RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 RNF19AQ9NV58 838 aa15.39■□□□□ 0.05
ITGB4-206ENST00000579662 ARHGAP28Q9P2N2 729 aa15.39■□□□□ 0.05
ITGB4-206ENST00000579662 TRPC4Q9UBN4 977 aa15.39■□□□□ 0.05
ITGB4-206ENST00000579662 FAM220BPB1ANY3 271 aa15.39■□□□□ 0.05
ITGB4-206ENST00000579662 C1QTNF3-AMACRE9PGA6 284 aa15.39■□□□□ 0.05
ITGB4-206ENST00000579662 ATP5F1P24539 256 aaPredicted RBP15.39■□□□□ 0.05
ITGB4-206ENST00000579662 SLC16A1P53985 500 aa15.39■□□□□ 0.05
ITGB4-206ENST00000579662 EBNA1BP2Q99848 306 aaKnown RBP15.39■□□□□ 0.05
ITGB4-206ENST00000579662 NXF3Q9H4D5 531 aaKnown RBP15.39■□□□□ 0.05
ITGB4-206ENST00000579662 SLIT2O94813 1529 aa15.39■□□□□ 0.05
ITGB4-206ENST00000579662 RCCD1A6NED2 376 aa15.39■□□□□ 0.05
ITGB4-206ENST00000579662 PIGNO95427 931 aa15.39■□□□□ 0.05
ITGB4-206ENST00000579662 ATP6V1G2O95670 118 aa15.39■□□□□ 0.05
ITGB4-206ENST00000579662 GJB1P08034 283 aa15.39■□□□□ 0.05
ITGB4-206ENST00000579662 CTNNB1P35222 781 aa15.39■□□□□ 0.05
ITGB4-206ENST00000579662 CRYMQ14894 314 aa15.39■□□□□ 0.05
ITGB4-206ENST00000579662 TMEM26Q6ZUK4 368 aa15.39■□□□□ 0.05
ITGB4-206ENST00000579662 ADPRHL2Q9NX46 363 aa15.39■□□□□ 0.05
ITGB4-206ENST00000579662 ZNF541Q9H0D2 1346 aa15.39■□□□□ 0.05
ITGB4-206ENST00000579662 PHGDHO43175 533 aaKnown RBP15.39■□□□□ 0.05
ITGB4-206ENST00000579662 MAGEC1O60732 1142 aa15.39■□□□□ 0.05
ITGB4-206ENST00000579662 PARNO95453 639 aaKnown RBP15.39■□□□□ 0.05
ITGB4-206ENST00000579662 ME2P23368 584 aa15.39■□□□□ 0.05
ITGB4-206ENST00000579662 SERPINB3P29508 390 aa15.39■□□□□ 0.05
ITGB4-206ENST00000579662 RFX3P48380 749 aa15.39■□□□□ 0.05
ITGB4-206ENST00000579662 ALDH9A1P49189 494 aa15.39■□□□□ 0.05
ITGB4-206ENST00000579662 NEK3P51956 506 aa15.39■□□□□ 0.05
ITGB4-206ENST00000579662 RPL7AP62424 266 aaKnown RBP15.39■□□□□ 0.05
ITGB4-206ENST00000579662 AUHQ13825 339 aaKnown RBP15.39■□□□□ 0.05
ITGB4-206ENST00000579662 GJC2Q5T442 439 aaPredicted RBP15.39■□□□□ 0.05
ITGB4-206ENST00000579662 BTN2A2Q8WVV5 523 aa15.39■□□□□ 0.05
ITGB4-206ENST00000579662 USP6NLQ92738 828 aa15.39■□□□□ 0.05
ITGB4-206ENST00000579662 PCDHA2Q9Y5H9 948 aa15.39■□□□□ 0.05
ITGB4-206ENST00000579662 GRK4P32298 578 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 ATP13A4Q4VNC1 1196 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 SH3GL3Q99963 347 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 MYLK2Q9H1R3 596 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 RNPEPQ9H4A4 650 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 BTBD19C9JJ37 291 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 MLYCDO95822 493 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 MT-CO1P00395 513 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 ATP6V1B1P15313 513 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 ERCC2P18074 760 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 HTR7P34969 479 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 HSDL1Q3SXM5 330 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 ZNF614Q8N883 585 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 ATG16L2Q8NAA4 619 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 FIG4Q92562 907 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 TMEM245Q9H330 911 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 ASB8Q9H765 288 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 SAC3D1A6NKF1 404 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 CILPO75339 1184 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 CDC25CP30307 473 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 VSTM1Q6UX27 236 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 IZUMO2Q6UXV1 221 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 UNC5AQ6ZN44 842 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 SLC41A1Q8IVJ1 513 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 CDK20Q8IZL9 346 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 EID3Q8N140 333 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 ZNF398Q8TD17 642 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 ACSS3Q9H6R3 686 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 SNX8Q9Y5X2 465 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 FGF1P05230 155 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 LBPP18428 481 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 MARCKSL1P49006 195 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 CLK2P49760 499 aaKnown RBP15.38■□□□□ 0.05
ITGB4-206ENST00000579662 TAS2R40P59535 323 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 ZNF280AP59817 542 aaPredicted RBP15.38■□□□□ 0.05
ITGB4-206ENST00000579662 IL27RAQ6UWB1 636 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 IRGQQ8WZA9 623 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 CORO1BQ9BR76 489 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 CD248Q9HCU0 757 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 HPS4Q9NQG7 708 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 SNX6Q9UNH7 406 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 TBC1D3BA6NDS4 549 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 C4BPAP04003 597 aaKnown RBP15.38■□□□□ 0.05
ITGB4-206ENST00000579662 CXCR2P25025 360 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 SOX6P35712 828 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 FLT3LGP49771 235 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 HIRAP54198 1017 aaPredicted RBP15.38■□□□□ 0.05
ITGB4-206ENST00000579662 ITGA7Q13683 1181 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 PLEKHA7Q6IQ23 1121 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 SNX32Q86XE0 403 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 KREMEN1Q96MU8 473 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 SEMA3CQ99985 751 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 TTPALQ9BTX7 342 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 ZMYM5Q9UJ78 669 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 KLHL20Q9Y2M5 609 aa15.38■□□□□ 0.05
ITGB4-206ENST00000579662 BIRC5O15392 142 aa15.37■□□□□ 0.05
ITGB4-206ENST00000579662 SASH3O75995 380 aa15.37■□□□□ 0.05
ITGB4-206ENST00000579662 S100A3P33764 101 aa15.37■□□□□ 0.05
ITGB4-206ENST00000579662 CCL23P55773 120 aa15.37■□□□□ 0.05
ITGB4-206ENST00000579662 ACSM2AQ08AH3 577 aa15.37■□□□□ 0.05
ITGB4-206ENST00000579662 TTMPQ5BVD1 217 aa15.37■□□□□ 0.05
ITGB4-206ENST00000579662 ACSM2BQ68CK6 577 aa15.37■□□□□ 0.05
ITGB4-206ENST00000579662 ALG9Q9H6U8 611 aa15.37■□□□□ 0.05
ITGB4-206ENST00000579662 CYLDQ9NQC7 956 aa15.37■□□□□ 0.05
ITGB4-206ENST00000579662 DDX28Q9NUL7 540 aaKnown RBP15.37■□□□□ 0.05
ITGB4-206ENST00000579662 MRPS23Q9Y3D9 190 aaKnown RBP15.37■□□□□ 0.05
ITGB4-206ENST00000579662 RIPK3Q9Y572 518 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms