RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 NOS2P35228 1153 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 NAB1Q13506 487 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 KLHL17Q6TDP4 642 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 RPTNQ6XPR3 784 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 OTOP1Q7RTM1 612 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 ZC3H7AQ8IWR0 971 aaKnown RBP11.39□□□□□ -0.59
RPAP1-204ENST00000562303 DCLRE1BQ9H816 532 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 H7C0S8 307 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 WWP2O00308 870 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 TRDMT1O14717 391 aaKnown RBP11.39□□□□□ -0.59
RPAP1-204ENST00000562303 FKTNO75072 461 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 MED26O95402 600 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 CSH1P0DML2 217 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 CSH2P0DML3 217 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 PTPRAP18433 802 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 RBL1P28749 1068 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 TOB1P50616 345 aaPredicted RBP11.39□□□□□ -0.59
RPAP1-204ENST00000562303 VGLL4Q14135 290 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 PARP6Q2NL67 630 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 USP41Q3LFD5 358 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 STXBP5Q5T5C0 1151 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 INTS11Q5TA45 600 aaKnown RBP11.39□□□□□ -0.59
RPAP1-204ENST00000562303 MCCC1Q96RQ3 725 aaPredicted RBP11.39□□□□□ -0.59
RPAP1-204ENST00000562303 PRRG4Q9BZD6 226 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 ALG9Q9H6U8 611 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 TRPM1Q7Z4N2 1603 aa11.39□□□□□ -0.59
RPAP1-204ENST00000562303 PHGDHO43175 533 aaKnown RBP11.38□□□□□ -0.59
RPAP1-204ENST00000562303 BUD23O43709 281 aaKnown RBP11.38□□□□□ -0.59
RPAP1-204ENST00000562303 GCATO75600 419 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 SMIM10L2AP0DMW4 78 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 SMIM10L2BP0DMW5 78 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 MSLNQ13421 630 aaPredicted RBP11.38□□□□□ -0.59
RPAP1-204ENST00000562303 CNGA2Q16280 664 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 PFKFB4Q16877 469 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 FAM171BQ6P995 826 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 ARMC8Q8IUR7 673 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 ENKURQ8TC29 256 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 RABGEF1Q9UJ41 708 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 SLC12A4Q9UP95 1085 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 CHKBQ9Y259 395 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 RIPK2O43353 540 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 PECAM1P16284 738 aaPredicted RBP11.38□□□□□ -0.59
RPAP1-204ENST00000562303 PTENP60484 403 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 SRSF11Q05519 484 aaKnown RBP11.38□□□□□ -0.59
RPAP1-204ENST00000562303 DEFB115Q30KQ5 88 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 SNAP47Q5SQN1 464 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 NEPROQ6NW34 567 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 KIAA0408Q6ZU52 694 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 ADGRA1Q86SQ6 560 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 RNF148Q8N7C7 305 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 SLC4A5Q9BY07 1137 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 TMEM216Q9P0N5 145 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 COPG2Q9UBF2 871 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 C15orf38-AP3S2A0A0A6YYH1 394 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 EFCAB10A6NFE3 127 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 PTGES3LE9PB15 166 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 GJB6O95452 261 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 SCTRP47872 440 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 ACAP1Q15027 740 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 TRMT5Q32P41 509 aaKnown RBP11.38□□□□□ -0.59
RPAP1-204ENST00000562303 PCID2Q5JVF3 399 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 ARPINQ7Z6K5 226 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 NKAPQ8N5F7 415 aaKnown RBP11.38□□□□□ -0.59
RPAP1-204ENST00000562303 STAG3L4Q8TBR4 150 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 HNRNPLLQ8WVV9 542 aaKnown RBP11.38□□□□□ -0.59
RPAP1-204ENST00000562303 TEKT5Q96M29 485 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 CEP44Q9C0F1 390 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 CLTCL1P53675 1640 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 TRUB2O95900 331 aaKnown RBP11.38□□□□□ -0.59
RPAP1-204ENST00000562303 BCL10O95999 233 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 FTH1P02794 183 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 MYBL2P10244 700 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 EIF4BP23588 611 aaKnown RBP11.38□□□□□ -0.59
RPAP1-204ENST00000562303 CELF3Q5SZQ8 465 aaKnown RBP11.38□□□□□ -0.59
RPAP1-204ENST00000562303 KRT74Q7RTS7 529 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 NMD3Q96D46 503 aaKnown RBP11.38□□□□□ -0.59
RPAP1-204ENST00000562303 FTHL17Q9BXU8 183 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 SEMA4AQ9H3S1 761 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.38□□□□□ -0.59
RPAP1-204ENST00000562303 MAT2BQ9NZL9 334 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 ARHGAP20Q9P2F6 1191 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 SUCOQ9UBS9 1254 aaKnown RBP11.38□□□□□ -0.59
RPAP1-204ENST00000562303 FRG1Q14331 258 aaKnown RBP11.38□□□□□ -0.59
RPAP1-204ENST00000562303 NEDD8Q15843 81 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 PAGE2Q7Z2X7 111 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 SNX32Q86XE0 403 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 OXNAD1Q96HP4 312 aaPredicted RBP11.38□□□□□ -0.59
RPAP1-204ENST00000562303 CD248Q9HCU0 757 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 SLC27A5Q9Y2P5 690 aa11.38□□□□□ -0.59
RPAP1-204ENST00000562303 CDK7P50613 346 aa11.37□□□□□ -0.59
RPAP1-204ENST00000562303 PEX6Q13608 980 aa11.37□□□□□ -0.59
RPAP1-204ENST00000562303 ZCCHC23Q6ZST2 131 aa11.37□□□□□ -0.59
RPAP1-204ENST00000562303 EIF3MQ7L2H7 374 aaKnown RBP11.37□□□□□ -0.59
RPAP1-204ENST00000562303 HJURPQ8NCD3 748 aaPredicted RBP11.37□□□□□ -0.59
RPAP1-204ENST00000562303 GDPD5Q8WTR4 605 aa11.37□□□□□ -0.59
RPAP1-204ENST00000562303 SLC25A23Q9BV35 468 aa11.37□□□□□ -0.59
RPAP1-204ENST00000562303 CDH9Q9ULB4 789 aa11.37□□□□□ -0.59
RPAP1-204ENST00000562303 DNTTP04053 509 aa11.37□□□□□ -0.59
RPAP1-204ENST00000562303 PRG2P13727 222 aa11.37□□□□□ -0.59
RPAP1-204ENST00000562303 NPR3P17342 541 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms