RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 SMAD6O43541 496 aaKnown RBP12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 BNIP3LO60238 219 aa12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 CTSLP07711 333 aa12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 CCDC172P0C7W6 258 aa12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 KRT3P12035 628 aa12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 RHOQP17081 205 aa12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 RRM1P23921 792 aa12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 MAT2AP31153 395 aaKnown RBP12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 AKT2P31751 481 aa12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 ANP32AP39687 249 aaKnown RBP12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 SERPINH1P50454 418 aaKnown RBP12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 METAP1P53582 386 aa12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 FMO1Q01740 532 aa12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 ZNF284Q2VY69 593 aa12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 CCDC14Q49A88 953 aa12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 CARD16Q5EG05 197 aa12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 ARSIQ5FYB1 569 aa12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 PRAMEF14Q5SWL7 426 aa12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 ARTNQ5T4W7 220 aa12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 SFMBT2Q5VUG0 894 aa12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 TRNP1Q6NT89 227 aa12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 C22orf39Q6P5X5 142 aa12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 SASS6Q6UVJ0 657 aa12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 DPY19L3Q6ZPD9 716 aa12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 FAM131BQ86XD5 332 aa12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 SPATS2Q86XZ4 545 aaKnown RBP12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 GATAD2AQ86YP4 633 aa12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 EID2Q8N6I1 236 aa12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 RXFP2Q8WXD0 754 aa12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 TSC1Q92574 1164 aa12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 RAB7BQ96AH8 199 aa12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 FEM1CQ96JP0 617 aa12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 HEPHQ9BQS7 1158 aa12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 MAGEH1Q9H213 219 aa12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 ATP13A1Q9HD20 1204 aa12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 LIMA1Q9UHB6 759 aaKnown RBP12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 HPCAL4Q9UM19 191 aa12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 SNX10Q9Y5X0 201 aa12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 ZFHX4Q86UP3 3567 aa12.44□□□□□ -0.42
GTF3C1-204ENST00000564664 DOCK4Q8N1I0 1966 aa12.43□□□□□ -0.42
GTF3C1-204ENST00000564664 URB1O60287 2271 aaKnown RBP12.43□□□□□ -0.42
GTF3C1-204ENST00000564664 TRABD2BA6NFA1 517 aa12.43□□□□□ -0.42
GTF3C1-204ENST00000564664 ZSCAN5CA6NGD5 496 aaPredicted RBP12.43□□□□□ -0.42
GTF3C1-204ENST00000564664 RIOK3O14730 519 aaKnown RBP12.43□□□□□ -0.42
GTF3C1-204ENST00000564664 AP1G1O43747 822 aa12.43□□□□□ -0.42
GTF3C1-204ENST00000564664 ZNF821O75541 412 aaPredicted RBP12.43□□□□□ -0.42
GTF3C1-204ENST00000564664 LEFTY1O75610 366 aa12.43□□□□□ -0.42
GTF3C1-204ENST00000564664 RFPL3O75679 317 aa12.43□□□□□ -0.42
GTF3C1-204ENST00000564664 CALB1P05937 261 aa12.43□□□□□ -0.42
GTF3C1-204ENST00000564664 UNGP13051 313 aaPredicted RBP12.43□□□□□ -0.42
GTF3C1-204ENST00000564664 CKMT2P17540 419 aa12.43□□□□□ -0.42
GTF3C1-204ENST00000564664 CHRNB2P17787 502 aa12.43□□□□□ -0.42
GTF3C1-204ENST00000564664 HNRNPA2B1P22626 353 aaKnown RBP12.43□□□□□ -0.42
GTF3C1-204ENST00000564664 ITGB7P26010 798 aa12.43□□□□□ -0.42
GTF3C1-204ENST00000564664 L1CAMP32004 1257 aa12.43□□□□□ -0.42
GTF3C1-204ENST00000564664 HNF1BP35680 557 aa12.43□□□□□ -0.42
GTF3C1-204ENST00000564664 NSFP46459 744 aaKnown RBP12.43□□□□□ -0.42
GTF3C1-204ENST00000564664 NUMBP49757 651 aa12.43□□□□□ -0.42
GTF3C1-204ENST00000564664 RPS21P63220 83 aaKnown RBP12.43□□□□□ -0.42
GTF3C1-204ENST00000564664 ATP11AP98196 1134 aa12.43□□□□□ -0.42
GTF3C1-204ENST00000564664 BNIP3Q12983 259 aa12.43□□□□□ -0.42
GTF3C1-204ENST00000564664 ZNF211Q13398 564 aaPredicted RBP12.43□□□□□ -0.42
GTF3C1-204ENST00000564664 CAMK2BQ13554 666 aa12.43□□□□□ -0.42
GTF3C1-204ENST00000564664 SYCP1Q15431 976 aa12.43□□□□□ -0.42
GTF3C1-204ENST00000564664 HS1BP3Q53T59 392 aa12.43□□□□□ -0.42
GTF3C1-204ENST00000564664 C2CD6Q53TS8 623 aa12.43□□□□□ -0.42
GTF3C1-204ENST00000564664 KIAA1161Q6NSJ0 714 aa12.43□□□□□ -0.42
GTF3C1-204ENST00000564664 PPP1R2P3Q6NXS1 205 aa12.43□□□□□ -0.42
GTF3C1-204ENST00000564664 LINGO4Q6UY18 593 aa12.43□□□□□ -0.42
GTF3C1-204ENST00000564664 KANSL1Q7Z3B3 1105 aa12.43□□□□□ -0.42
GTF3C1-204ENST00000564664 PHF13Q86YI8 300 aaPredicted RBP12.43□□□□□ -0.42
GTF3C1-204ENST00000564664 OR7D4Q8NG98 312 aa12.43□□□□□ -0.42
GTF3C1-204ENST00000564664 SLC20A1Q8WUM9 679 aa12.43□□□□□ -0.42
GTF3C1-204ENST00000564664 ASB12Q8WXK4 309 aa12.43□□□□□ -0.42
GTF3C1-204ENST00000564664 NTAN1Q96AB6 310 aa12.43□□□□□ -0.42
GTF3C1-204ENST00000564664 ARRDC3Q96B67 414 aa12.43□□□□□ -0.42
GTF3C1-204ENST00000564664 METTL5Q9NRN9 209 aaKnown RBP12.43□□□□□ -0.42
GTF3C1-204ENST00000564664 FAM207AQ9NSI2 230 aaPredicted RBP12.43□□□□□ -0.42
GTF3C1-204ENST00000564664 FANCLQ9NW38 375 aa12.43□□□□□ -0.42
GTF3C1-204ENST00000564664 TMEM248Q9NWD8 314 aa12.43□□□□□ -0.42
GTF3C1-204ENST00000564664 DONSONQ9NYP3 566 aa12.43□□□□□ -0.42
GTF3C1-204ENST00000564664 ADAM22Q9P0K1 906 aa12.43□□□□□ -0.42
GTF3C1-204ENST00000564664 SIK3Q9Y2K2 1263 aa12.43□□□□□ -0.42
GTF3C1-204ENST00000564664 NYNRINQ9P2P1 1898 aaKnown RBP12.42□□□□□ -0.42
GTF3C1-204ENST00000564664 ARID1BQ8NFD5 2236 aaPredicted RBP12.42□□□□□ -0.42
GTF3C1-204ENST00000564664 SIGLEC16A6NMB1 481 aa12.42□□□□□ -0.42
GTF3C1-204ENST00000564664 LGALS16A8MUM7 142 aa12.42□□□□□ -0.42
GTF3C1-204ENST00000564664 GOLGA6L22H0YM25 854 aa12.42□□□□□ -0.42
GTF3C1-204ENST00000564664 SLC31A1O15431 190 aa12.42□□□□□ -0.42
GTF3C1-204ENST00000564664 PCDH8O95206 1070 aa12.42□□□□□ -0.42
GTF3C1-204ENST00000564664 PLEKP08567 350 aaPredicted RBP12.42□□□□□ -0.42
GTF3C1-204ENST00000564664 JUPP14923 745 aa12.42□□□□□ -0.42
GTF3C1-204ENST00000564664 CDK11BP21127 795 aaKnown RBP12.42□□□□□ -0.42
GTF3C1-204ENST00000564664 ACP1P24666 158 aa12.42□□□□□ -0.42
GTF3C1-204ENST00000564664 NEK3P51956 506 aa12.42□□□□□ -0.42
GTF3C1-204ENST00000564664 COPB1P53618 953 aaKnown RBP12.42□□□□□ -0.42
GTF3C1-204ENST00000564664 AIF1P55008 147 aa12.42□□□□□ -0.42
GTF3C1-204ENST00000564664 ARF5P84085 180 aa12.42□□□□□ -0.42
GTF3C1-204ENST00000564664 E2F1Q01094 437 aa12.42□□□□□ -0.42
GTF3C1-204ENST00000564664 MYL5Q02045 173 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms