RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 COL6A2P12110 1019 aa17.04■□□□□ 0.32
CMTM3-213ENST00000566756 NCF2P19878 526 aaPredicted RBP17.04■□□□□ 0.32
CMTM3-213ENST00000566756 PAX3P23760 479 aa17.04■□□□□ 0.32
CMTM3-213ENST00000566756 ASPHQ12797 758 aa17.04■□□□□ 0.32
CMTM3-213ENST00000566756 ANO4Q32M45 955 aa17.04■□□□□ 0.32
CMTM3-213ENST00000566756 RALGPS1Q5JS13 557 aa17.04■□□□□ 0.32
CMTM3-213ENST00000566756 RAB41Q5JT25 222 aa17.04■□□□□ 0.32
CMTM3-213ENST00000566756 CES3Q6UWW8 571 aa17.04■□□□□ 0.32
CMTM3-213ENST00000566756 ZYG11AQ6WRX3 759 aa17.04■□□□□ 0.32
CMTM3-213ENST00000566756 LINC00523Q86TU6 105 aa17.04■□□□□ 0.32
CMTM3-213ENST00000566756 SETD3Q86TU7 594 aaPredicted RBP17.04■□□□□ 0.32
CMTM3-213ENST00000566756 ZNF781Q8N8C0 355 aa17.04■□□□□ 0.32
CMTM3-213ENST00000566756 GPR22Q99680 433 aa17.04■□□□□ 0.32
CMTM3-213ENST00000566756 LBHD1Q9BQE6 289 aaPredicted RBP17.04■□□□□ 0.32
CMTM3-213ENST00000566756 ILKAPQ9H0C8 392 aaPredicted RBP17.04■□□□□ 0.32
CMTM3-213ENST00000566756 RGS18Q9NS28 235 aa17.04■□□□□ 0.32
CMTM3-213ENST00000566756 ZNF358Q9NW07 568 aa17.04■□□□□ 0.32
CMTM3-213ENST00000566756 RAP2CQ9Y3L5 183 aa17.04■□□□□ 0.32
CMTM3-213ENST00000566756 DNAH12Q6ZR08 3092 aa17.04■□□□□ 0.32
CMTM3-213ENST00000566756 COL4A4P53420 1690 aaPredicted RBP17.04■□□□□ 0.32
CMTM3-213ENST00000566756 ZBTB24O43167 697 aaPredicted RBP17.04■□□□□ 0.32
CMTM3-213ENST00000566756 SNUPNO95149 360 aaKnown RBP17.04■□□□□ 0.32
CMTM3-213ENST00000566756 THRAP10827 490 aa17.04■□□□□ 0.32
CMTM3-213ENST00000566756 CD68P34810 354 aaPredicted RBP17.04■□□□□ 0.32
CMTM3-213ENST00000566756 NDUFV1P49821 464 aa17.04■□□□□ 0.32
CMTM3-213ENST00000566756 NAPEPLDQ6IQ20 393 aa17.04■□□□□ 0.32
CMTM3-213ENST00000566756 SLC30A9Q6PML9 568 aa17.04■□□□□ 0.32
CMTM3-213ENST00000566756 ZNF598Q86UK7 904 aaKnown RBP17.04■□□□□ 0.32
CMTM3-213ENST00000566756 DEFB107AQ8IZN7 70 aa17.04■□□□□ 0.32
CMTM3-213ENST00000566756 DPF3Q92784 378 aa17.04■□□□□ 0.32
CMTM3-213ENST00000566756 VPS39Q96JC1 886 aa17.04■□□□□ 0.32
CMTM3-213ENST00000566756 MLPHQ9BV36 600 aaPredicted RBP17.04■□□□□ 0.32
CMTM3-213ENST00000566756 KLHL4Q9C0H6 718 aa17.04■□□□□ 0.32
CMTM3-213ENST00000566756 DRC3Q9H069 523 aa17.04■□□□□ 0.32
CMTM3-213ENST00000566756 VTI1BQ9UEU0 232 aa17.04■□□□□ 0.32
CMTM3-213ENST00000566756 VPS28Q9UK41 221 aa17.04■□□□□ 0.32
CMTM3-213ENST00000566756 FAM72CH0Y354 149 aa17.03■□□□□ 0.32
CMTM3-213ENST00000566756 MATN2O00339 956 aa17.03■□□□□ 0.32
CMTM3-213ENST00000566756 CLDN5O00501 218 aa17.03■□□□□ 0.32
CMTM3-213ENST00000566756 CACNG3O60359 315 aa17.03■□□□□ 0.32
CMTM3-213ENST00000566756 PEX19P40855 299 aa17.03■□□□□ 0.32
CMTM3-213ENST00000566756 SCNN1GP51170 649 aa17.03■□□□□ 0.32
CMTM3-213ENST00000566756 AFF1P51825 1210 aaKnown RBP17.03■□□□□ 0.32
CMTM3-213ENST00000566756 TBL3Q12788 808 aaKnown RBP17.03■□□□□ 0.32
CMTM3-213ENST00000566756 CDH17Q12864 832 aa17.03■□□□□ 0.32
CMTM3-213ENST00000566756 PRPSAP1Q14558 356 aa17.03■□□□□ 0.32
CMTM3-213ENST00000566756 HSP90AA5PQ58FG0 334 aa17.03■□□□□ 0.32
CMTM3-213ENST00000566756 VWA5B1Q5TIE3 1220 aa17.03■□□□□ 0.32
CMTM3-213ENST00000566756 FAM72AQ5TYM5 149 aa17.03■□□□□ 0.32
CMTM3-213ENST00000566756 FAM72DQ6L9T8 149 aa17.03■□□□□ 0.32
CMTM3-213ENST00000566756 NAPRTQ6XQN6 538 aa17.03■□□□□ 0.32
CMTM3-213ENST00000566756 FRMD7Q6ZUT3 714 aa17.03■□□□□ 0.32
CMTM3-213ENST00000566756 KBTBD6Q86V97 674 aa17.03■□□□□ 0.32
CMTM3-213ENST00000566756 FAM72BQ86X60 149 aa17.03■□□□□ 0.32
CMTM3-213ENST00000566756 CCDC117Q8IWD4 279 aaPredicted RBP17.03■□□□□ 0.32
CMTM3-213ENST00000566756 TMEM86AQ8N2M4 240 aa17.03■□□□□ 0.32
CMTM3-213ENST00000566756 SLC25A41Q8N5S1 370 aa17.03■□□□□ 0.32
CMTM3-213ENST00000566756 CPSF7Q8N684 471 aaKnown RBP17.03■□□□□ 0.32
CMTM3-213ENST00000566756 TDRD5Q8NAT2 981 aaKnown RBP17.03■□□□□ 0.32
CMTM3-213ENST00000566756 RNF169Q8NCN4 708 aa17.03■□□□□ 0.32
CMTM3-213ENST00000566756 PIP4K2CQ8TBX8 421 aa17.03■□□□□ 0.32
CMTM3-213ENST00000566756 TEKT5Q96M29 485 aa17.03■□□□□ 0.32
CMTM3-213ENST00000566756 TSGA13Q96PP4 275 aa17.03■□□□□ 0.32
CMTM3-213ENST00000566756 AGAP2Q99490 1192 aa17.03■□□□□ 0.32
CMTM3-213ENST00000566756 EPAS1Q99814 870 aa17.03■□□□□ 0.32
CMTM3-213ENST00000566756 KIFC1Q9BW19 673 aa17.03■□□□□ 0.32
CMTM3-213ENST00000566756 ULBP1Q9BZM6 244 aa17.03■□□□□ 0.32
CMTM3-213ENST00000566756 RHOJQ9H4E5 214 aa17.03■□□□□ 0.32
CMTM3-213ENST00000566756 TCF7L2Q9NQB0 619 aa17.03■□□□□ 0.32
CMTM3-213ENST00000566756 PAK6Q9NQU5 681 aaPredicted RBP17.03■□□□□ 0.32
CMTM3-213ENST00000566756 ZNF638Q14966 1978 aaKnown RBP17.03■□□□□ 0.32
CMTM3-213ENST00000566756 FNDC1Q4ZHG4 1894 aaPredicted RBP17.02■□□□□ 0.32
CMTM3-213ENST00000566756 SYNJ2BP-COX16A0A087WUM0 186 aa17.02■□□□□ 0.32
CMTM3-213ENST00000566756 NRP1O14786 923 aa17.02■□□□□ 0.32
CMTM3-213ENST00000566756 HDAC3O15379 428 aa17.02■□□□□ 0.32
CMTM3-213ENST00000566756 DCXO43602 365 aa17.02■□□□□ 0.32
CMTM3-213ENST00000566756 EOMESO95936 686 aa17.02■□□□□ 0.32
CMTM3-213ENST00000566756 LHX1P48742 406 aa17.02■□□□□ 0.32
CMTM3-213ENST00000566756 CLCNKBP51801 687 aa17.02■□□□□ 0.32
CMTM3-213ENST00000566756 COG7P83436 770 aa17.02■□□□□ 0.32
CMTM3-213ENST00000566756 CUL3Q13618 768 aa17.02■□□□□ 0.32
CMTM3-213ENST00000566756 MBTPS1Q14703 1052 aa17.02■□□□□ 0.32
CMTM3-213ENST00000566756 HERC3Q15034 1050 aa17.02■□□□□ 0.32
CMTM3-213ENST00000566756 UPP1Q16831 310 aa17.02■□□□□ 0.32
CMTM3-213ENST00000566756 LIPMQ5VYY2 423 aa17.02■□□□□ 0.32
CMTM3-213ENST00000566756 NAIF1Q69YI7 327 aaPredicted RBP17.02■□□□□ 0.32
CMTM3-213ENST00000566756 HFE2Q6ZVN8 426 aa17.02■□□□□ 0.32
CMTM3-213ENST00000566756 RAPH1Q70E73 1250 aa17.02■□□□□ 0.32
CMTM3-213ENST00000566756 TMEM126BQ8IUX1 230 aa17.02■□□□□ 0.32
CMTM3-213ENST00000566756 TP53INP2Q8IXH6 220 aa17.02■□□□□ 0.32
CMTM3-213ENST00000566756 TNS4Q8IZW8 715 aa17.02■□□□□ 0.32
CMTM3-213ENST00000566756 PHTF2Q8N3S3 785 aa17.02■□□□□ 0.32
CMTM3-213ENST00000566756 GALNT15Q8N3T1 639 aa17.02■□□□□ 0.32
CMTM3-213ENST00000566756 SLC26A7Q8TE54 656 aa17.02■□□□□ 0.32
CMTM3-213ENST00000566756 SENP8Q96LD8 212 aa17.02■□□□□ 0.32
CMTM3-213ENST00000566756 TSNARE1Q96NA8 513 aa17.02■□□□□ 0.32
CMTM3-213ENST00000566756 AGAP3Q96P47 875 aa17.02■□□□□ 0.32
CMTM3-213ENST00000566756 BTBD9Q96Q07 612 aa17.02■□□□□ 0.32
CMTM3-213ENST00000566756 SERPINI1Q99574 410 aa17.02■□□□□ 0.32
CMTM3-213ENST00000566756 MED10Q9BTT4 135 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms