RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 LRRC61Q9BV99 259 aa7.92□□□□□ -1.14
HERPUD1-206ENST00000563343 KCTD10Q9H3F6 313 aa7.92□□□□□ -1.14
HERPUD1-206ENST00000563343 SYNDIG1Q9H7V2 258 aa7.92□□□□□ -1.14
HERPUD1-206ENST00000563343 LRRC4Q9HBW1 653 aa7.92□□□□□ -1.14
HERPUD1-206ENST00000563343 CNGB3Q9NQW8 809 aa7.92□□□□□ -1.14
HERPUD1-206ENST00000563343 ZNF71Q9NQZ8 489 aaPredicted RBP7.92□□□□□ -1.14
HERPUD1-206ENST00000563343 TSPAN16Q9UKR8 245 aa7.92□□□□□ -1.14
HERPUD1-206ENST00000563343 PADI4Q9UM07 663 aa7.92□□□□□ -1.14
HERPUD1-206ENST00000563343 CEP83Q9Y592 693 aa7.92□□□□□ -1.14
HERPUD1-206ENST00000563343 OR51B4Q9Y5P0 310 aa7.92□□□□□ -1.14
HERPUD1-206ENST00000563343 POLQO75417 2590 aa7.92□□□□□ -1.14
HERPUD1-206ENST00000563343 PDZD2O15018 2839 aa7.92□□□□□ -1.14
HERPUD1-206ENST00000563343 APCP25054 2843 aa7.92□□□□□ -1.14
HERPUD1-206ENST00000563343 ESPL1Q14674 2120 aa7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 TYW5A2RUC4 315 aaKnown RBP7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 TMX2-CTNND1H3BSU7 103 aa7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 YY2O15391 372 aa7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 PAK4O96013 591 aaPredicted RBP7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 CELA2BP08218 269 aaPredicted RBP7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 JMJD7P0C870 316 aa7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 PDGFRAP16234 1089 aa7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 ITGB7P26010 798 aa7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 CD82P27701 267 aa7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 CASP1P29466 404 aa7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 RABIFP47224 123 aa7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 RPIAP49247 311 aa7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 ADKP55263 362 aaKnown RBP7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 SULT2A1Q06520 285 aa7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 BST2Q10589 180 aaKnown RBP7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 C1orf61Q13536 156 aa7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 PDE1CQ14123 709 aaPredicted RBP7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 GOLGA7BQ2TAP0 167 aa7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 CAPRIN2Q6IMN6 1127 aaKnown RBP7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 TMPRSS9Q7Z410 1059 aa7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 LGI2Q8N0V4 545 aa7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 CCAR2Q8N163 923 aaKnown RBP7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 SDR16C5Q8N3Y7 309 aa7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 SH2D3CQ8N5H7 860 aa7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 ZNF454Q8N9F8 522 aa7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 DQX1Q8TE96 717 aaKnown RBP7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 BTN2A2Q8WVV5 523 aa7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 IRGQQ8WZA9 623 aa7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 GLMNQ92990 594 aa7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 NKD1Q969G9 470 aa7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 CCDC74AQ96AQ1 378 aa7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 FAXDC2Q96IV6 333 aa7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 TMX3Q96JJ7 454 aa7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 TMEM74Q96NL1 305 aa7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 LENG8Q96PV6 779 aaPredicted RBP7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 GFM1Q96RP9 751 aaKnown RBP7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 EPAS1Q99814 870 aa7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 PRMT1Q99873 361 aaKnown RBP7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 DDX50Q9BQ39 737 aaKnown RBP7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 SLC17A9Q9BYT1 436 aa7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 CPEB1Q9BZB8 566 aaKnown RBP7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 B3GNT4Q9C0J1 378 aa7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 STRADBQ9C0K7 418 aa7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 SLC39A2Q9NP94 309 aa7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 TMPRSS4Q9NRS4 437 aa7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 CISHQ9NSE2 258 aa7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 SPASTQ9UBP0 616 aa7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 APOBEC3BQ9UH17 382 aaKnown RBP7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 NAALADL1Q9UQQ1 740 aa7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 TLR6Q9Y2C9 796 aa7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 NF1P21359 2839 aa7.91□□□□□ -1.14
HERPUD1-206ENST00000563343 PRRC2CQ9Y520 2896 aaKnown RBP7.9□□□□□ -1.14
HERPUD1-206ENST00000563343 SETD2Q9BYW2 2564 aaPredicted RBP7.9□□□□□ -1.14
HERPUD1-206ENST00000563343 PCDH8O95206 1070 aa7.9□□□□□ -1.14
HERPUD1-206ENST00000563343 LTFP02788 710 aa7.9□□□□□ -1.14
HERPUD1-206ENST00000563343 RPLP0P05388 317 aaKnown RBP7.9□□□□□ -1.14
HERPUD1-206ENST00000563343 TRIM49P0CI25 452 aa7.9□□□□□ -1.14
HERPUD1-206ENST00000563343 TRIM49CP0CI26 452 aa7.9□□□□□ -1.14
HERPUD1-206ENST00000563343 TSHRP16473 764 aa7.9□□□□□ -1.14
HERPUD1-206ENST00000563343 TACR2P21452 398 aa7.9□□□□□ -1.14
HERPUD1-206ENST00000563343 GCLMP48507 274 aa7.9□□□□□ -1.14
HERPUD1-206ENST00000563343 OXCT1P55809 520 aa7.9□□□□□ -1.14
HERPUD1-206ENST00000563343 MCCD1P59942 119 aaPredicted RBP7.9□□□□□ -1.14
HERPUD1-206ENST00000563343 NNTQ13423 1086 aa7.9□□□□□ -1.14
HERPUD1-206ENST00000563343 EIF4EBP2Q13542 120 aaPredicted RBP7.9□□□□□ -1.14
HERPUD1-206ENST00000563343 PRRT3Q5FWE3 981 aa7.9□□□□□ -1.14
HERPUD1-206ENST00000563343 RAP1GAP2Q684P5 730 aa7.9□□□□□ -1.14
HERPUD1-206ENST00000563343 FAM173BQ6P4H8 233 aa7.9□□□□□ -1.14
HERPUD1-206ENST00000563343 ERN2Q76MJ5 926 aaKnown RBP7.9□□□□□ -1.14
HERPUD1-206ENST00000563343 CIR1Q86X95 450 aaPredicted RBP7.9□□□□□ -1.14
HERPUD1-206ENST00000563343 SLITRK4Q8IW52 837 aa7.9□□□□□ -1.14
HERPUD1-206ENST00000563343 PHACTR4Q8IZ21 702 aa7.9□□□□□ -1.14
HERPUD1-206ENST00000563343 SIX6OS1Q8N1H7 587 aa7.9□□□□□ -1.14
HERPUD1-206ENST00000563343 KYQ8NBH2 561 aa7.9□□□□□ -1.14
HERPUD1-206ENST00000563343 CHST14Q8NCH0 376 aa7.9□□□□□ -1.14
HERPUD1-206ENST00000563343 KIAA0895Q8NCT3 520 aa7.9□□□□□ -1.14
HERPUD1-206ENST00000563343 TMIEQ8NEW7 156 aa7.9□□□□□ -1.14
HERPUD1-206ENST00000563343 OR2A12Q8NGT7 310 aa7.9□□□□□ -1.14
HERPUD1-206ENST00000563343 C9orf43Q8TAL5 461 aaPredicted RBP7.9□□□□□ -1.14
HERPUD1-206ENST00000563343 GOLGA5Q8TBA6 731 aa7.9□□□□□ -1.14
HERPUD1-206ENST00000563343 UBA3Q8TBC4 463 aa7.9□□□□□ -1.14
HERPUD1-206ENST00000563343 CLEC4CQ8WTT0 213 aa7.9□□□□□ -1.14
HERPUD1-206ENST00000563343 SSC4DQ8WTU2 575 aa7.9□□□□□ -1.14
HERPUD1-206ENST00000563343 SLC35F5Q8WV83 523 aa7.9□□□□□ -1.14
HERPUD1-206ENST00000563343 JPH3Q8WXH2 748 aaPredicted RBP7.9□□□□□ -1.14
HERPUD1-206ENST00000563343 SEMA4DQ92854 862 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms