RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 TKTL2Q9H0I9 626 aa14.42□□□□□ -0.1
CDR2-204ENST00000564542 SYNCQ9H7C4 482 aa14.42□□□□□ -0.1
CDR2-204ENST00000564542 USP29Q9HBJ7 922 aa14.42□□□□□ -0.1
CDR2-204ENST00000564542 GPR27Q9NS67 375 aa14.42□□□□□ -0.1
CDR2-204ENST00000564542 RRN3Q9NYV6 651 aa14.42□□□□□ -0.1
CDR2-204ENST00000564542 IL36AQ9UHA7 158 aa14.42□□□□□ -0.1
CDR2-204ENST00000564542 ZFR2Q9UPR6 939 aaKnown RBP14.42□□□□□ -0.1
CDR2-204ENST00000564542 FLNBO75369 2602 aaKnown RBP14.42□□□□□ -0.1
CDR2-204ENST00000564542 TENM4Q6N022 2769 aa14.41□□□□□ -0.1
CDR2-204ENST00000564542 A0A0D9SEW6 157 aa14.41□□□□□ -0.1
CDR2-204ENST00000564542 NEMP2A6NFY4 417 aa14.41□□□□□ -0.1
CDR2-204ENST00000564542 I6L893 689 aaPredicted RBP14.41□□□□□ -0.1
CDR2-204ENST00000564542 RNF103O00237 685 aa14.41□□□□□ -0.1
CDR2-204ENST00000564542 SMAD6O43541 496 aaKnown RBP14.41□□□□□ -0.1
CDR2-204ENST00000564542 DXOO77932 396 aaKnown RBP14.41□□□□□ -0.1
CDR2-204ENST00000564542 PCDH8O95206 1070 aa14.41□□□□□ -0.1
CDR2-204ENST00000564542 ZIC2O95409 532 aaPredicted RBP14.41□□□□□ -0.1
CDR2-204ENST00000564542 ADCY5O95622 1261 aa14.41□□□□□ -0.1
CDR2-204ENST00000564542 SLC9A1P19634 815 aa14.41□□□□□ -0.1
CDR2-204ENST00000564542 CXCR3P49682 368 aa14.41□□□□□ -0.1
CDR2-204ENST00000564542 CLDN2P57739 230 aa14.41□□□□□ -0.1
CDR2-204ENST00000564542 GABREP78334 506 aa14.41□□□□□ -0.1
CDR2-204ENST00000564542 APBA1Q02410 837 aa14.41□□□□□ -0.1
CDR2-204ENST00000564542 PTK2Q05397 1052 aa14.41□□□□□ -0.1
CDR2-204ENST00000564542 SEL1L3Q68CR1 1132 aa14.41□□□□□ -0.1
CDR2-204ENST00000564542 KIAA1161Q6NSJ0 714 aa14.41□□□□□ -0.1
CDR2-204ENST00000564542 GBP6Q6ZN66 633 aa14.41□□□□□ -0.1
CDR2-204ENST00000564542 DCP2Q8IU60 420 aaKnown RBP14.41□□□□□ -0.1
CDR2-204ENST00000564542 ZDHHC17Q8IUH5 632 aa14.41□□□□□ -0.1
CDR2-204ENST00000564542 LSMEM2Q8N112 164 aa14.41□□□□□ -0.1
CDR2-204ENST00000564542 ZNF843Q8N446 348 aa14.41□□□□□ -0.1
CDR2-204ENST00000564542 FAM181AQ8N9Y4 354 aa14.41□□□□□ -0.1
CDR2-204ENST00000564542 CHST14Q8NCH0 376 aa14.41□□□□□ -0.1
CDR2-204ENST00000564542 PGAP3Q96FM1 320 aaPredicted RBP14.41□□□□□ -0.1
CDR2-204ENST00000564542 DUSP23Q9BVJ7 150 aa14.41□□□□□ -0.1
CDR2-204ENST00000564542 WDCPQ9H6R7 721 aa14.41□□□□□ -0.1
CDR2-204ENST00000564542 ANLNQ9NQW6 1124 aa14.41□□□□□ -0.1
CDR2-204ENST00000564542 EVA1BQ9NVM1 165 aa14.41□□□□□ -0.1
CDR2-204ENST00000564542 STAP1Q9ULZ2 295 aa14.41□□□□□ -0.1
CDR2-204ENST00000564542 PAXBP1Q9Y5B6 917 aa14.41□□□□□ -0.1
CDR2-204ENST00000564542 ZNF462Q96JM2 2506 aa14.41□□□□□ -0.1
CDR2-204ENST00000564542 IGLV3-10A0A075B6K4 115 aa14.4□□□□□ -0.1
CDR2-204ENST00000564542 LY6G6EA0A0G2JKS1 128 aa14.4□□□□□ -0.1
CDR2-204ENST00000564542 GTPBP10A4D1E9 387 aaKnown RBP14.4□□□□□ -0.1
CDR2-204ENST00000564542 DRGXA6NNA5 263 aa14.4□□□□□ -0.1
CDR2-204ENST00000564542 ERVH48-1M5A8F1 160 aa14.4□□□□□ -0.1
CDR2-204ENST00000564542 SCAMP1O15126 338 aa14.4□□□□□ -0.1
CDR2-204ENST00000564542 LZTS3O60299 673 aaPredicted RBP14.4□□□□□ -0.1
CDR2-204ENST00000564542 USP12O75317 370 aa14.4□□□□□ -0.1
CDR2-204ENST00000564542 CSO75390 466 aaKnown RBP14.4□□□□□ -0.1
CDR2-204ENST00000564542 LEFTY1O75610 366 aa14.4□□□□□ -0.1
CDR2-204ENST00000564542 MPOP05164 745 aa14.4□□□□□ -0.1
CDR2-204ENST00000564542 PLA2G2AP14555 144 aa14.4□□□□□ -0.1
CDR2-204ENST00000564542 KRT9P35527 623 aa14.4□□□□□ -0.1
CDR2-204ENST00000564542 RECQLP46063 649 aaPredicted RBP14.4□□□□□ -0.1
CDR2-204ENST00000564542 SULT1E1P49888 294 aa14.4□□□□□ -0.1
CDR2-204ENST00000564542 DUSP3P51452 185 aaPredicted RBP14.4□□□□□ -0.1
CDR2-204ENST00000564542 NEK3P51956 506 aa14.4□□□□□ -0.1
CDR2-204ENST00000564542 UCNP55089 124 aa14.4□□□□□ -0.1
CDR2-204ENST00000564542 TMPRSS3P57727 454 aa14.4□□□□□ -0.1
CDR2-204ENST00000564542 ERVPABLB-1P60509 514 aa14.4□□□□□ -0.1
CDR2-204ENST00000564542 HNRNPKP61978 463 aaKnown RBP eCLIP14.4□□□□□ -0.17e-7■□□□□ 11
CDR2-204ENST00000564542 EXOC3L4Q17RC7 722 aa14.4□□□□□ -0.1
CDR2-204ENST00000564542 ARSIQ5FYB1 569 aa14.4□□□□□ -0.1
CDR2-204ENST00000564542 ACBD5Q5T8D3 534 aaPredicted RBP14.4□□□□□ -0.1
CDR2-204ENST00000564542 PCSK4Q6UW60 755 aa14.4□□□□□ -0.1
CDR2-204ENST00000564542 LINGO4Q6UY18 593 aa14.4□□□□□ -0.1
CDR2-204ENST00000564542 KYAT3Q6YP21 454 aaKnown RBP14.4□□□□□ -0.1
CDR2-204ENST00000564542 DPY19L3Q6ZPD9 716 aa14.4□□□□□ -0.1
CDR2-204ENST00000564542 Q6ZSR6 202 aa14.4□□□□□ -0.1
CDR2-204ENST00000564542 PTAR1Q7Z6K3 402 aaPredicted RBP14.4□□□□□ -0.1
CDR2-204ENST00000564542 TFAP2DQ7Z6R9 452 aa14.4□□□□□ -0.1
CDR2-204ENST00000564542 NT5C3BQ969T7 300 aa14.4□□□□□ -0.1
CDR2-204ENST00000564542 TNKS2Q9H2K2 1166 aa14.4□□□□□ -0.1
CDR2-204ENST00000564542 CAAP1Q9H8G2 361 aa14.4□□□□□ -0.1
CDR2-204ENST00000564542 DNAJC28Q9NX36 388 aa14.4□□□□□ -0.1
CDR2-204ENST00000564542 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.4□□□□□ -0.1
CDR2-204ENST00000564542 HS3ST3A1Q9Y663 406 aa14.4□□□□□ -0.1
CDR2-204ENST00000564542 U3KQA8 63 aa14.4□□□□□ -0.1
CDR2-204ENST00000564542 TDRD6O60522 2096 aaKnown RBP14.39□□□□□ -0.11
CDR2-204ENST00000564542 K7ESM1 405 aa14.39□□□□□ -0.11
CDR2-204ENST00000564542 ZNF821O75541 412 aaPredicted RBP14.39□□□□□ -0.11
CDR2-204ENST00000564542 F9P00740 461 aa14.39□□□□□ -0.11
CDR2-204ENST00000564542 ADRB3P13945 408 aa14.39□□□□□ -0.11
CDR2-204ENST00000564542 NME1P15531 152 aaKnown RBP14.39□□□□□ -0.11
CDR2-204ENST00000564542 TFE3P19532 575 aaPredicted RBP14.39□□□□□ -0.11
CDR2-204ENST00000564542 ITGB7P26010 798 aa14.39□□□□□ -0.11
CDR2-204ENST00000564542 PON1P27169 355 aa14.39□□□□□ -0.11
CDR2-204ENST00000564542 OR1E1P30953 314 aa14.39□□□□□ -0.11
CDR2-204ENST00000564542 LSSP48449 732 aa14.39□□□□□ -0.11
CDR2-204ENST00000564542 SERPINH1P50454 418 aaKnown RBP14.39□□□□□ -0.11
CDR2-204ENST00000564542 RPS21P63220 83 aaKnown RBP14.39□□□□□ -0.11
CDR2-204ENST00000564542 ZNF542PQ5EBM4 170 aa14.39□□□□□ -0.11
CDR2-204ENST00000564542 BROXQ5VW32 411 aa14.39□□□□□ -0.11
CDR2-204ENST00000564542 LRRC31Q6UY01 552 aa14.39□□□□□ -0.11
CDR2-204ENST00000564542 ZNF783Q6ZMS7 281 aa14.39□□□□□ -0.11
CDR2-204ENST00000564542 SLC47A2Q86VL8 602 aa14.39□□□□□ -0.11
CDR2-204ENST00000564542 ZSCAN30Q86W11 494 aa14.39□□□□□ -0.11
CDR2-204ENST00000564542 PARGQ86W56 976 aa14.39□□□□□ -0.11
CDR2-204ENST00000564542 ZNF548Q8NEK5 533 aaPredicted RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms