RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 SCAMP1O15126 338 aa10.74□□□□□ -0.69
CDC42BPB-207ENST00000560492 ARHGAP6O43182 974 aa10.74□□□□□ -0.69
CDC42BPB-207ENST00000560492 DXOO77932 396 aaKnown RBP10.74□□□□□ -0.69
CDC42BPB-207ENST00000560492 SMC2O95347 1197 aa10.74□□□□□ -0.69
CDC42BPB-207ENST00000560492 ADCY5O95622 1261 aa10.74□□□□□ -0.69
CDC42BPB-207ENST00000560492 PRNPP04156 253 aa10.74□□□□□ -0.69
CDC42BPB-207ENST00000560492 SRCP12931 536 aa10.74□□□□□ -0.69
CDC42BPB-207ENST00000560492 RRM1P23921 792 aa10.74□□□□□ -0.69
CDC42BPB-207ENST00000560492 GNA15P30679 374 aa10.74□□□□□ -0.69
CDC42BPB-207ENST00000560492 GPD2P43304 727 aa10.74□□□□□ -0.69
CDC42BPB-207ENST00000560492 IRAK1P51617 712 aa10.74□□□□□ -0.69
CDC42BPB-207ENST00000560492 PLK1P53350 603 aa10.74□□□□□ -0.69
CDC42BPB-207ENST00000560492 AUHQ13825 339 aaKnown RBP10.74□□□□□ -0.69
CDC42BPB-207ENST00000560492 ISXQ2M1V0 245 aa10.74□□□□□ -0.69
CDC42BPB-207ENST00000560492 ZNF284Q2VY69 593 aa10.74□□□□□ -0.69
CDC42BPB-207ENST00000560492 DEFB133Q30KQ1 61 aa10.74□□□□□ -0.69
CDC42BPB-207ENST00000560492 C6orf132Q5T0Z8 1188 aa10.74□□□□□ -0.69
CDC42BPB-207ENST00000560492 CDCP2Q5VXM1 449 aa10.74□□□□□ -0.69
CDC42BPB-207ENST00000560492 SEL1L3Q68CR1 1132 aa10.74□□□□□ -0.69
CDC42BPB-207ENST00000560492 ISM2Q6H9L7 571 aa10.74□□□□□ -0.69
CDC42BPB-207ENST00000560492 KLHL10Q6JEL2 608 aa10.74□□□□□ -0.69
CDC42BPB-207ENST00000560492 ZCCHC8Q6NZY4 707 aaKnown RBP10.74□□□□□ -0.69
CDC42BPB-207ENST00000560492 NEK5Q6P3R8 708 aa10.74□□□□□ -0.69
CDC42BPB-207ENST00000560492 GUSBP11Q6P575 273 aa10.74□□□□□ -0.69
CDC42BPB-207ENST00000560492 GCNT7Q6ZNI0 430 aa10.74□□□□□ -0.69
CDC42BPB-207ENST00000560492 RBM44Q6ZP01 1051 aaKnown RBP10.74□□□□□ -0.69
CDC42BPB-207ENST00000560492 ERN2Q76MJ5 926 aaKnown RBP10.74□□□□□ -0.69
CDC42BPB-207ENST00000560492 DEFB106AQ8N104 65 aa10.74□□□□□ -0.69
CDC42BPB-207ENST00000560492 LMX1AQ8TE12 382 aa10.74□□□□□ -0.69
CDC42BPB-207ENST00000560492 SMARCE1Q969G3 411 aa10.74□□□□□ -0.69
CDC42BPB-207ENST00000560492 IL12RB2Q99665 862 aa10.74□□□□□ -0.69
CDC42BPB-207ENST00000560492 PRMT1Q99873 361 aaKnown RBP10.74□□□□□ -0.69
CDC42BPB-207ENST00000560492 C2orf49Q9BVC5 232 aaPredicted RBP10.74□□□□□ -0.69
CDC42BPB-207ENST00000560492 SCAND2PQ9GZW5 306 aaPredicted RBP10.74□□□□□ -0.69
CDC42BPB-207ENST00000560492 TNKS2Q9H2K2 1166 aa10.74□□□□□ -0.69
CDC42BPB-207ENST00000560492 USP29Q9HBJ7 922 aa10.74□□□□□ -0.69
CDC42BPB-207ENST00000560492 ASCL3Q9NQ33 180 aa10.74□□□□□ -0.69
CDC42BPB-207ENST00000560492 IL36AQ9UHA7 158 aa10.74□□□□□ -0.69
CDC42BPB-207ENST00000560492 FAM237AA0A1B0GTK4 181 aa10.73□□□□□ -0.69
CDC42BPB-207ENST00000560492 C10orf142B7Z368 130 aa10.73□□□□□ -0.69
CDC42BPB-207ENST00000560492 K7ERQ8 282 aa10.73□□□□□ -0.69
CDC42BPB-207ENST00000560492 NEMP1O14524 444 aa10.73□□□□□ -0.69
CDC42BPB-207ENST00000560492 MUSKO15146 869 aa10.73□□□□□ -0.69
CDC42BPB-207ENST00000560492 AQP9O43315 295 aa10.73□□□□□ -0.69
CDC42BPB-207ENST00000560492 SNAP91O60641 907 aa10.73□□□□□ -0.69
CDC42BPB-207ENST00000560492 CLDN11O75508 207 aa10.73□□□□□ -0.69
CDC42BPB-207ENST00000560492 CTSLP07711 333 aa10.73□□□□□ -0.69
CDC42BPB-207ENST00000560492 TGM2P21980 687 aa10.73□□□□□ -0.69
CDC42BPB-207ENST00000560492 MCCD1P59942 119 aaPredicted RBP10.73□□□□□ -0.69
CDC42BPB-207ENST00000560492 NFATC3Q12968 1075 aa10.73□□□□□ -0.69
CDC42BPB-207ENST00000560492 SGCGQ13326 291 aa10.73□□□□□ -0.69
CDC42BPB-207ENST00000560492 NR0B2Q15466 257 aa10.73□□□□□ -0.69
CDC42BPB-207ENST00000560492 TAF5Q15542 800 aa10.73□□□□□ -0.69
CDC42BPB-207ENST00000560492 LINGO4Q6UY18 593 aa10.73□□□□□ -0.69
CDC42BPB-207ENST00000560492 BEND5Q7L4P6 421 aa10.73□□□□□ -0.69
CDC42BPB-207ENST00000560492 PARGQ86W56 976 aa10.73□□□□□ -0.69
CDC42BPB-207ENST00000560492 JAMLQ86YT9 394 aa10.73□□□□□ -0.69
CDC42BPB-207ENST00000560492 DCP2Q8IU60 420 aaKnown RBP10.73□□□□□ -0.69
CDC42BPB-207ENST00000560492 PASD1Q8IV76 773 aa10.73□□□□□ -0.69
CDC42BPB-207ENST00000560492 SLC22A18ASQ8N1D0 253 aa10.73□□□□□ -0.69
CDC42BPB-207ENST00000560492 RYBPQ8N488 228 aaPredicted RBP10.73□□□□□ -0.69
CDC42BPB-207ENST00000560492 ARL14Q8N4G2 192 aa10.73□□□□□ -0.69
CDC42BPB-207ENST00000560492 CHST14Q8NCH0 376 aa10.73□□□□□ -0.69
CDC42BPB-207ENST00000560492 ZNF548Q8NEK5 533 aaPredicted RBP10.73□□□□□ -0.69
CDC42BPB-207ENST00000560492 OR52K2Q8NGK3 314 aa10.73□□□□□ -0.69
CDC42BPB-207ENST00000560492 GLMNQ92990 594 aa10.73□□□□□ -0.69
CDC42BPB-207ENST00000560492 ZDHHC16Q969W1 377 aa10.73□□□□□ -0.69
CDC42BPB-207ENST00000560492 FAM131CQ96AQ9 280 aa10.73□□□□□ -0.69
CDC42BPB-207ENST00000560492 MED8Q96G25 268 aa10.73□□□□□ -0.69
CDC42BPB-207ENST00000560492 ARHGAP9Q9BRR9 750 aa10.73□□□□□ -0.69
CDC42BPB-207ENST00000560492 TRIM4Q9C037 500 aa10.73□□□□□ -0.69
CDC42BPB-207ENST00000560492 SYNCQ9H7C4 482 aa10.73□□□□□ -0.69
CDC42BPB-207ENST00000560492 GDPD2Q9HCC8 539 aa10.73□□□□□ -0.69
CDC42BPB-207ENST00000560492 UBE2TQ9NPD8 197 aaPredicted RBP10.73□□□□□ -0.69
CDC42BPB-207ENST00000560492 NCKIPSDQ9NZQ3 722 aa10.73□□□□□ -0.69
CDC42BPB-207ENST00000560492 ZFR2Q9UPR6 939 aaKnown RBP10.73□□□□□ -0.69
CDC42BPB-207ENST00000560492 ATP6V1DQ9Y5K8 247 aa10.73□□□□□ -0.69
CDC42BPB-207ENST00000560492 MYO18BQ8IUG5 2567 aa10.73□□□□□ -0.69
CDC42BPB-207ENST00000560492 RP1P56715 2156 aa10.73□□□□□ -0.69
CDC42BPB-207ENST00000560492 A0A1W2PQ27 194 aa10.72□□□□□ -0.69
CDC42BPB-207ENST00000560492 A0A1W2PQ64 194 aa10.72□□□□□ -0.69
CDC42BPB-207ENST00000560492 POM121BA6NF01 834 aa10.72□□□□□ -0.69
CDC42BPB-207ENST00000560492 M0QYT0 321 aa10.72□□□□□ -0.69
CDC42BPB-207ENST00000560492 FPGTO14772 594 aa10.72□□□□□ -0.69
CDC42BPB-207ENST00000560492 TNFSF15O95150 251 aa10.72□□□□□ -0.69
CDC42BPB-207ENST00000560492 WISP1O95388 367 aa10.72□□□□□ -0.69
CDC42BPB-207ENST00000560492 PAK4O96013 591 aaPredicted RBP10.72□□□□□ -0.69
CDC42BPB-207ENST00000560492 MT-CO1P00395 513 aa10.72□□□□□ -0.69
CDC42BPB-207ENST00000560492 IGLV3-25P01717 112 aa10.72□□□□□ -0.69
CDC42BPB-207ENST00000560492 JUNDP17535 347 aa10.72□□□□□ -0.69
CDC42BPB-207ENST00000560492 RPIAP49247 311 aa10.72□□□□□ -0.69
CDC42BPB-207ENST00000560492 NEK3P51956 506 aa10.72□□□□□ -0.69
CDC42BPB-207ENST00000560492 CDH4P55283 916 aa10.72□□□□□ -0.69
CDC42BPB-207ENST00000560492 RPS21P63220 83 aaKnown RBP10.72□□□□□ -0.69
CDC42BPB-207ENST00000560492 GCNT1Q02742 428 aa10.72□□□□□ -0.69
CDC42BPB-207ENST00000560492 PDCLQ13371 301 aa10.72□□□□□ -0.69
CDC42BPB-207ENST00000560492 PDE1CQ14123 709 aaPredicted RBP10.72□□□□□ -0.69
CDC42BPB-207ENST00000560492 DRAP1Q14919 205 aaPredicted RBP10.72□□□□□ -0.69
CDC42BPB-207ENST00000560492 EFHC1Q5JVL4 640 aa10.72□□□□□ -0.69
CDC42BPB-207ENST00000560492 C22orf39Q6P5X5 142 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms