RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 ZNF574Q6ZN55 896 aaPredicted RBP6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 RGS9BPQ6ZS82 235 aa6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 ADGRG6Q86SQ4 1221 aa6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 FAM35AQ86V20 835 aa6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 SIAH1Q8IUQ4 282 aa6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 SFRP1Q8N474 314 aa6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 NCOA7Q8NI08 942 aa6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 NPLOC4Q8TAT6 608 aa6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 SPATA18Q8TC71 538 aa6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 GIPC3Q8TF64 312 aa6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 PERPQ96FX8 193 aa6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 COX4I2Q96KJ9 171 aa6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 NSMCE3Q96MG7 304 aa6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 BTBD10Q9BSF8 475 aa6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 ROPN1BQ9BZX4 212 aaPredicted RBP6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 ROPN1Q9HAT0 212 aaPredicted RBP6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 PARVBQ9HBI1 364 aa6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 DNAJB4Q9UDY4 337 aa6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 ANAPC5Q9UJX4 755 aa6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 RPTORQ8N122 1335 aa6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 SLC12A8A0AV02 714 aa6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 FUOMA2VDF0 154 aa6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 J3QL48 77 aa6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 SNAP23O00161 211 aa6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 GSC2O15499 205 aa6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 TRMUO75648 421 aaKnown RBP6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 RARGP13631 454 aa6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 KLRC1P26715 233 aa6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 STX2P32856 288 aa6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 MCAMP43121 646 aa6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 RBP5P82980 135 aa6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 ZBTB17Q13105 803 aa6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 MED21Q13503 144 aa6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 TTI2Q6NXR4 508 aa6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 CABP7Q86V35 215 aa6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 TSPYL5Q86VY4 417 aaPredicted RBP6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 CYB5D2Q8WUJ1 264 aa6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 PRPF31Q8WWY3 499 aaKnown RBP6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 WASF1Q92558 559 aa6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 NSUN4Q96CB9 384 aaKnown RBP6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 RNPEPQ9H4A4 650 aa6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 EBF3Q9H4W6 596 aa6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 PSTPIP2Q9H939 334 aa6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 PLGRKTQ9HBL7 147 aa6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 CLCA2Q9UQC9 943 aa6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 NPFFR2Q9Y5X5 522 aa6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 ATRNO75882 1429 aa6.88□□□□□ -1.31
TSPAN3-209ENST00000560715 IRS2Q9Y4H2 1338 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 LRRC53A6NM62 1247 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 EXOC3O60645 756 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 BCAS2O75934 225 aaPredicted RBP6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 SMIM18P0DKX4 95 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 TIMP2P16035 220 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 TMEM11P17152 192 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 HOXD10P28358 340 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 ATP5DP30049 168 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 AKT1P31749 480 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 GARSP41250 739 aaKnown RBP6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 FAM189BP81408 668 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 GBE1Q04446 702 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 YWHAHQ04917 246 aaPredicted RBP6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 SCARF1Q14162 830 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 TAF1BQ53T94 588 aaPredicted RBP6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 IL23RQ5VWK5 629 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 DUPD1Q68J44 220 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 SYT13Q7L8C5 426 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 KRT27Q7Z3Y8 459 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 RALYLQ86SE5 291 aaKnown RBP6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 RASGEF1CQ8N431 466 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 FRMD1Q8N878 549 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 SPPL3Q8TCT6 385 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 PYROXD1Q8WU10 500 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 ANKRD36BP1Q96IX9 119 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 ACAP3Q96P50 834 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 CRAMP1Q96RY5 1269 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 HTATIP2Q9BUP3 242 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 NRSN2Q9GZP1 204 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 SMG9Q9H0W8 520 aaKnown RBP6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 CHODLQ9H9P2 273 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 DAPP1Q9UN19 280 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 PCDHB2Q9Y5E7 798 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 POMT1Q9Y6A1 747 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 A0A1B0GUL6 1792 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 SCN7AQ01118 1682 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 NHSQ6T4R5 1651 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 C2orf71A6NGG8 1288 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 FAM47E-STBD1D6RA91 191 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 GTPBP1O00178 669 aaKnown RBP6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 PSMA7O14818 248 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 EPHB6O15197 1021 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 MAGEB2O15479 319 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 CYTH3O43739 400 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 SGTAO43765 313 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 ACTL6BO94805 426 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 ZWINTO95229 277 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 NTSR2O95665 410 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 MAPTP10636 758 aaKnown RBP6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 ANPEPP15144 967 aa6.87□□□□□ -1.31
TSPAN3-209ENST00000560715 PTPN2P17706 415 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms