RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 TMEM25Q86YD3 366 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 MIB1Q86YT6 1006 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 TMTC1Q8IUR5 882 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 CCDC170Q8IYT3 715 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 CCDC185Q8N715 623 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 LRRC57Q8N9N7 239 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 RFFLQ8WZ73 363 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 EDAQ92838 391 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 CD101Q93033 1021 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 IGSF8Q969P0 613 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 NTAN1Q96AB6 310 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 E2F7Q96AV8 911 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 FAM149B1Q96BN6 582 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 ZNF653Q96CK0 615 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 OTUB2Q96DC9 234 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 ALG14Q96F25 216 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 SERPINB11Q96P15 392 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 MCEEQ96PE7 176 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 NOX5Q96PH1 765 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 GCNAQ96QF7 691 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 CDK5RAP1Q96SZ6 601 aaKnown RBP3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 BAG1Q99933 345 aaPredicted RBP3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 DESI2Q9BSY9 194 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 CNPY3Q9BT09 278 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 KLC2Q9H0B6 622 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 EBF3Q9H4W6 596 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 EPHX3Q9H6B9 360 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 NOL6Q9H6R4 1146 aaKnown RBP3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 CARS2Q9HA77 564 aaKnown RBP3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 DDIT4Q9NX09 232 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 RRN3Q9NYV6 651 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 GTSE1Q9NYZ3 720 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 TRIM10Q9UDY6 481 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 INTS6Q9UL03 887 aaKnown RBP3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 CEP83Q9Y592 693 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 PCDHA13Q9Y5I0 950 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 OR51B4Q9Y5P0 310 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 SNX10Q9Y5X0 201 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 HS3ST4Q9Y661 456 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 EPN1Q9Y6I3 576 aaPredicted RBP3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 DUSP10Q9Y6W6 482 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 VPS13AQ96RL7 3174 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 PCDH15Q96QU1 1955 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 ABCA7Q8IZY2 2146 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 CACNA1EQ15878 2313 aa3.92□□□□□ -1.78
SMARCE1-215ENST00000578995 GRID2IPA4D2P6 1211 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 C3orf70A6NLC5 250 aaPredicted RBP3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 DRGXA6NNA5 263 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 C10orf142B7Z368 130 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 SPECC1L-ADORA2AF8WAN1 911 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 TRDMT1O14717 391 aaKnown RBP3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 DCXO43602 365 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 ACSL4O60488 711 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 BUB1BO60566 1050 aaPredicted RBP3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 PAGE1O75459 146 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 PROSCO94903 275 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 HMBSP08397 361 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 H2AFZP0C0S5 128 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 IRF1P10914 325 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 TDGF1P13385 188 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 PDGFRAP16234 1089 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 TACR2P21452 398 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 IL4RP24394 825 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 MIPP30301 263 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 GDI1P31150 447 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 MAN1A1P33908 653 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 RDXP35241 583 aaKnown RBP3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 ADRA1BP35368 520 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 PCK1P35558 622 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 KIR2DL1P43626 348 aaPredicted RBP3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 SLC6A11P48066 632 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 MARCKSL1P49006 195 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 CLCN7P51798 805 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 VAV2P52735 878 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 GSDMDP57764 484 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 RPS24P62847 133 aaKnown RBP3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 COG7P83436 770 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 SIGLEC14Q08ET2 396 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 RUNX3Q13761 415 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 ENPP2Q13822 863 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 PDGFRLQ15198 375 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 TAF12Q16514 161 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 DPYSL2Q16555 572 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 ALFQ53S48 1182 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 FSCBQ5H9T9 825 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 TMEM196Q5HYL7 178 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 BRMS1LQ5PSV4 323 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 LY6G5CQ5SRR4 150 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 ADGRF1Q5T601 910 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 AFMIDQ63HM1 303 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 RAP1GAP2Q684P5 730 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 NUGGCQ68CJ6 796 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 PKN3Q6P5Z2 889 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 RFWD3Q6PCD5 774 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 H2AFVQ71UI9 128 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 BMP8AQ7Z5Y6 402 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 NLRP14Q86W24 1093 aa3.91□□□□□ -1.78
SMARCE1-215ENST00000578995 FAM131BQ86XD5 332 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms