RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 SPATA24Q86W54 205 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 CPOQ8IVL8 374 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 PPFIBP2Q8ND30 876 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 EXD1Q8NHP7 514 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 FEZF2Q8TBJ5 459 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 DENND1AQ8TEH3 1009 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 SNF8Q96H20 258 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 MAML3Q96JK9 1138 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 CATSPER2Q96P56 530 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 ASB2Q96Q27 587 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 ZIC5Q96T25 663 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 GPR20Q99678 358 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 BTBD10Q9BSF8 475 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 TMEM120AQ9BXJ8 343 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 CDC42EP4Q9H3Q1 356 aaKnown RBP8.2□□□□□ -1.1
TCF4-246ENST00000570287 ADARB2Q9NS39 739 aaKnown RBP8.2□□□□□ -1.1
TCF4-246ENST00000570287 CHST7Q9NS84 486 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 NKIRAS2Q9NYR9 191 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 GSC2O15499 205 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 CCDC22O60826 627 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 PFDN1O60925 122 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 CNMDO75829 334 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 CST3P01034 146 aaPredicted RBP8.2□□□□□ -1.1
TCF4-246ENST00000570287 CALB1P05937 261 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 MMP8P22894 467 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 CETN2P41208 172 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 TNFSF9P41273 254 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 EMP3P54852 163 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 WDR4P57081 412 aaKnown RBP8.2□□□□□ -1.1
TCF4-246ENST00000570287 IL9RQ01113 521 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 CCDC6Q16204 474 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 C2CD6Q53TS8 623 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 CELF3Q5SZQ8 465 aaKnown RBP8.2□□□□□ -1.1
TCF4-246ENST00000570287 ACAD11Q709F0 780 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 CLNKQ7Z7G1 428 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 LURAP1LQ8IV03 231 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 CISD2Q8N5K1 135 aaKnown RBP8.2□□□□□ -1.1
TCF4-246ENST00000570287 NLGN2Q8NFZ4 835 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 ANKRD49Q8WVL7 239 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 DCPSQ96C86 337 aaKnown RBP8.2□□□□□ -1.1
TCF4-246ENST00000570287 ITPKCQ96DU7 683 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 GAS2L1Q99501 681 aaPredicted RBP8.2□□□□□ -1.1
TCF4-246ENST00000570287 ZNF518BQ9C0D4 1074 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 BHLHE41Q9C0J9 482 aaPredicted RBP8.2□□□□□ -1.1
TCF4-246ENST00000570287 PPARGC1AQ9UBK2 798 aaKnown RBP8.2□□□□□ -1.1
TCF4-246ENST00000570287 ASIC3Q9UHC3 531 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 CPSF3Q9UKF6 684 aaKnown RBP8.2□□□□□ -1.1
TCF4-246ENST00000570287 SH3GLB1Q9Y371 365 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 NUMBLQ9Y6R0 609 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 BIRC5O15392 142 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 PRPF4O43172 522 aaKnown RBP eCLIP8.2□□□□□ -1.1
TCF4-246ENST00000570287 RALAP11233 206 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 CPA3P15088 417 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 IVDP26440 423 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 RGS2P41220 211 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 SLC26A2P50443 739 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 SPARCL1Q14515 664 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 TAF1BQ53T94 588 aaPredicted RBP8.2□□□□□ -1.1
TCF4-246ENST00000570287 ERO1BQ86YB8 467 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 DENND1CQ8IV53 801 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 RNF168Q8IYW5 571 aaPredicted RBP8.2□□□□□ -1.1
TCF4-246ENST00000570287 OSBPL8Q9BZF1 889 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 MRPL46Q9H2W6 279 aaKnown RBP8.2□□□□□ -1.1
TCF4-246ENST00000570287 TBCCD1Q9NVR7 557 aa8.2□□□□□ -1.1
TCF4-246ENST00000570287 ZBTB42B2RXF5 422 aa8.19□□□□□ -1.1
TCF4-246ENST00000570287 NOP56O00567 594 aaKnown RBP8.19□□□□□ -1.1
TCF4-246ENST00000570287 MAN1A2O60476 641 aa8.19□□□□□ -1.1
TCF4-246ENST00000570287 ZWINTO95229 277 aa8.19□□□□□ -1.1
TCF4-246ENST00000570287 UBTFL6P0CB48 400 aaPredicted RBP8.19□□□□□ -1.1
TCF4-246ENST00000570287 PROZP22891 400 aa8.19□□□□□ -1.1
TCF4-246ENST00000570287 RAP1GDS1P52306 607 aa8.19□□□□□ -1.1
TCF4-246ENST00000570287 TAS2R40P59535 323 aa8.19□□□□□ -1.1
TCF4-246ENST00000570287 STARD3Q14849 445 aa8.19□□□□□ -1.1
TCF4-246ENST00000570287 R3HDM1Q15032 1099 aaKnown RBP8.19□□□□□ -1.1
TCF4-246ENST00000570287 ADRM1Q16186 407 aa8.19□□□□□ -1.1
TCF4-246ENST00000570287 PDK4Q16654 411 aa8.19□□□□□ -1.1
TCF4-246ENST00000570287 IZUMO3Q5VZ72 239 aa8.19□□□□□ -1.1
TCF4-246ENST00000570287 KAZNQ674X7 775 aa8.19□□□□□ -1.1
TCF4-246ENST00000570287 FSTL4Q6MZW2 842 aa8.19□□□□□ -1.1
TCF4-246ENST00000570287 RNF149Q8NC42 400 aa8.19□□□□□ -1.1
TCF4-246ENST00000570287 BBOF1Q8ND07 529 aa8.19□□□□□ -1.1
TCF4-246ENST00000570287 BVESQ8NE79 360 aa8.19□□□□□ -1.1
TCF4-246ENST00000570287 SUN5Q8TC36 379 aa8.19□□□□□ -1.1
TCF4-246ENST00000570287 ATG4AQ8WYN0 398 aa8.19□□□□□ -1.1
TCF4-246ENST00000570287 ZNF75CPQ92670 426 aaPredicted RBP8.19□□□□□ -1.1
TCF4-246ENST00000570287 DDX50Q9BQ39 737 aaKnown RBP8.19□□□□□ -1.1
TCF4-246ENST00000570287 TUBB6Q9BUF5 446 aa8.19□□□□□ -1.1
TCF4-246ENST00000570287 MTMR12Q9C0I1 747 aa8.19□□□□□ -1.1
TCF4-246ENST00000570287 TIMMDC1Q9NPL8 285 aa8.19□□□□□ -1.1
TCF4-246ENST00000570287 TCF7L2Q9NQB0 619 aa8.19□□□□□ -1.1
TCF4-246ENST00000570287 OLA1Q9NTK5 396 aaKnown RBP8.19□□□□□ -1.1
TCF4-246ENST00000570287 TUBA8Q9NY65 449 aaPredicted RBP8.19□□□□□ -1.1
TCF4-246ENST00000570287 PGPEP1LA6NFU8 196 aa8.19□□□□□ -1.1
TCF4-246ENST00000570287 TMEM191CA6NGB0 347 aa8.19□□□□□ -1.1
TCF4-246ENST00000570287 HRGP04196 525 aa8.19□□□□□ -1.1
TCF4-246ENST00000570287 TMEM191BP0C7N4 346 aa8.19□□□□□ -1.1
TCF4-246ENST00000570287 HNRNPLP14866 589 aaKnown RBP eCLIP8.19□□□□□ -1.1
TCF4-246ENST00000570287 ATF2P15336 505 aa8.19□□□□□ -1.1
TCF4-246ENST00000570287 TSHRP16473 764 aa8.19□□□□□ -1.1
TCF4-246ENST00000570287 MYL6P60660 151 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms