RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 WFDC5Q8TCV5 224 aa11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 SLC44A1Q8WWI5 657 aa11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 AZIN2Q96A70 460 aa11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 ZNF669Q96BR6 464 aaPredicted RBP11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 PLD4Q96BZ4 506 aa11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 MRGPRX2Q96LB1 330 aa11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 DHRS4Q9BTZ2 278 aa11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 FSD1LQ9BXM9 530 aa11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 LRRC3Q9BY71 257 aa11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 CASS4Q9NQ75 786 aa11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 BFARQ9NZS9 450 aa11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 UXTQ9UBK9 157 aaPredicted RBP11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 SLC24A2Q9UI40 661 aa11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 OBSL1O75147 1896 aa11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 E2F8A0AVK6 867 aa11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 TBL1XO60907 577 aa11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 SUN1O94901 812 aa11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 TOP3BO95985 862 aaKnown RBP11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 PRKCGP05129 697 aa11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 MLNP12872 115 aa11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 NMBRP28336 390 aa11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 GNA12Q03113 381 aa11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 PPM1LQ5SGD2 360 aa11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 TDRPQ86YL5 185 aa11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 SP7Q8TDD2 431 aaPredicted RBP11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 MZB1Q8WU39 189 aa11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 DYDC1Q8WWB3 177 aa11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 LRRC39Q96DD0 335 aa11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 CEP295NLQ96MC4 621 aa11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 FCRL5Q96RD9 977 aa11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 AGAP2Q99490 1192 aa11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 TBL1YQ9BQ87 522 aa11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 EMILIN2Q9BXX0 1053 aa11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 SLC46A2Q9BY10 475 aa11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 MAN1C1Q9NR34 630 aa11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 CLEC4EQ9ULY5 219 aa11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 TRIM49D1C9J1S8 452 aa11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 GREM1O60565 184 aa11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 SNAP91O60641 907 aa11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 C1RP00736 705 aa11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 PRKCHP24723 683 aa11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 MZF1P28698 734 aaPredicted RBP11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 RENBPP51606 427 aa11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 PGGT1BP53609 377 aa11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 HNRNPDQ14103 355 aaKnown RBP11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 LBRQ14739 615 aaKnown RBP11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 CBX2Q14781 532 aaPredicted RBP11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 SHHQ15465 462 aa11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 QPCTQ16769 361 aa11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 SPNS2Q8IVW8 549 aa11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 BBS7Q8IWZ6 715 aa11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 RIN3Q8TB24 985 aa11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 MRPS31Q92665 395 aaKnown RBP11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 SMC6Q96SB8 1091 aa11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 MUC3BQ9H195 1237 aa11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 CNOT10Q9H9A5 744 aaKnown RBP11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 LRRC40Q9H9A6 602 aa11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 MOCS1Q9NZB8 636 aa11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 CFAP97Q9P2B7 532 aa11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 AAR2Q9Y312 384 aaKnown RBP11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 HCFC2Q9Y5Z7 792 aa11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 MYLKQ15746 1914 aa11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 HMX2A2RU54 273 aa11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 WDR91A4D1P6 747 aa11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 H0Y626 953 aa11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 RHOCP08134 193 aa11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 MMP2P08253 660 aa11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 PYGBP11216 843 aa11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 PGAM1P18669 254 aa11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 CA4P22748 312 aa11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 HOXD9P28356 352 aaPredicted RBP11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 RGRP47804 291 aa11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 CDH4P55283 916 aa11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 ZNF33AQ06730 810 aa11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 CDH17Q12864 832 aa11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 ZNF177Q13360 481 aaPredicted RBP11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 SLC5A9Q2M3M2 681 aa11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 ANO4Q32M45 955 aa11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 RABGAP1LQ5R372 815 aa11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 RNF219Q5W0B1 726 aaPredicted RBP11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 DENND5AQ6IQ26 1287 aa11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 SLC26A11Q86WA9 606 aa11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 TNS4Q8IZW8 715 aa11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 RIBC1Q8N443 379 aaPredicted RBP11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 NSMCE3Q96MG7 304 aa11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 ATP13A1Q9HD20 1204 aa11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 ASAH2Q9NR71 780 aa11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 SLC2A6Q9UGQ3 507 aa11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 GRID1Q9ULK0 1009 aa11.05□□□□□ -0.64
SNRPA1-211ENST00000560433 FAM159BA6NKW6 160 aa11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 CCL22O00626 93 aa11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 NDUFAB1O14561 156 aa11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 CACNG3O60359 315 aa11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 POLBP06746 335 aa11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 PIRTP0C851 137 aa11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 BMP1P13497 986 aa11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 CCT5P48643 541 aa11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 WNT3AP56704 352 aa11.04□□□□□ -0.64
SNRPA1-211ENST00000560433 SEPT6Q14141 434 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms