41
CDK5RAP3-216ENST00000579853 HS3ST2Q9Y278 367 aa12.51□□□□□ -0.41
CDK5RAP3-216ENST00000579853 TMX2-CTNND1H3BSU7 103 aa12.5□□□□□ -0.41
CDK5RAP3-216ENST00000579853 TNFSF15O95150 251 aa12.5□□□□□ -0.41
CDK5RAP3-216ENST00000579853 IGLV3-25P01717 112 aa12.5□□□□□ -0.41
CDK5RAP3-216ENST00000579853 BRD2P25440 801 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP3-216ENST00000579853 GPD2P43304 727 aa12.5□□□□□ -0.41
CDK5RAP3-216ENST00000579853 FKBP3Q00688 224 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP3-216ENST00000579853 FZD2Q14332 565 aa12.5□□□□□ -0.41
CDK5RAP3-216ENST00000579853 NR0B2Q15466 257 aa12.5□□□□□ -0.41
CDK5RAP3-216ENST00000579853 FOXD4L5Q5VV16 416 aaPredicted RBP12.5□□□□□ -0.41
CDK5RAP3-216ENST00000579853 KIAA1161Q6NSJ0 714 aa12.5□□□□□ -0.41
CDK5RAP3-216ENST00000579853 FOXR1Q6PIV2 292 aa12.5□□□□□ -0.41
CDK5RAP3-216ENST00000579853 USP53Q70EK8 1073 aa12.5□□□□□ -0.41
CDK5RAP3-216ENST00000579853 FOXD4L4Q8WXT5 416 aaPredicted RBP12.5□□□□□ -0.41
CDK5RAP3-216ENST00000579853 ALG14Q96F25 216 aa12.5□□□□□ -0.41
CDK5RAP3-216ENST00000579853 PRR11Q96HE9 360 aaPredicted RBP12.5□□□□□ -0.41
CDK5RAP3-216ENST00000579853 NOX5Q96PH1 765 aa12.5□□□□□ -0.41
CDK5RAP3-216ENST00000579853 ZSWIM1Q9BR11 485 aa12.5□□□□□ -0.41
CDK5RAP3-216ENST00000579853 SLC17A9Q9BYT1 436 aa12.5□□□□□ -0.41
CDK5RAP3-216ENST00000579853 THAP9Q9H5L6 903 aa12.5□□□□□ -0.41
CDK5RAP3-216ENST00000579853 FZD3Q9NPG1 666 aa12.5□□□□□ -0.41
CDK5RAP3-216ENST00000579853 STARD5Q9NSY2 213 aa12.5□□□□□ -0.41
CDK5RAP3-216ENST00000579853 PCDHGA7Q9Y5G6 932 aa12.5□□□□□ -0.41
CDK5RAP3-216ENST00000579853 A0A1W2PNU3 283 aaPredicted RBP12.49□□□□□ -0.41
CDK5RAP3-216ENST00000579853 TERTO14746 1132 aaKnown RBP12.49□□□□□ -0.41
CDK5RAP3-216ENST00000579853 PMM2O15305 246 aa12.49□□□□□ -0.41
CDK5RAP3-216ENST00000579853 SRCP12931 536 aa12.49□□□□□ -0.41
CDK5RAP3-216ENST00000579853 MYF5P13349 255 aa12.49□□□□□ -0.41
CDK5RAP3-216ENST00000579853 RECQLP46063 649 aaPredicted RBP12.49□□□□□ -0.41
CDK5RAP3-216ENST00000579853 CLDN2P57739 230 aa12.49□□□□□ -0.41
CDK5RAP3-216ENST00000579853 CDK17Q00537 523 aa12.49□□□□□ -0.41
CDK5RAP3-216ENST00000579853 EIF4EBP2Q13542 120 aaPredicted RBP12.49□□□□□ -0.41
CDK5RAP3-216ENST00000579853 SPIDRQ14159 915 aa12.49□□□□□ -0.41
CDK5RAP3-216ENST00000579853 ZNF542PQ5EBM4 170 aa12.49□□□□□ -0.41
CDK5RAP3-216ENST00000579853 C6orf132Q5T0Z8 1188 aa12.49□□□□□ -0.41
CDK5RAP3-216ENST00000579853 FBXL22Q6P050 247 aa12.49□□□□□ -0.41
CDK5RAP3-216ENST00000579853 GUSBP11Q6P575 273 aa12.49□□□□□ -0.41
CDK5RAP3-216ENST00000579853 ZNF574Q6ZN55 896 aaPredicted RBP12.49□□□□□ -0.41
CDK5RAP3-216ENST00000579853 CIR1Q86X95 450 aaPredicted RBP12.49□□□□□ -0.41
CDK5RAP3-216ENST00000579853 PPM1KQ8N3J5 372 aa12.49□□□□□ -0.41
CDK5RAP3-216ENST00000579853 EXD3Q8N9H8 876 aa12.49□□□□□ -0.41
CDK5RAP3-216ENST00000579853 ATP11CQ8NB49 1132 aa12.49□□□□□ -0.41
CDK5RAP3-216ENST00000579853 OR2A12Q8NGT7 310 aa12.49□□□□□ -0.41
CDK5RAP3-216ENST00000579853 SLC35C1Q96A29 364 aa12.49□□□□□ -0.41
CDK5RAP3-216ENST00000579853 ARRDC3Q96B67 414 aa12.49□□□□□ -0.41
CDK5RAP3-216ENST00000579853 SGF29Q96ES7 293 aa12.49□□□□□ -0.41
CDK5RAP3-216ENST00000579853 LIN37Q96GY3 246 aaPredicted RBP12.49□□□□□ -0.41
CDK5RAP3-216ENST00000579853 BMFQ96LC9 184 aa12.49□□□□□ -0.41
CDK5RAP3-216ENST00000579853 SEMA3CQ99985 751 aa12.49□□□□□ -0.41
CDK5RAP3-216ENST00000579853 MUC3BQ9H195 1237 aa12.49□□□□□ -0.41
CDK5RAP3-216ENST00000579853 FAM204AQ9H8W3 233 aa12.49□□□□□ -0.41
CDK5RAP3-216ENST00000579853 METTL14Q9HCE5 456 aaKnown RBP12.49□□□□□ -0.41
CDK5RAP3-216ENST00000579853 SPASTQ9UBP0 616 aa12.49□□□□□ -0.41
CDK5RAP3-216ENST00000579853 ZFR2Q9UPR6 939 aaKnown RBP12.49□□□□□ -0.41
CDK5RAP3-216ENST00000579853 TBC1D30Q9Y2I9 924 aa12.49□□□□□ -0.41
CDK5RAP3-216ENST00000579853 OR51B4Q9Y5P0 310 aa12.49□□□□□ -0.41
CDK5RAP3-216ENST00000579853 CREBBPQ92793 2442 aa12.49□□□□□ -0.41
CDK5RAP3-216ENST00000579853 ITPR2Q14571 2701 aa12.48□□□□□ -0.41
CDK5RAP3-216ENST00000579853 UNC13CQ8NB66 2214 aa12.48□□□□□ -0.41
CDK5RAP3-216ENST00000579853 NBPF19A0A087WUL8 3843 aa12.48□□□□□ -0.41
CDK5RAP3-216ENST00000579853 RNF225M0QZC1 329 aaPredicted RBP12.48□□□□□ -0.41
CDK5RAP3-216ENST00000579853 FPGTO14772 594 aa12.48□□□□□ -0.41
CDK5RAP3-216ENST00000579853 CTSLP07711 333 aa12.48□□□□□ -0.41
CDK5RAP3-216ENST00000579853 PYGBP11216 843 aa12.48□□□□□ -0.41
CDK5RAP3-216ENST00000579853 JUNDP17535 347 aa12.48□□□□□ -0.41
CDK5RAP3-216ENST00000579853 NUMBP49757 651 aa12.48□□□□□ -0.41
CDK5RAP3-216ENST00000579853 NEK3P51956 506 aa12.48□□□□□ -0.41
CDK5RAP3-216ENST00000579853 CDH4P55283 916 aa12.48□□□□□ -0.41
CDK5RAP3-216ENST00000579853 GCNT1Q02742 428 aa12.48□□□□□ -0.41
CDK5RAP3-216ENST00000579853 DNM1Q05193 864 aaKnown RBP12.48□□□□□ -0.41
CDK5RAP3-216ENST00000579853 SGCGQ13326 291 aa12.48□□□□□ -0.41
CDK5RAP3-216ENST00000579853 AUHQ13825 339 aaKnown RBP12.48□□□□□ -0.41
CDK5RAP3-216ENST00000579853 PTK2BQ14289 1009 aa12.48□□□□□ -0.41
CDK5RAP3-216ENST00000579853 DEFB133Q30KQ1 61 aa12.48□□□□□ -0.41
CDK5RAP3-216ENST00000579853 SEL1L3Q68CR1 1132 aa12.48□□□□□ -0.41
CDK5RAP3-216ENST00000579853 OR6B2Q6IFH4 312 aa12.48□□□□□ -0.41
CDK5RAP3-216ENST00000579853 KRBA2Q6ZNG9 492 aa12.48□□□□□ -0.41
CDK5RAP3-216ENST00000579853 TMEM110Q86TL2 294 aa12.48□□□□□ -0.41
CDK5RAP3-216ENST00000579853 LMX1AQ8TE12 382 aa12.48□□□□□ -0.41
CDK5RAP3-216ENST00000579853 TBATAQ96M53 351 aa12.48□□□□□ -0.41
CDK5RAP3-216ENST00000579853 LENG8Q96PV6 779 aaPredicted RBP12.48□□□□□ -0.41
CDK5RAP3-216ENST00000579853 BOCQ9BWV1 1114 aa12.48□□□□□ -0.41
CDK5RAP3-216ENST00000579853 SLC4A5Q9BY07 1137 aa12.48□□□□□ -0.41
CDK5RAP3-216ENST00000579853 RMND1Q9NWS8 449 aa12.48□□□□□ -0.41
CDK5RAP3-216ENST00000579853 DDIT4Q9NX09 232 aa12.48□□□□□ -0.41
CDK5RAP3-216ENST00000579853 SEPT3Q9UH03 358 aa12.48□□□□□ -0.41
CDK5RAP3-216ENST00000579853 IL36AQ9UHA7 158 aa12.48□□□□□ -0.41
CDK5RAP3-216ENST00000579853 ACSL6Q9UKU0 697 aa12.48□□□□□ -0.41
CDK5RAP3-216ENST00000579853 COL27A1Q8IZC6 1860 aaPredicted RBP12.48□□□□□ -0.41
CDK5RAP3-216ENST00000579853 FAM237AA0A1B0GTK4 181 aa12.47□□□□□ -0.41
CDK5RAP3-216ENST00000579853 POM121BA6NF01 834 aa12.47□□□□□ -0.41
CDK5RAP3-216ENST00000579853 PLD2O14939 933 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms