RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 STBD1O95210 358 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 PIGNO95427 931 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 TFAP2AP05549 437 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 SMIM18P0DKX4 95 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 THRAP10827 490 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 MYL4P12829 197 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 ADRA1BP35368 520 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 NR1H2P55055 460 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 HDAC4P56524 1084 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 CTBP1Q13363 440 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 SH2D5Q6ZV89 423 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 ZBTB8BQ8NAP8 495 aaPredicted RBP10.62□□□□□ -0.71
RNF40-204ENST00000563683 HAUS8Q9BT25 410 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 ZFYVE28Q9HCC9 887 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 TMPRSS4Q9NRS4 437 aa10.62□□□□□ -0.71
RNF40-204ENST00000563683 TPST1O60507 370 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 BPGMP07738 259 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 CDK4P11802 303 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 LILRA4P59901 499 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 PPIDQ08752 370 aaKnown RBP10.61□□□□□ -0.71
RNF40-204ENST00000563683 MAPRE1Q15691 268 aaKnown RBP10.61□□□□□ -0.71
RNF40-204ENST00000563683 SLC44A4Q53GD3 710 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 OGFRL1Q5TC84 451 aaPredicted RBP10.61□□□□□ -0.71
RNF40-204ENST00000563683 C16orf89Q6UX73 402 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 FRA10AC1Q70Z53 315 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 CALML6Q8TD86 181 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 GRIP2Q9C0E4 1043 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 MKS1Q9NXB0 559 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 ST3GAL5Q9UNP4 418 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 ABCA3Q99758 1704 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 SLC15A5A6NIM6 579 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 MDM4O15151 490 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 TRMUO75648 421 aaKnown RBP10.61□□□□□ -0.71
RNF40-204ENST00000563683 ENDOD1O94919 500 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 ATP6V1B1P15313 513 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 EEF1B2P24534 225 aaKnown RBP10.61□□□□□ -0.71
RNF40-204ENST00000563683 BRCC3P46736 316 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 ZNF132P52740 706 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 TAF2Q6P1X5 1199 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 STRADAQ7RTN6 431 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 DCP1BQ8IZD4 617 aaKnown RBP10.61□□□□□ -0.71
RNF40-204ENST00000563683 MFSD3Q96ES6 412 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 MARK4Q96L34 752 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 ZNF696Q9H7X3 374 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 SNX15Q9NRS6 342 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 PSMD13Q9UNM6 376 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 POMPQ9Y244 141 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 SNX10Q9Y5X0 201 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 AK5Q9Y6K8 562 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 GNGT2O14610 69 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 XPO1O14980 1071 aaKnown RBP10.61□□□□□ -0.71
RNF40-204ENST00000563683 SH3BP5O60239 455 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 TSPAN3O60637 253 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 NDUFS3O75489 264 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 TOMM70O94826 608 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 DDHD2O94830 711 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 APOA4P06727 396 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 ABCE1P61221 599 aaKnown RBP10.61□□□□□ -0.71
RNF40-204ENST00000563683 CBX3Q13185 183 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 CCDC153Q494R4 210 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 ZNF618Q5T7W0 954 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 VWA5B1Q5TIE3 1220 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 SDHAF4Q5VUM1 108 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 TMEM126BQ8IUX1 230 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 FBXW8Q8N3Y1 598 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 CDC26Q8NHZ8 85 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.61□□□□□ -0.712e-7■■■■■ 62.8
RNF40-204ENST00000563683 DCUN1D1Q96GG9 259 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 ADAM2Q99965 735 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 BCO2Q9BYV7 579 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 PNPLA8Q9NP80 782 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 CHRAC1Q9NRG0 131 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 NCKIPSDQ9NZQ3 722 aa10.61□□□□□ -0.71
RNF40-204ENST00000563683 SLX4Q8IY92 1834 aa10.6□□□□□ -0.71
RNF40-204ENST00000563683 MAGEB16A2A368 324 aa10.6□□□□□ -0.71
RNF40-204ENST00000563683 SNNO75324 88 aaPredicted RBP10.6□□□□□ -0.71
RNF40-204ENST00000563683 SEC24DO94855 1032 aaPredicted RBP10.6□□□□□ -0.71
RNF40-204ENST00000563683 TOP3BO95985 862 aaKnown RBP10.6□□□□□ -0.71
RNF40-204ENST00000563683 FAM58BPP0C7Q3 252 aa10.6□□□□□ -0.71
RNF40-204ENST00000563683 TEX44Q53QW1 395 aa10.6□□□□□ -0.71
RNF40-204ENST00000563683 AGAP9Q5VTM2 703 aa10.6□□□□□ -0.71
RNF40-204ENST00000563683 PGM2L1Q6PCE3 622 aa10.6□□□□□ -0.71
RNF40-204ENST00000563683 SNX32Q86XE0 403 aa10.6□□□□□ -0.71
RNF40-204ENST00000563683 SHCBP1Q8NEM2 672 aa10.6□□□□□ -0.71
RNF40-204ENST00000563683 GAB3Q8WWW8 586 aa10.6□□□□□ -0.71
RNF40-204ENST00000563683 FBXO32Q969P5 355 aa10.6□□□□□ -0.71
RNF40-204ENST00000563683 TSPAN17Q96FV3 270 aa10.6□□□□□ -0.71
RNF40-204ENST00000563683 ZBED3Q96IU2 234 aaPredicted RBP10.6□□□□□ -0.71
RNF40-204ENST00000563683 EFCAB1Q9HAE3 211 aa10.6□□□□□ -0.71
RNF40-204ENST00000563683 MORF4L1Q9UBU8 362 aa10.6□□□□□ -0.71
RNF40-204ENST00000563683 TRHDEQ9UKU6 1024 aa10.6□□□□□ -0.71
RNF40-204ENST00000563683 WDR37Q9Y2I8 494 aa10.6□□□□□ -0.71
RNF40-204ENST00000563683 ADGRA2Q96PE1 1338 aa10.6□□□□□ -0.71
RNF40-204ENST00000563683 CAPN8A6NHC0 703 aa10.6□□□□□ -0.71
RNF40-204ENST00000563683 SPTLC1O15269 473 aa10.6□□□□□ -0.71
RNF40-204ENST00000563683 ZBTB24O43167 697 aaPredicted RBP10.6□□□□□ -0.71
RNF40-204ENST00000563683 IRF1P10914 325 aa10.6□□□□□ -0.71
RNF40-204ENST00000563683 L1CAMP32004 1257 aa10.6□□□□□ -0.71
RNF40-204ENST00000563683 MSX2P35548 267 aaPredicted RBP10.6□□□□□ -0.71
RNF40-204ENST00000563683 PPM1FP49593 454 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms