RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 MFSD2AQ8NA29 543 aa15.65■□□□□ 0.1
SMG6-207ENST00000570756 CHPT1Q8WUD6 406 aa15.65■□□□□ 0.1
SMG6-207ENST00000570756 SLCO4A1Q96BD0 722 aa15.65■□□□□ 0.1
SMG6-207ENST00000570756 ZNF669Q96BR6 464 aaPredicted RBP15.65■□□□□ 0.1
SMG6-207ENST00000570756 COG8Q96MW5 612 aa15.65■□□□□ 0.1
SMG6-207ENST00000570756 GPATCH1Q9BRR8 931 aaKnown RBP15.65■□□□□ 0.1
SMG6-207ENST00000570756 GGA3Q9NZ52 723 aa15.65■□□□□ 0.1
SMG6-207ENST00000570756 FER1L6Q2WGJ9 1857 aa15.65■□□□□ 0.1
SMG6-207ENST00000570756 KCNU1A8MYU2 1149 aa15.64■□□□□ 0.09
SMG6-207ENST00000570756 RNF103O00237 685 aa15.64■□□□□ 0.09
SMG6-207ENST00000570756 TRIM24O15164 1050 aa15.64■□□□□ 0.09
SMG6-207ENST00000570756 AKAP10O43572 662 aa15.64■□□□□ 0.09
SMG6-207ENST00000570756 HSPA8P11142 646 aaKnown RBP15.64■□□□□ 0.09
SMG6-207ENST00000570756 UGT1A6P19224 532 aa15.64■□□□□ 0.09
SMG6-207ENST00000570756 CDH3P22223 829 aa15.64■□□□□ 0.09
SMG6-207ENST00000570756 UGT1A1P22309 533 aa15.64■□□□□ 0.09
SMG6-207ENST00000570756 UGT1A4P22310 534 aa15.64■□□□□ 0.09
SMG6-207ENST00000570756 HOXD12P35452 270 aa15.64■□□□□ 0.09
SMG6-207ENST00000570756 UGT1A3P35503 534 aa15.64■□□□□ 0.09
SMG6-207ENST00000570756 UGT1A5P35504 534 aa15.64■□□□□ 0.09
SMG6-207ENST00000570756 NAGLUP54802 743 aa15.64■□□□□ 0.09
SMG6-207ENST00000570756 CSE1LP55060 971 aaKnown RBP15.64■□□□□ 0.09
SMG6-207ENST00000570756 FRG1Q14331 258 aaKnown RBP15.64■□□□□ 0.09
SMG6-207ENST00000570756 DCLRE1AQ6PJP8 1040 aa15.64■□□□□ 0.09
SMG6-207ENST00000570756 MPZL3Q6UWV2 235 aa15.64■□□□□ 0.09
SMG6-207ENST00000570756 OLFML1Q6UWY5 402 aa15.64■□□□□ 0.09
SMG6-207ENST00000570756 CAMK1DQ8IU85 385 aa15.64■□□□□ 0.09
SMG6-207ENST00000570756 CXorf38Q8TB03 319 aa15.64■□□□□ 0.09
SMG6-207ENST00000570756 CSPG4P5Q96PW8 444 aa15.64■□□□□ 0.09
SMG6-207ENST00000570756 NPLQ9BXD5 320 aaPredicted RBP15.64■□□□□ 0.09
SMG6-207ENST00000570756 DNAI2Q9GZS0 605 aa15.64■□□□□ 0.09
SMG6-207ENST00000570756 CAB39LQ9H9S4 337 aa15.64■□□□□ 0.09
SMG6-207ENST00000570756 NRBP2Q9NSY0 501 aa15.64■□□□□ 0.09
SMG6-207ENST00000570756 HESX1Q9UBX0 185 aa15.64■□□□□ 0.09
SMG6-207ENST00000570756 SIX4Q9UIU6 781 aa15.64■□□□□ 0.09
SMG6-207ENST00000570756 TLK1Q9UKI8 766 aa15.64■□□□□ 0.09
SMG6-207ENST00000570756 TSPAN16Q9UKR8 245 aa15.64■□□□□ 0.09
SMG6-207ENST00000570756 SARDHQ9UL12 918 aa15.64■□□□□ 0.09
SMG6-207ENST00000570756 KIAA1257Q9ULG3 409 aa15.64■□□□□ 0.09
SMG6-207ENST00000570756 HTR3EA5X5Y0 456 aa15.64■□□□□ 0.09
SMG6-207ENST00000570756 DDHD2O94830 711 aa15.64■□□□□ 0.09
SMG6-207ENST00000570756 COL6A2P12110 1019 aa15.64■□□□□ 0.09
SMG6-207ENST00000570756 CTBSQ01459 385 aa15.64■□□□□ 0.09
SMG6-207ENST00000570756 SLC6A3Q01959 620 aa15.64■□□□□ 0.09
SMG6-207ENST00000570756 ZBTB17Q13105 803 aa15.64■□□□□ 0.09
SMG6-207ENST00000570756 DLG2Q15700 870 aa15.64■□□□□ 0.09
SMG6-207ENST00000570756 SAMD4BQ5PRF9 694 aaKnown RBP15.64■□□□□ 0.09
SMG6-207ENST00000570756 NCBP2-AS2Q69YL0 99 aa15.64■□□□□ 0.09
SMG6-207ENST00000570756 HMBOX1Q6NT76 420 aa15.64■□□□□ 0.09
SMG6-207ENST00000570756 GID8Q9NWU2 228 aa15.64■□□□□ 0.09
SMG6-207ENST00000570756 TMEM9Q9P0T7 183 aa15.64■□□□□ 0.09
SMG6-207ENST00000570756 AP4E1Q9UPM8 1137 aa15.64■□□□□ 0.09
SMG6-207ENST00000570756 TRIM64A6NGJ6 449 aa15.63■□□□□ 0.09
SMG6-207ENST00000570756 K7EPI3 171 aa15.63■□□□□ 0.09
SMG6-207ENST00000570756 TK2O00142 265 aa15.63■□□□□ 0.09
SMG6-207ENST00000570756 INHBBP09529 407 aa15.63■□□□□ 0.09
SMG6-207ENST00000570756 CKMT2P17540 419 aa15.63■□□□□ 0.09
SMG6-207ENST00000570756 ATICP31939 592 aa15.63■□□□□ 0.09
SMG6-207ENST00000570756 SNX16P57768 344 aa15.63■□□□□ 0.09
SMG6-207ENST00000570756 OSTNP61366 133 aa15.63■□□□□ 0.09
SMG6-207ENST00000570756 PRKCQQ04759 706 aa15.63■□□□□ 0.09
SMG6-207ENST00000570756 INTS11Q5TA45 600 aaKnown RBP15.63■□□□□ 0.09
SMG6-207ENST00000570756 GK5Q6ZS86 529 aa15.63■□□□□ 0.09
SMG6-207ENST00000570756 COLGALT2Q8IYK4 626 aa15.63■□□□□ 0.09
SMG6-207ENST00000570756 AFG1LQ8WV93 481 aa15.63■□□□□ 0.09
SMG6-207ENST00000570756 FCRL3Q96P31 734 aaPredicted RBP15.63■□□□□ 0.09
SMG6-207ENST00000570756 SLX1AQ9BQ83 275 aa15.63■□□□□ 0.09
SMG6-207ENST00000570756 CORO1BQ9BR76 489 aa15.63■□□□□ 0.09
SMG6-207ENST00000570756 YIPF2Q9BWQ6 316 aa15.63■□□□□ 0.09
SMG6-207ENST00000570756 TMEM39BQ9GZU3 492 aa15.63■□□□□ 0.09
SMG6-207ENST00000570756 ARMC1Q9NVT9 282 aa15.63■□□□□ 0.09
SMG6-207ENST00000570756 SSC5DA1L4H1 1573 aa15.63■□□□□ 0.09
SMG6-207ENST00000570756 SOCS2O14508 198 aa15.63■□□□□ 0.09
SMG6-207ENST00000570756 PSMB4P28070 264 aa15.63■□□□□ 0.09
SMG6-207ENST00000570756 TMED10P49755 219 aaKnown RBP15.63■□□□□ 0.09
SMG6-207ENST00000570756 RGS7P49802 495 aa15.63■□□□□ 0.09
SMG6-207ENST00000570756 ANO4Q32M45 955 aa15.63■□□□□ 0.09
SMG6-207ENST00000570756 ERMP1Q7Z2K6 904 aa15.63■□□□□ 0.09
SMG6-207ENST00000570756 DHFR2Q86XF0 187 aa15.63■□□□□ 0.09
SMG6-207ENST00000570756 SIX6OS1Q8N1H7 587 aa15.63■□□□□ 0.09
SMG6-207ENST00000570756 C1orf127Q8N9H9 656 aa15.63■□□□□ 0.09
SMG6-207ENST00000570756 ANKRD52Q8NB46 1076 aa15.63■□□□□ 0.09
SMG6-207ENST00000570756 MAELQ96JY0 434 aaKnown RBP15.63■□□□□ 0.09
SMG6-207ENST00000570756 SCYL1Q96KG9 808 aa15.63■□□□□ 0.09
SMG6-207ENST00000570756 LGMNQ99538 433 aa15.63■□□□□ 0.09
SMG6-207ENST00000570756 RPF1Q9H9Y2 349 aaKnown RBP15.63■□□□□ 0.09
SMG6-207ENST00000570756 CACNA2D2Q9NY47 1150 aa15.63■□□□□ 0.09
SMG6-207ENST00000570756 GTF2IRD1Q9UHL9 959 aa15.63■□□□□ 0.09
SMG6-207ENST00000570756 XPOTO43592 962 aaKnown RBP15.62■□□□□ 0.09
SMG6-207ENST00000570756 FOXD2O60548 495 aaPredicted RBP15.62■□□□□ 0.09
SMG6-207ENST00000570756 SNAP91O60641 907 aa15.62■□□□□ 0.09
SMG6-207ENST00000570756 FUCA1P04066 466 aa15.62■□□□□ 0.09
SMG6-207ENST00000570756 ARL4AP40617 200 aa15.62■□□□□ 0.09
SMG6-207ENST00000570756 CCR10P46092 362 aa15.62■□□□□ 0.09
SMG6-207ENST00000570756 IFRD2Q12894 506 aaPredicted RBP15.62■□□□□ 0.09
SMG6-207ENST00000570756 LRP8Q14114 963 aa15.62■□□□□ 0.09
SMG6-207ENST00000570756 DGKDQ16760 1214 aa15.62■□□□□ 0.09
SMG6-207ENST00000570756 RGS21Q2M5E4 152 aa15.62■□□□□ 0.09
SMG6-207ENST00000570756 GPR107Q5VW38 600 aa15.62■□□□□ 0.09
SMG6-207ENST00000570756 LRRC8EQ6NSJ5 796 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 346 ms