RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 ALFQ53S48 1182 aa10.42□□□□□ -0.74
TUBGCP4-202ENST00000561691 SNX30Q5VWJ9 437 aa10.42□□□□□ -0.74
TUBGCP4-202ENST00000561691 NADSYN1Q6IA69 706 aa10.42□□□□□ -0.74
TUBGCP4-202ENST00000561691 RWDD4Q6NW29 188 aaKnown RBP10.42□□□□□ -0.74
TUBGCP4-202ENST00000561691 UMODL1-AS1Q8N2C9 162 aa10.42□□□□□ -0.74
TUBGCP4-202ENST00000561691 GSDMBQ8TAX9 411 aa10.42□□□□□ -0.74
TUBGCP4-202ENST00000561691 GIPC2Q8TF65 315 aa10.42□□□□□ -0.74
TUBGCP4-202ENST00000561691 LZICQ8WZA0 190 aa10.42□□□□□ -0.74
TUBGCP4-202ENST00000561691 IGSF8Q969P0 613 aa10.42□□□□□ -0.74
TUBGCP4-202ENST00000561691 FCRL3Q96P31 734 aaPredicted RBP10.42□□□□□ -0.74
TUBGCP4-202ENST00000561691 VAT1Q99536 393 aa10.42□□□□□ -0.74
TUBGCP4-202ENST00000561691 IQCGQ9H095 443 aaKnown RBP10.42□□□□□ -0.74
TUBGCP4-202ENST00000561691 VCX3BQ9H321 246 aa10.42□□□□□ -0.74
TUBGCP4-202ENST00000561691 CCSER2Q9H7U1 834 aa10.42□□□□□ -0.74
TUBGCP4-202ENST00000561691 VCX3AQ9NNX9 186 aa10.42□□□□□ -0.74
TUBGCP4-202ENST00000561691 KCNK9Q9NPC2 374 aa10.42□□□□□ -0.74
TUBGCP4-202ENST00000561691 SYBUQ9NX95 663 aa10.42□□□□□ -0.74
TUBGCP4-202ENST00000561691 KLHL8Q9P2G9 620 aaPredicted RBP10.42□□□□□ -0.74
TUBGCP4-202ENST00000561691 GGT7Q9UJ14 662 aa10.42□□□□□ -0.74
TUBGCP4-202ENST00000561691 ATP11BQ9Y2G3 1177 aa10.42□□□□□ -0.74
TUBGCP4-202ENST00000561691 LRCH1Q9Y2L9 728 aa10.42□□□□□ -0.74
TUBGCP4-202ENST00000561691 MYO18AQ92614 2054 aaKnown RBP10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 MTSS1O43312 755 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 USP12O75317 370 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 CLTBP09497 229 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 LINC00271P0C7V0 271 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 TAC1P20366 129 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 OR1D2P34982 312 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 RFC2P35250 354 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 GJA8P48165 433 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 PTDSS1P48651 473 aaKnown RBP10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 NEK3P51956 506 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 IHHQ14623 411 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 PSMD5Q16401 504 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 OTOP3Q7RTS5 596 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 SLC26A11Q86WA9 606 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 LZTR1Q8N653 840 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 FITM2Q8N6M3 262 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 ANKLE1Q8NAG6 615 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 OR52K1Q8NGK4 314 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 AGAP3Q96P47 875 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 LRMDAQ9H2I8 198 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 C12orf65Q9H3J6 166 aaKnown RBP10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 TMEM39AQ9NV64 488 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 SLC17A6Q9P2U8 582 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 PPARGC1AQ9UBK2 798 aaKnown RBP10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 SMG5Q9UPR3 1016 aaKnown RBP10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 ARL2BPQ9Y2Y0 163 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 SDR42E2A6NKP2 422 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 MATN3O15232 486 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 RFPL1O75677 317 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 UNC5CO95185 931 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 SOD2P04179 222 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 DHRS4L1P0CG22 281 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 RHOQP17081 205 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 KRT15P19012 456 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 KRT4P19013 534 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 ETV4P43268 484 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 ALDH7A1P49419 539 aaKnown RBP10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 SESN2P58004 480 aaPredicted RBP10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 RPL10AP62906 217 aaKnown RBP10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 DSG1Q02413 1049 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 RING1Q06587 406 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 LSAMPQ13449 338 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 C5orf22Q49AR2 442 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 WASHC2DQ5SRD0 308 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 DENND5AQ6IQ26 1287 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 FBXL22Q6P050 247 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 RGS9BPQ6ZS82 235 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 LONP2Q86WA8 852 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 GDAP1Q8TB36 358 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 FATE1Q969F0 183 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 CEP295NLQ96MC4 621 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 KLF6Q99612 283 aaPredicted RBP10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 RMI1Q9H9A7 625 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 TLR8Q9NR97 1041 aaKnown RBP10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 TMEM248Q9NWD8 314 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 MARCH2Q9P0N8 246 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 FNIP2Q9P278 1114 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 AFF4Q9UHB7 1163 aaKnown RBP10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 CIDEBQ9UHD4 219 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 VANGL2Q9ULK5 521 aa10.41□□□□□ -0.74
TUBGCP4-202ENST00000561691 PTPRSQ13332 1948 aa10.4□□□□□ -0.74
TUBGCP4-202ENST00000561691 DOCK4Q8N1I0 1966 aa10.4□□□□□ -0.74
TUBGCP4-202ENST00000561691 ZCWPW2A0A1B0GU75 182 aa10.4□□□□□ -0.74
TUBGCP4-202ENST00000561691 ABHD14A-ACY1A0A1B0GW23 586 aa10.4□□□□□ -0.74
TUBGCP4-202ENST00000561691 TMEM221A6NGB7 291 aa10.4□□□□□ -0.74
TUBGCP4-202ENST00000561691 DFFAO00273 331 aa10.4□□□□□ -0.74
TUBGCP4-202ENST00000561691 KIAA0355O15063 1070 aa10.4□□□□□ -0.74
TUBGCP4-202ENST00000561691 CCDC166P0CW27 439 aa10.4□□□□□ -0.74
TUBGCP4-202ENST00000561691 SLC2A3P11169 496 aa10.4□□□□□ -0.74
TUBGCP4-202ENST00000561691 CSF2RAP15509 400 aa10.4□□□□□ -0.74
TUBGCP4-202ENST00000561691 PGAM1P18669 254 aa10.4□□□□□ -0.74
TUBGCP4-202ENST00000561691 ADRA1AP35348 466 aa10.4□□□□□ -0.74
TUBGCP4-202ENST00000561691 CCNFP41002 786 aa10.4□□□□□ -0.74
TUBGCP4-202ENST00000561691 KCNQ1P51787 676 aa10.4□□□□□ -0.74
TUBGCP4-202ENST00000561691 WDR5P61964 334 aaKnown RBP10.4□□□□□ -0.74
TUBGCP4-202ENST00000561691 TNK2Q07912 1038 aa10.4□□□□□ -0.74
TUBGCP4-202ENST00000561691 FRG1Q14331 258 aaKnown RBP10.4□□□□□ -0.74
TUBGCP4-202ENST00000561691 CNPY1Q3B7I2 92 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms