RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 ATP6V1E2Q96A05 226 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 LENG1Q96BZ8 264 aaPredicted RBP17.73■□□□□ 0.43
SCARF1-205ENST00000571272 MRPL1Q9BYD6 325 aaKnown RBP17.73■□□□□ 0.43
SCARF1-205ENST00000571272 ELP3Q9H9T3 547 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 PREBQ9HCU5 417 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 XPR1Q9UBH6 696 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 WDR90Q96KV7 1748 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 DLX3O60479 287 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 DAB1O75553 588 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 BCAS2O75934 225 aaPredicted RBP17.73■□□□□ 0.43
SCARF1-205ENST00000571272 CABYRO75952 493 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 RECQL4O94761 1208 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 DDHD2O94830 711 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 CSPG5O95196 566 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 VAPBO95292 243 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 PTPN1P18031 435 aaKnown RBP17.73■□□□□ 0.43
SCARF1-205ENST00000571272 NELFEP18615 380 aaKnown RBP17.73■□□□□ 0.43
SCARF1-205ENST00000571272 CSE1LP55060 971 aaKnown RBP17.73■□□□□ 0.43
SCARF1-205ENST00000571272 TBC1D25Q3MII6 688 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 IL23RQ5VWK5 629 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 OLFML2BQ68BL8 750 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 KCTD11Q693B1 232 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 GK5Q6ZS86 529 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 CATSPER4Q7RTX7 472 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 ZC3HC1Q86WB0 502 aaKnown RBP17.73■□□□□ 0.43
SCARF1-205ENST00000571272 CATSPER1Q8NEC5 780 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 SENP6Q9GZR1 1112 aaPredicted RBP17.73■□□□□ 0.43
SCARF1-205ENST00000571272 PCDHAC1Q9H158 963 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 ZNF385DQ9H6B1 395 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 BCAP29Q9UHQ4 241 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 SNX10Q9Y5X0 201 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 CSADQ9Y600 493 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 SHROOM3Q8TF72 1996 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 PRSS51A0A1B0GVH4 220 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 TCAF2A6NFQ2 919 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 FZD9O00144 591 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 SLC25A27O95847 323 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 SLC35E2BP0CK96 405 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 PCSK6P29122 969 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 TPI1P60174 286 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 NSUN2Q08J23 767 aaKnown RBP eCLIP17.73■□□□□ 0.43
SCARF1-205ENST00000571272 CTU1Q7Z7A3 348 aaKnown RBP17.73■□□□□ 0.43
SCARF1-205ENST00000571272 SETD3Q86TU7 594 aaPredicted RBP17.73■□□□□ 0.43
SCARF1-205ENST00000571272 WNT8BQ93098 351 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 EME1Q96AY2 570 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 GPR22Q99680 433 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 RBM38Q9H0Z9 239 aaKnown RBP17.73■□□□□ 0.43
SCARF1-205ENST00000571272 PLEKHA5Q9HAU0 1116 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 CDHR5Q9HBB8 845 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 LRRC4Q9HBW1 653 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 HSFX1Q9UBD0 423 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 MID2Q9UJV3 735 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 STAP1Q9ULZ2 295 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 PHF24Q9UPV7 400 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 XPO1O14980 1071 aaKnown RBP17.72■□□□□ 0.43
SCARF1-205ENST00000571272 GABRB3P28472 473 aa17.72■□□□□ 0.43
SCARF1-205ENST00000571272 ADRA1BP35368 520 aa17.72■□□□□ 0.43
SCARF1-205ENST00000571272 CTBP1Q13363 440 aa17.72■□□□□ 0.43
SCARF1-205ENST00000571272 PTK2BQ14289 1009 aa17.72■□□□□ 0.43
SCARF1-205ENST00000571272 DENND6AQ8IWF6 608 aa17.72■□□□□ 0.43
SCARF1-205ENST00000571272 CENPLQ8N0S6 344 aaPredicted RBP17.72■□□□□ 0.43
SCARF1-205ENST00000571272 APPL2Q8NEU8 664 aa17.72■□□□□ 0.43
SCARF1-205ENST00000571272 USP33Q8TEY7 942 aa17.72■□□□□ 0.43
SCARF1-205ENST00000571272 ZFRQ96KR1 1074 aaKnown RBP17.72■□□□□ 0.43
SCARF1-205ENST00000571272 ZNF696Q9H7X3 374 aa17.72■□□□□ 0.43
SCARF1-205ENST00000571272 PRDM16Q9HAZ2 1276 aa17.72■□□□□ 0.43
SCARF1-205ENST00000571272 VPS28Q9UK41 221 aa17.72■□□□□ 0.43
SCARF1-205ENST00000571272 KCNU1A8MYU2 1149 aa17.72■□□□□ 0.43
SCARF1-205ENST00000571272 H3BSA7 217 aa17.72■□□□□ 0.43
SCARF1-205ENST00000571272 ACOT8O14734 319 aa17.72■□□□□ 0.43
SCARF1-205ENST00000571272 JCHAINP01591 159 aa17.72■□□□□ 0.43
SCARF1-205ENST00000571272 AHSGP02765 367 aa17.72■□□□□ 0.43
SCARF1-205ENST00000571272 APOA4P06727 396 aa17.72■□□□□ 0.43
SCARF1-205ENST00000571272 FGFR3P22607 806 aa17.72■□□□□ 0.43
SCARF1-205ENST00000571272 DCAF4L1Q3SXM0 396 aa17.72■□□□□ 0.43
SCARF1-205ENST00000571272 ARMCX2Q7L311 632 aa17.72■□□□□ 0.43
SCARF1-205ENST00000571272 TMEM102Q8N9M5 508 aaPredicted RBP17.72■□□□□ 0.43
SCARF1-205ENST00000571272 NXNL1Q96CM4 212 aa17.72■□□□□ 0.43
SCARF1-205ENST00000571272 MCMBPQ9BTE3 642 aa17.72■□□□□ 0.43
SCARF1-205ENST00000571272 GBA3Q9H227 469 aa17.72■□□□□ 0.43
SCARF1-205ENST00000571272 H3BRB1 525 aa17.71■□□□□ 0.43
SCARF1-205ENST00000571272 NRP1O14786 923 aa17.71■□□□□ 0.43
SCARF1-205ENST00000571272 MPP1Q00013 466 aa17.71■□□□□ 0.43
SCARF1-205ENST00000571272 ZNF410Q86VK4 478 aa17.71■□□□□ 0.43
SCARF1-205ENST00000571272 SIX6OS1Q8N1H7 587 aa17.71■□□□□ 0.43
SCARF1-205ENST00000571272 SNX31Q8N9S9 440 aa17.71■□□□□ 0.43
SCARF1-205ENST00000571272 B3GALNT2Q8NCR0 500 aa17.71■□□□□ 0.43
SCARF1-205ENST00000571272 STYXQ8WUJ0 223 aa17.71■□□□□ 0.43
SCARF1-205ENST00000571272 NT5C3BQ969T7 300 aa17.71■□□□□ 0.43
SCARF1-205ENST00000571272 IL22Q9GZX6 179 aa17.71■□□□□ 0.43
SCARF1-205ENST00000571272 TUT1Q9H6E5 874 aaKnown RBP17.71■□□□□ 0.43
SCARF1-205ENST00000571272 STRNO43815 780 aa17.71■□□□□ 0.43
SCARF1-205ENST00000571272 HNRNPLP14866 589 aaKnown RBP eCLIP17.71■□□□□ 0.43
SCARF1-205ENST00000571272 HDCP19113 662 aa17.71■□□□□ 0.43
SCARF1-205ENST00000571272 PPIDQ08752 370 aaKnown RBP17.71■□□□□ 0.43
SCARF1-205ENST00000571272 LAMC2Q13753 1193 aa17.71■□□□□ 0.43
SCARF1-205ENST00000571272 DGKDQ16760 1214 aa17.71■□□□□ 0.43
SCARF1-205ENST00000571272 SH2D4BQ5SQS7 431 aa17.71■□□□□ 0.43
SCARF1-205ENST00000571272 MARCH8Q5T0T0 291 aa17.71■□□□□ 0.43
SCARF1-205ENST00000571272 LRRC8EQ6NSJ5 796 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms