RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 NEPROQ6NW34 567 aa13.78□□□□□ -0.2
CX3CL1-204ENST00000565912 CLVS1Q8IUQ0 354 aaPredicted RBP13.78□□□□□ -0.2
CX3CL1-204ENST00000565912 TEKT5Q96M29 485 aa13.78□□□□□ -0.2
CX3CL1-204ENST00000565912 L2HGDHQ9H9P8 463 aa13.78□□□□□ -0.2
CX3CL1-204ENST00000565912 OR12D3Q9UGF7 316 aa13.78□□□□□ -0.2
CX3CL1-204ENST00000565912 ZNHIT2Q9UHR6 403 aa13.78□□□□□ -0.2
CX3CL1-204ENST00000565912 PSME2Q9UL46 239 aa13.78□□□□□ -0.2
CX3CL1-204ENST00000565912 MKL2Q9ULH7 1088 aa13.78□□□□□ -0.2
CX3CL1-204ENST00000565912 L1RE1Q9UN81 338 aa13.78□□□□□ -0.2
CX3CL1-204ENST00000565912 ZNF232Q9UNY5 417 aa13.78□□□□□ -0.2
CX3CL1-204ENST00000565912 CD3EAPO15446 510 aaKnown RBP13.78□□□□□ -0.2
CX3CL1-204ENST00000565912 ATP6V1G2O95670 118 aa13.78□□□□□ -0.2
CX3CL1-204ENST00000565912 RHAGQ02094 409 aa13.78□□□□□ -0.2
CX3CL1-204ENST00000565912 TRAF3Q13114 568 aa13.78□□□□□ -0.2
CX3CL1-204ENST00000565912 ZC3H12AQ5D1E8 599 aaKnown RBP13.78□□□□□ -0.2
CX3CL1-204ENST00000565912 WSCD1Q658N2 575 aa13.78□□□□□ -0.2
CX3CL1-204ENST00000565912 RAET1GQ6H3X3 334 aa13.78□□□□□ -0.2
CX3CL1-204ENST00000565912 CXorf40BQ96DE9 158 aa13.78□□□□□ -0.2
CX3CL1-204ENST00000565912 REREQ9P2R6 1566 aa13.78□□□□□ -0.2
CX3CL1-204ENST00000565912 TRAV19A0A0A6YYK7 116 aa13.78□□□□□ -0.2
CX3CL1-204ENST00000565912 EFCAB10A6NFE3 127 aa13.78□□□□□ -0.2
CX3CL1-204ENST00000565912 F8VP50 259 aa13.78□□□□□ -0.2
CX3CL1-204ENST00000565912 LGALS2P05162 132 aa13.78□□□□□ -0.2
CX3CL1-204ENST00000565912 CDK7P50613 346 aa13.78□□□□□ -0.2
CX3CL1-204ENST00000565912 PARP6Q2NL67 630 aa13.78□□□□□ -0.2
CX3CL1-204ENST00000565912 SAMD4BQ5PRF9 694 aaKnown RBP13.78□□□□□ -0.2
CX3CL1-204ENST00000565912 EXOC3L1Q86VI1 746 aa13.78□□□□□ -0.2
CX3CL1-204ENST00000565912 DHRSXQ8N5I4 330 aa13.78□□□□□ -0.2
CX3CL1-204ENST00000565912 LRRC39Q96DD0 335 aa13.78□□□□□ -0.2
CX3CL1-204ENST00000565912 DDX20Q9UHI6 824 aaKnown RBP13.78□□□□□ -0.2
CX3CL1-204ENST00000565912 TNPO3Q9Y5L0 923 aaKnown RBP13.78□□□□□ -0.2
CX3CL1-204ENST00000565912 KRT33AO76009 404 aa13.78□□□□□ -0.2
CX3CL1-204ENST00000565912 EPORP19235 508 aa13.78□□□□□ -0.2
CX3CL1-204ENST00000565912 ABL2P42684 1182 aa13.78□□□□□ -0.2
CX3CL1-204ENST00000565912 GSTM5P46439 218 aa13.78□□□□□ -0.2
CX3CL1-204ENST00000565912 PKNOX1P55347 436 aa13.78□□□□□ -0.2
CX3CL1-204ENST00000565912 MSLNQ13421 630 aaPredicted RBP13.78□□□□□ -0.2
CX3CL1-204ENST00000565912 KIAA0408Q6ZU52 694 aa13.78□□□□□ -0.2
CX3CL1-204ENST00000565912 DSELQ8IZU8 1212 aa13.78□□□□□ -0.2
CX3CL1-204ENST00000565912 PNMA5Q96PV4 448 aa13.78□□□□□ -0.2
CX3CL1-204ENST00000565912 MLPHQ9BV36 600 aaPredicted RBP13.78□□□□□ -0.2
CX3CL1-204ENST00000565912 PAIP1Q9H074 479 aaKnown RBP13.78□□□□□ -0.2
CX3CL1-204ENST00000565912 BPIFA1Q9NP55 256 aa13.78□□□□□ -0.2
CX3CL1-204ENST00000565912 TPP1O14773 563 aa13.77□□□□□ -0.2
CX3CL1-204ENST00000565912 EIF4BP23588 611 aaKnown RBP13.77□□□□□ -0.2
CX3CL1-204ENST00000565912 HNF4AP41235 474 aa13.77□□□□□ -0.2
CX3CL1-204ENST00000565912 GPR1P46091 355 aa13.77□□□□□ -0.2
CX3CL1-204ENST00000565912 OAZ1P54368 228 aa13.77□□□□□ -0.2
CX3CL1-204ENST00000565912 SNRPD1P62314 119 aaKnown RBP13.77□□□□□ -0.2
CX3CL1-204ENST00000565912 IFI35P80217 286 aaPredicted RBP13.77□□□□□ -0.2
CX3CL1-204ENST00000565912 SLC34A1Q06495 639 aa13.77□□□□□ -0.2
CX3CL1-204ENST00000565912 IQSEC1Q6DN90 963 aa13.77□□□□□ -0.2
CX3CL1-204ENST00000565912 SLC41A1Q8IVJ1 513 aa13.77□□□□□ -0.2
CX3CL1-204ENST00000565912 PCDH20Q8N6Y1 951 aaKnown RBP13.77□□□□□ -0.2
CX3CL1-204ENST00000565912 RTL3Q8N8U3 475 aaKnown RBP13.77□□□□□ -0.2
CX3CL1-204ENST00000565912 ZNF75CPQ92670 426 aaPredicted RBP13.77□□□□□ -0.2
CX3CL1-204ENST00000565912 ZBTB10Q96DT7 871 aa13.77□□□□□ -0.2
CX3CL1-204ENST00000565912 CORO1BQ9BR76 489 aa13.77□□□□□ -0.2
CX3CL1-204ENST00000565912 C9orf16Q9BUW7 83 aa13.77□□□□□ -0.2
CX3CL1-204ENST00000565912 ETNK2Q9NVF9 386 aa13.77□□□□□ -0.2
CX3CL1-204ENST00000565912 TNS2Q63HR2 1409 aa13.77□□□□□ -0.2
CX3CL1-204ENST00000565912 APOC4-APOC2K7ER74 178 aa13.77□□□□□ -0.2
CX3CL1-204ENST00000565912 APOC2P02655 101 aa13.77□□□□□ -0.2
CX3CL1-204ENST00000565912 LRPAP1P30533 357 aa13.77□□□□□ -0.2
CX3CL1-204ENST00000565912 RRP1BQ14684 758 aaKnown RBP13.77□□□□□ -0.2
CX3CL1-204ENST00000565912 ZC3H7AQ8IWR0 971 aaKnown RBP13.77□□□□□ -0.2
CX3CL1-204ENST00000565912 ZNF276Q8N554 614 aa13.77□□□□□ -0.2
CX3CL1-204ENST00000565912 OR52K1Q8NGK4 314 aa13.77□□□□□ -0.2
CX3CL1-204ENST00000565912 WNT8BQ93098 351 aa13.77□□□□□ -0.2
CX3CL1-204ENST00000565912 PSMB4P28070 264 aa13.77□□□□□ -0.21
CX3CL1-204ENST00000565912 RPL14P50914 215 aaKnown RBP13.77□□□□□ -0.21
CX3CL1-204ENST00000565912 C15orf59Q2T9L4 293 aaPredicted RBP13.77□□□□□ -0.21
CX3CL1-204ENST00000565912 MYRFQ9Y2G1 1151 aa13.77□□□□□ -0.21
CX3CL1-204ENST00000565912 COL5A2P05997 1499 aaPredicted RBP13.77□□□□□ -0.21
CX3CL1-204ENST00000565912 C15orf38-AP3S2A0A0A6YYH1 394 aa13.77□□□□□ -0.21
CX3CL1-204ENST00000565912 WNT10BO00744 389 aa13.77□□□□□ -0.21
CX3CL1-204ENST00000565912 STX11O75558 287 aa13.77□□□□□ -0.21
CX3CL1-204ENST00000565912 MTAPQ13126 283 aa13.77□□□□□ -0.21
CX3CL1-204ENST00000565912 NAB1Q13506 487 aa13.77□□□□□ -0.21
CX3CL1-204ENST00000565912 CNGA2Q16280 664 aa13.77□□□□□ -0.21
CX3CL1-204ENST00000565912 NDUFAF6Q330K2 333 aa13.77□□□□□ -0.21
CX3CL1-204ENST00000565912 WASHC2DQ5SRD0 308 aa13.77□□□□□ -0.21
CX3CL1-204ENST00000565912 HECTD3Q5T447 861 aa13.77□□□□□ -0.21
CX3CL1-204ENST00000565912 ARPINQ7Z6K5 226 aa13.77□□□□□ -0.21
CX3CL1-204ENST00000565912 ZNF557Q8N988 423 aaPredicted RBP13.77□□□□□ -0.21
CX3CL1-204ENST00000565912 COG5Q9UP83 839 aa13.77□□□□□ -0.21
CX3CL1-204ENST00000565912 OR10H1Q9Y4A9 318 aa13.77□□□□□ -0.21
CX3CL1-204ENST00000565912 SLC9A3R1O14745 358 aaPredicted RBP13.77□□□□□ -0.21
CX3CL1-204ENST00000565912 SGTAO43765 313 aa13.77□□□□□ -0.21
CX3CL1-204ENST00000565912 NOS2P35228 1153 aa13.77□□□□□ -0.21
CX3CL1-204ENST00000565912 ARMC3Q5W041 872 aa13.77□□□□□ -0.21
CX3CL1-204ENST00000565912 TMC3Q7Z5M5 1100 aa13.77□□□□□ -0.21
CX3CL1-204ENST00000565912 ZNF558Q96NG5 402 aa13.77□□□□□ -0.21
CX3CL1-204ENST00000565912 FBXO6Q9NRD1 293 aaPredicted RBP13.77□□□□□ -0.21
CX3CL1-204ENST00000565912 IL17RBQ9NRM6 502 aa13.77□□□□□ -0.21
CX3CL1-204ENST00000565912 ATAD3AQ9NVI7 634 aa13.77□□□□□ -0.21
CX3CL1-204ENST00000565912 GNPTGQ9UJJ9 305 aa13.77□□□□□ -0.21
CX3CL1-204ENST00000565912 DNMT3LQ9UJW3 386 aa13.77□□□□□ -0.21
CX3CL1-204ENST00000565912 DDX3XO00571 662 aaKnown RBP eCLIP13.76□□□□□ -0.218e-14■■■■□ 23.2
CX3CL1-204ENST00000565912 ASNA1O43681 348 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms