RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 FAXDC2Q96IV6 333 aa9.54□□□□□ -0.88
NPLOC4-210ENST00000572824 TIGD1Q96MW7 591 aa9.54□□□□□ -0.88
NPLOC4-210ENST00000572824 CPXM1Q96SM3 734 aa9.54□□□□□ -0.88
NPLOC4-210ENST00000572824 SLC2A11Q9BYW1 496 aa9.54□□□□□ -0.88
NPLOC4-210ENST00000572824 GTPBP4Q9BZE4 634 aaKnown RBP9.54□□□□□ -0.88
NPLOC4-210ENST00000572824 CLEC4MQ9H2X3 399 aaPredicted RBP9.54□□□□□ -0.88
NPLOC4-210ENST00000572824 SLC32A1Q9H598 525 aa9.54□□□□□ -0.88
NPLOC4-210ENST00000572824 METTL14Q9HCE5 456 aaKnown RBP9.54□□□□□ -0.88
NPLOC4-210ENST00000572824 SIX2Q9NPC8 291 aa9.54□□□□□ -0.88
NPLOC4-210ENST00000572824 UBE2TQ9NPD8 197 aaPredicted RBP9.54□□□□□ -0.88
NPLOC4-210ENST00000572824 TM7SF3Q9NS93 570 aa9.54□□□□□ -0.88
NPLOC4-210ENST00000572824 CA5BQ9Y2D0 317 aa9.54□□□□□ -0.88
NPLOC4-210ENST00000572824 NEUROG3Q9Y4Z2 214 aa9.54□□□□□ -0.88
NPLOC4-210ENST00000572824 H3BRJ5 948 aa9.53□□□□□ -0.88
NPLOC4-210ENST00000572824 GNB5O14775 395 aa9.53□□□□□ -0.88
NPLOC4-210ENST00000572824 THAP12O43422 761 aa9.53□□□□□ -0.88
NPLOC4-210ENST00000572824 TRUB2O95900 331 aaKnown RBP9.53□□□□□ -0.88
NPLOC4-210ENST00000572824 IGLV3-25P01717 112 aa9.53□□□□□ -0.88
NPLOC4-210ENST00000572824 AFPP02771 609 aaKnown RBP9.53□□□□□ -0.88
NPLOC4-210ENST00000572824 ERBB2P04626 1255 aa9.53□□□□□ -0.88
NPLOC4-210ENST00000572824 PDGFRAP16234 1089 aa9.53□□□□□ -0.88
NPLOC4-210ENST00000572824 TACR2P21452 398 aa9.53□□□□□ -0.88
NPLOC4-210ENST00000572824 CDC25BP30305 580 aa9.53□□□□□ -0.88
NPLOC4-210ENST00000572824 GCNT1Q02742 428 aa9.53□□□□□ -0.88
NPLOC4-210ENST00000572824 SCAPQ12770 1279 aa9.53□□□□□ -0.88
NPLOC4-210ENST00000572824 PAK1Q13153 545 aa9.53□□□□□ -0.88
NPLOC4-210ENST00000572824 PDCLQ13371 301 aa9.53□□□□□ -0.88
NPLOC4-210ENST00000572824 SHBQ15464 509 aa9.53□□□□□ -0.88
NPLOC4-210ENST00000572824 RAB6CQ53S08 254 aa9.53□□□□□ -0.88
NPLOC4-210ENST00000572824 C2CD6Q53TS8 623 aa9.53□□□□□ -0.88
NPLOC4-210ENST00000572824 RPS26P11Q5JNZ5 115 aaPredicted RBP9.53□□□□□ -0.88
NPLOC4-210ENST00000572824 SYCP2LQ5T4T6 812 aa9.53□□□□□ -0.88
NPLOC4-210ENST00000572824 C9orf64Q5T6V5 341 aa9.53□□□□□ -0.88
NPLOC4-210ENST00000572824 DPY19L2P1Q6NXN4 242 aa9.53□□□□□ -0.88
NPLOC4-210ENST00000572824 NCEH1Q6PIU2 408 aa9.53□□□□□ -0.88
NPLOC4-210ENST00000572824 TRIM65Q6PJ69 517 aa9.53□□□□□ -0.88
NPLOC4-210ENST00000572824 C19orf48Q6RUI8 117 aa9.53□□□□□ -0.88
NPLOC4-210ENST00000572824 FAM183BPQ6ZVS7 135 aa9.53□□□□□ -0.88
NPLOC4-210ENST00000572824 C14orf80Q86SX3 495 aa9.53□□□□□ -0.88
NPLOC4-210ENST00000572824 MMAAQ8IVH4 418 aaKnown RBP9.53□□□□□ -0.88
NPLOC4-210ENST00000572824 STK40Q8N2I9 435 aa9.53□□□□□ -0.88
NPLOC4-210ENST00000572824 BEND7Q8N7W2 519 aaPredicted RBP9.53□□□□□ -0.88
NPLOC4-210ENST00000572824 HJURPQ8NCD3 748 aaPredicted RBP9.53□□□□□ -0.88
NPLOC4-210ENST00000572824 WFIKKN2Q8TEU8 576 aa9.53□□□□□ -0.88
NPLOC4-210ENST00000572824 IRGQQ8WZA9 623 aa9.53□□□□□ -0.88
NPLOC4-210ENST00000572824 IGSF8Q969P0 613 aa9.53□□□□□ -0.88
NPLOC4-210ENST00000572824 PRMT1Q99873 361 aaKnown RBP9.53□□□□□ -0.88
NPLOC4-210ENST00000572824 RAB6CQ9H0N0 254 aa9.53□□□□□ -0.88
NPLOC4-210ENST00000572824 PABPC3Q9H361 631 aaKnown RBP9.53□□□□□ -0.88
NPLOC4-210ENST00000572824 SUSD2Q9UGT4 822 aa9.53□□□□□ -0.88
NPLOC4-210ENST00000572824 CNTN6Q9UQ52 1028 aa9.53□□□□□ -0.88
NPLOC4-210ENST00000572824 ERVW-1Q9UQF0 538 aa9.53□□□□□ -0.88
NPLOC4-210ENST00000572824 MSRB2Q9Y3D2 182 aa9.53□□□□□ -0.88
NPLOC4-210ENST00000572824 KNTC1P50748 2209 aa9.52□□□□□ -0.88
NPLOC4-210ENST00000572824 URB1O60287 2271 aaKnown RBP9.52□□□□□ -0.89
NPLOC4-210ENST00000572824 C10orf142B7Z368 130 aa9.52□□□□□ -0.89
NPLOC4-210ENST00000572824 LINC01387J3KSC0 135 aa9.52□□□□□ -0.89
NPLOC4-210ENST00000572824 PMM2O15305 246 aa9.52□□□□□ -0.89
NPLOC4-210ENST00000572824 LUC7L3O95232 432 aaKnown RBP9.52□□□□□ -0.89
NPLOC4-210ENST00000572824 LATS1O95835 1130 aa9.52□□□□□ -0.89
NPLOC4-210ENST00000572824 SYPP08247 313 aa9.52□□□□□ -0.89
NPLOC4-210ENST00000572824 ESRRAP11474 423 aaPredicted RBP9.52□□□□□ -0.89
NPLOC4-210ENST00000572824 POLR2EP19388 210 aaKnown RBP9.52□□□□□ -0.89
NPLOC4-210ENST00000572824 USP8P40818 1118 aa9.52□□□□□ -0.89
NPLOC4-210ENST00000572824 MATKP42679 507 aa9.52□□□□□ -0.89
NPLOC4-210ENST00000572824 RING1Q06587 406 aa9.52□□□□□ -0.89
NPLOC4-210ENST00000572824 PCDH1Q08174 1060 aa9.52□□□□□ -0.89
NPLOC4-210ENST00000572824 CDH18Q13634 790 aa9.52□□□□□ -0.89
NPLOC4-210ENST00000572824 ZNF423Q2M1K9 1284 aa9.52□□□□□ -0.89
NPLOC4-210ENST00000572824 HNRNPA1L2Q32P51 320 aaKnown RBP9.52□□□□□ -0.89
NPLOC4-210ENST00000572824 PTPN20Q4JDL3 420 aa9.52□□□□□ -0.89
NPLOC4-210ENST00000572824 ARTNQ5T4W7 220 aa9.52□□□□□ -0.89
NPLOC4-210ENST00000572824 NUGGCQ68CJ6 796 aa9.52□□□□□ -0.89
NPLOC4-210ENST00000572824 ZNF776Q68DI1 518 aaPredicted RBP9.52□□□□□ -0.89
NPLOC4-210ENST00000572824 CXorf57Q6NSI4 855 aaKnown RBP9.52□□□□□ -0.89
NPLOC4-210ENST00000572824 TRNP1Q6NT89 227 aa9.52□□□□□ -0.89
NPLOC4-210ENST00000572824 KDM7AQ6ZMT4 941 aa9.52□□□□□ -0.89
NPLOC4-210ENST00000572824 CREBRFQ8IUR6 639 aa9.52□□□□□ -0.89
NPLOC4-210ENST00000572824 DEFB106AQ8N104 65 aa9.52□□□□□ -0.89
NPLOC4-210ENST00000572824 CADM4Q8NFZ8 388 aa9.52□□□□□ -0.89
NPLOC4-210ENST00000572824 FIBINQ8TAL6 211 aa9.52□□□□□ -0.89
NPLOC4-210ENST00000572824 ZNF606Q8WXB4 792 aa9.52□□□□□ -0.89
NPLOC4-210ENST00000572824 TTC17Q96AE7 1141 aa9.52□□□□□ -0.89
NPLOC4-210ENST00000572824 HSFY1Q96LI6 401 aa9.52□□□□□ -0.89
NPLOC4-210ENST00000572824 NUP58Q9BVL2 599 aa9.52□□□□□ -0.89
NPLOC4-210ENST00000572824 RSPH9Q9H1X1 276 aaPredicted RBP9.52□□□□□ -0.89
NPLOC4-210ENST00000572824 NEUROG2Q9H2A3 272 aa9.52□□□□□ -0.89
NPLOC4-210ENST00000572824 FAM124BQ9H5Z6 455 aaPredicted RBP9.52□□□□□ -0.89
NPLOC4-210ENST00000572824 SARDHQ9UL12 918 aa9.52□□□□□ -0.89
NPLOC4-210ENST00000572824 PPM1HQ9ULR3 514 aa9.52□□□□□ -0.89
NPLOC4-210ENST00000572824 TLR6Q9Y2C9 796 aa9.52□□□□□ -0.89
NPLOC4-210ENST00000572824 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.52□□□□□ -0.89
NPLOC4-210ENST00000572824 CHD5Q8TDI0 1954 aa9.52□□□□□ -0.89
NPLOC4-210ENST00000572824 COL27A1Q8IZC6 1860 aaPredicted RBP9.51□□□□□ -0.89
NPLOC4-210ENST00000572824 ASXL3Q9C0F0 2248 aa9.51□□□□□ -0.89
NPLOC4-210ENST00000572824 NPC1O15118 1278 aa9.51□□□□□ -0.89
NPLOC4-210ENST00000572824 RTN2O75298 545 aa9.51□□□□□ -0.89
NPLOC4-210ENST00000572824 RNASEH2AO75792 299 aaKnown RBP9.51□□□□□ -0.89
NPLOC4-210ENST00000572824 CNTN5O94779 1100 aa9.51□□□□□ -0.89
NPLOC4-210ENST00000572824 FBXO21O94952 628 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms