RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 USP53Q70EK8 1073 aa17■□□□□ 0.31
HERC1-207ENST00000560316 ERN2Q76MJ5 926 aaKnown RBP17■□□□□ 0.31
HERC1-207ENST00000560316 BEND5Q7L4P6 421 aa17■□□□□ 0.31
HERC1-207ENST00000560316 PARGQ86W56 976 aa17■□□□□ 0.31
HERC1-207ENST00000560316 CHST14Q8NCH0 376 aa17■□□□□ 0.31
HERC1-207ENST00000560316 TMIEQ8NEW7 156 aa17■□□□□ 0.31
HERC1-207ENST00000560316 GRIN3AQ8TCU5 1115 aa17■□□□□ 0.31
HERC1-207ENST00000560316 PPP1R9BQ96SB3 815 aa17■□□□□ 0.31
HERC1-207ENST00000560316 SLC17A9Q9BYT1 436 aa17■□□□□ 0.31
HERC1-207ENST00000560316 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17■□□□□ 0.31
HERC1-207ENST00000560316 COX16Q9P0S2 106 aa17■□□□□ 0.31
HERC1-207ENST00000560316 SLC12A6Q9UHW9 1150 aa17■□□□□ 0.31
HERC1-207ENST00000560316 SALL4Q9UJQ4 1053 aa17■□□□□ 0.31
HERC1-207ENST00000560316 CFAP45Q9UL16 551 aa17■□□□□ 0.31
HERC1-207ENST00000560316 SPINT1O43278 529 aa16.99■□□□□ 0.31
HERC1-207ENST00000560316 SNAP91O60641 907 aa16.99■□□□□ 0.31
HERC1-207ENST00000560316 GJB6O95452 261 aa16.99■□□□□ 0.31
HERC1-207ENST00000560316 FAM87AP0C7U9 286 aa16.99■□□□□ 0.31
HERC1-207ENST00000560316 JUNDP17535 347 aa16.99■□□□□ 0.31
HERC1-207ENST00000560316 RRM1P23921 792 aa16.99■□□□□ 0.31
HERC1-207ENST00000560316 SLC5A2P31639 672 aa16.99■□□□□ 0.31
HERC1-207ENST00000560316 GGCXP38435 758 aa16.99■□□□□ 0.31
HERC1-207ENST00000560316 MLLT3P42568 568 aaPredicted RBP16.99■□□□□ 0.31
HERC1-207ENST00000560316 GPD2P43304 727 aa16.99■□□□□ 0.31
HERC1-207ENST00000560316 EIF4EBP2Q13542 120 aaPredicted RBP16.99■□□□□ 0.31
HERC1-207ENST00000560316 PDE1CQ14123 709 aaPredicted RBP16.99■□□□□ 0.31
HERC1-207ENST00000560316 ARSIQ5FYB1 569 aa16.99■□□□□ 0.31
HERC1-207ENST00000560316 PPM1KQ8N3J5 372 aa16.99■□□□□ 0.31
HERC1-207ENST00000560316 ATP11CQ8NB49 1132 aa16.99■□□□□ 0.31
HERC1-207ENST00000560316 FAM174AQ8TBP5 190 aa16.99■□□□□ 0.31
HERC1-207ENST00000560316 SGF29Q96ES7 293 aa16.99■□□□□ 0.31
HERC1-207ENST00000560316 IL12RB2Q99665 862 aa16.99■□□□□ 0.31
HERC1-207ENST00000560316 CCDC3Q9BQI4 270 aa16.99■□□□□ 0.31
HERC1-207ENST00000560316 POPDC2Q9HBU9 364 aa16.99■□□□□ 0.31
HERC1-207ENST00000560316 IPO11Q9UI26 975 aaKnown RBP16.99■□□□□ 0.31
HERC1-207ENST00000560316 VANGL2Q9ULK5 521 aa16.99■□□□□ 0.31
HERC1-207ENST00000560316 HS3ST2Q9Y278 367 aa16.99■□□□□ 0.31
HERC1-207ENST00000560316 TRPM6Q9BX84 2022 aa16.99■□□□□ 0.31
HERC1-207ENST00000560316 AHCTF1Q8WYP5 2266 aa16.99■□□□□ 0.31
HERC1-207ENST00000560316 TLN1Q9Y490 2541 aaKnown RBP16.98■□□□□ 0.31
HERC1-207ENST00000560316 SMAD6O43541 496 aaKnown RBP16.98■□□□□ 0.31
HERC1-207ENST00000560316 NOBOXO60393 691 aa16.98■□□□□ 0.31
HERC1-207ENST00000560316 PRNPP04156 253 aa16.98■□□□□ 0.31
HERC1-207ENST00000560316 SYKP43405 635 aa16.98■□□□□ 0.31
HERC1-207ENST00000560316 ACADSBP45954 432 aa16.98■□□□□ 0.31
HERC1-207ENST00000560316 YWHAZP63104 245 aaKnown RBP16.98■□□□□ 0.31
HERC1-207ENST00000560316 AUHQ13825 339 aaKnown RBP16.98■□□□□ 0.31
HERC1-207ENST00000560316 SPIDRQ14159 915 aa16.98■□□□□ 0.31
HERC1-207ENST00000560316 TAF5Q15542 800 aa16.98■□□□□ 0.31
HERC1-207ENST00000560316 ATL3Q6DD88 541 aa16.98■□□□□ 0.31
HERC1-207ENST00000560316 DENND1BQ6P3S1 775 aa16.98■□□□□ 0.31
HERC1-207ENST00000560316 ZNF574Q6ZN55 896 aaPredicted RBP16.98■□□□□ 0.31
HERC1-207ENST00000560316 SLC35F3Q8IY50 421 aa16.98■□□□□ 0.31
HERC1-207ENST00000560316 RBFAQ8N0V3 343 aa16.98■□□□□ 0.31
HERC1-207ENST00000560316 SLC35C1Q96A29 364 aa16.98■□□□□ 0.31
HERC1-207ENST00000560316 CCDC114Q96M63 670 aa16.98■□□□□ 0.31
HERC1-207ENST00000560316 NT5C1BQ96P26 610 aa16.98■□□□□ 0.31
HERC1-207ENST00000560316 PSMB7Q99436 277 aa16.98■□□□□ 0.31
HERC1-207ENST00000560316 TRIM62Q9BVG3 475 aa16.98■□□□□ 0.31
HERC1-207ENST00000560316 BOCQ9BWV1 1114 aa16.98■□□□□ 0.31
HERC1-207ENST00000560316 HDAC8Q9BY41 377 aa16.98■□□□□ 0.31
HERC1-207ENST00000560316 MUC3BQ9H195 1237 aa16.98■□□□□ 0.31
HERC1-207ENST00000560316 TCEAL2Q9H3H9 227 aaPredicted RBP16.98■□□□□ 0.31
HERC1-207ENST00000560316 FAM204AQ9H8W3 233 aa16.98■□□□□ 0.31
HERC1-207ENST00000560316 E5RJQ4 531 aa16.97■□□□□ 0.31
HERC1-207ENST00000560316 SLC16A3O15427 465 aaKnown RBP16.97■□□□□ 0.31
HERC1-207ENST00000560316 GCATO75600 419 aa16.97■□□□□ 0.31
HERC1-207ENST00000560316 LEFTY1O75610 366 aa16.97■□□□□ 0.31
HERC1-207ENST00000560316 RABIFP47224 123 aa16.97■□□□□ 0.31
HERC1-207ENST00000560316 NDUFA8P51970 172 aa16.97■□□□□ 0.31
HERC1-207ENST00000560316 RPS21P63220 83 aaKnown RBP16.97■□□□□ 0.31
HERC1-207ENST00000560316 EIF2B5Q13144 721 aaKnown RBP16.97■□□□□ 0.31
HERC1-207ENST00000560316 C1orf61Q13536 156 aa16.97■□□□□ 0.31
HERC1-207ENST00000560316 LINGO4Q6UY18 593 aa16.97■□□□□ 0.31
HERC1-207ENST00000560316 RRAGAQ7L523 313 aa16.97■□□□□ 0.31
HERC1-207ENST00000560316 B3GNT8Q7Z7M8 397 aa16.97■□□□□ 0.31
HERC1-207ENST00000560316 C14orf80Q86SX3 495 aa16.97■□□□□ 0.31
HERC1-207ENST00000560316 JAMLQ86YT9 394 aa16.97■□□□□ 0.31
HERC1-207ENST00000560316 SLC4A5Q9BY07 1137 aa16.97■□□□□ 0.31
HERC1-207ENST00000560316 TNKS2Q9H2K2 1166 aa16.97■□□□□ 0.31
HERC1-207ENST00000560316 DDIT4Q9NX09 232 aa16.97■□□□□ 0.31
HERC1-207ENST00000560316 IL36AQ9UHA7 158 aa16.97■□□□□ 0.31
HERC1-207ENST00000560316 VPS51Q9UID3 782 aa16.97■□□□□ 0.31
HERC1-207ENST00000560316 FLNCQ14315 2725 aa16.96■□□□□ 0.31
HERC1-207ENST00000560316 TPP1O14773 563 aa16.96■□□□□ 0.31
HERC1-207ENST00000560316 PLD2O14939 933 aa16.96■□□□□ 0.31
HERC1-207ENST00000560316 ENDOD1O94919 500 aa16.96■□□□□ 0.31
HERC1-207ENST00000560316 ITGB2P05107 769 aa16.96■□□□□ 0.31
HERC1-207ENST00000560316 SLC2A3P11169 496 aa16.96■□□□□ 0.31
HERC1-207ENST00000560316 HGFP14210 728 aa16.96■□□□□ 0.31
HERC1-207ENST00000560316 CCR1P32246 355 aa16.96■□□□□ 0.31
HERC1-207ENST00000560316 FMO5P49326 533 aa16.96■□□□□ 0.31
HERC1-207ENST00000560316 ADKP55263 362 aaKnown RBP16.96■□□□□ 0.31
HERC1-207ENST00000560316 KRT83P78385 493 aa16.96■□□□□ 0.31
HERC1-207ENST00000560316 PKP1Q13835 747 aa16.96■□□□□ 0.31
HERC1-207ENST00000560316 KIAA1161Q6NSJ0 714 aa16.96■□□□□ 0.31
HERC1-207ENST00000560316 XKR5Q6UX68 686 aa16.96■□□□□ 0.31
HERC1-207ENST00000560316 FBXO39Q8N4B4 442 aa16.96■□□□□ 0.31
HERC1-207ENST00000560316 LIN37Q96GY3 246 aaPredicted RBP16.96■□□□□ 0.31
HERC1-207ENST00000560316 FEM1CQ96JP0 617 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms