RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 CHADO15335 359 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 MGEA5O60502 916 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 SULT1C4O75897 302 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 SERPINE1P05121 402 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 KRT19P08727 400 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 FGF3P11487 239 aaPredicted RBP11.25□□□□□ -0.61
TCF4-222ENST00000564228 ZNF26P17031 533 aaPredicted RBP11.25□□□□□ -0.61
TCF4-222ENST00000564228 RXRGP48443 463 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 AP3M2P53677 418 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 GDF10P55107 478 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 MRPS22P82650 360 aaKnown RBP11.25□□□□□ -0.61
TCF4-222ENST00000564228 KLF10Q13118 480 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 PIGHQ14442 188 aaPredicted RBP11.25□□□□□ -0.61
TCF4-222ENST00000564228 KCNJ11Q14654 390 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 MBTPS1Q14703 1052 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 TMEM132DQ14C87 1099 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 ACAP1Q15027 740 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 CYTH1Q15438 398 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 MOGQ16653 247 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 ANKDD1AQ495B1 522 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 FASTKD1Q53R41 847 aaKnown RBP11.25□□□□□ -0.61
TCF4-222ENST00000564228 PIGGQ5H8A4 983 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 WDR44Q5JSH3 913 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 GLRA4Q5JXX5 417 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 TRAF7Q6Q0C0 670 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 ISLR2Q6UXK2 745 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 BNC2Q6ZN30 1099 aaPredicted RBP11.25□□□□□ -0.61
TCF4-222ENST00000564228 MAVSQ7Z434 540 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 PPM1NQ8N819 430 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 SMG8Q8ND04 991 aaKnown RBP11.25□□□□□ -0.61
TCF4-222ENST00000564228 TBC1D15Q8TC07 691 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 ACTL9Q8TC94 416 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 ACMSDQ8TDX5 336 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 STARD8Q92502 1023 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 PAWRQ96IZ0 340 aaKnown RBP11.25□□□□□ -0.61
TCF4-222ENST00000564228 PKP2Q99959 881 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 HEPHQ9BQS7 1158 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 TMEM106CQ9BVX2 250 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 COPS7BQ9H9Q2 264 aaPredicted RBP11.25□□□□□ -0.61
TCF4-222ENST00000564228 CHST12Q9NRB3 414 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 FAM105AQ9NUU6 356 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 UTP6Q9NYH9 597 aaKnown RBP11.25□□□□□ -0.61
TCF4-222ENST00000564228 TSC22D4Q9Y3Q8 395 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 AP4S1Q9Y587 144 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 HEMK1Q9Y5R4 338 aaPredicted RBP11.25□□□□□ -0.61
TCF4-222ENST00000564228 C3orf70A6NLC5 250 aaPredicted RBP11.25□□□□□ -0.61
TCF4-222ENST00000564228 K7EPI3 171 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 PSMD12O00232 456 aaPredicted RBP11.25□□□□□ -0.61
TCF4-222ENST00000564228 ZNF195O14628 629 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 BCAS2O75934 225 aaPredicted RBP11.25□□□□□ -0.61
TCF4-222ENST00000564228 ZBTB11O95625 1053 aaPredicted RBP11.25□□□□□ -0.61
TCF4-222ENST00000564228 CST3P01034 146 aaPredicted RBP11.25□□□□□ -0.61
TCF4-222ENST00000564228 SELPP16109 830 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 NDST2P52849 883 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 TLE2Q04725 743 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 ZBTB17Q13105 803 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 DPYSL3Q14195 570 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 PDK1Q15118 436 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 FAXCQ5TGI0 409 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 ITPRIPL1Q6GPH6 555 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 SPOPLQ6IQ16 392 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 SETD3Q86TU7 594 aaPredicted RBP11.25□□□□□ -0.61
TCF4-222ENST00000564228 CLVS1Q8IUQ0 354 aaPredicted RBP11.25□□□□□ -0.61
TCF4-222ENST00000564228 C12orf43Q96C57 262 aaKnown RBP11.25□□□□□ -0.61
TCF4-222ENST00000564228 LRRC39Q96DD0 335 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 THAP11Q96EK4 314 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 SLC13A1Q9BZW2 595 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 ATAD3AQ9NVI7 634 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 GID8Q9NWU2 228 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 ATP11BQ9Y2G3 1177 aa11.25□□□□□ -0.61
TCF4-222ENST00000564228 XPO1O14980 1071 aaKnown RBP11.24□□□□□ -0.61
TCF4-222ENST00000564228 GSRP00390 522 aa11.24□□□□□ -0.61
TCF4-222ENST00000564228 ITGB3P05106 788 aa11.24□□□□□ -0.61
TCF4-222ENST00000564228 COL6A1P12109 1028 aa11.24□□□□□ -0.61
TCF4-222ENST00000564228 TCF4P15884 667 aa11.24□□□□□ -0.61
TCF4-222ENST00000564228 HARS2P49590 506 aaKnown RBP11.24□□□□□ -0.61
TCF4-222ENST00000564228 NEK2P51955 445 aa11.24□□□□□ -0.61
TCF4-222ENST00000564228 MYL6P60660 151 aa11.24□□□□□ -0.61
TCF4-222ENST00000564228 ZNF252P-AS1Q0IIN9 211 aa11.24□□□□□ -0.61
TCF4-222ENST00000564228 MGAT5BQ3V5L5 792 aa11.24□□□□□ -0.61
TCF4-222ENST00000564228 ANKRD33Q7Z3H0 272 aa11.24□□□□□ -0.61
TCF4-222ENST00000564228 NANOGNBQ7Z5D8 188 aa11.24□□□□□ -0.61
TCF4-222ENST00000564228 ZNF354CQ86Y25 554 aa11.24□□□□□ -0.61
TCF4-222ENST00000564228 CTAGE3PQ8IX95 158 aa11.24□□□□□ -0.61
TCF4-222ENST00000564228 NDUFAF2Q8N183 169 aa11.24□□□□□ -0.61
TCF4-222ENST00000564228 GALNT4Q8N4A0 578 aa11.24□□□□□ -0.61
TCF4-222ENST00000564228 KYQ8NBH2 561 aa11.24□□□□□ -0.61
TCF4-222ENST00000564228 RNF169Q8NCN4 708 aa11.24□□□□□ -0.61
TCF4-222ENST00000564228 TRUB1Q8WWH5 349 aaKnown RBP11.24□□□□□ -0.61
TCF4-222ENST00000564228 CNDP1Q96KN2 507 aa11.24□□□□□ -0.61
TCF4-222ENST00000564228 ADAM2Q99965 735 aa11.24□□□□□ -0.61
TCF4-222ENST00000564228 HGH1Q9BTY7 390 aa11.24□□□□□ -0.61
TCF4-222ENST00000564228 ANKRD60Q9BZ19 345 aa11.24□□□□□ -0.61
TCF4-222ENST00000564228 IMPG2Q9BZV3 1241 aa11.24□□□□□ -0.61
TCF4-222ENST00000564228 MCOLN1Q9GZU1 580 aa11.24□□□□□ -0.61
TCF4-222ENST00000564228 C11orf49Q9H6J7 331 aa11.24□□□□□ -0.61
TCF4-222ENST00000564228 PLEKHA5Q9HAU0 1116 aa11.24□□□□□ -0.61
TCF4-222ENST00000564228 OLAHQ9NV23 265 aa11.24□□□□□ -0.61
TCF4-222ENST00000564228 TRNAU1APQ9NX07 287 aaKnown RBP11.24□□□□□ -0.61
TCF4-222ENST00000564228 TMEM9Q9P0T7 183 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms