RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 FAM167BQ9BTA0 163 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 UBE2OQ9C0C9 1292 aaKnown RBP8.22□□□□□ -1.09
SMAD3-212ENST00000559937 ARHGAP39Q9C0H5 1083 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 SLC39A8Q9C0K1 460 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 C20orf27Q9GZN8 174 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 SIK2Q9H0K1 926 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 TRPV6Q9H1D0 765 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 SLC25A51Q9H1U9 297 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 DENND2DQ9H6A0 471 aaPredicted RBP8.22□□□□□ -1.09
SMAD3-212ENST00000559937 RETREG1Q9H6L5 497 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 ELAC1Q9H777 363 aaKnown RBP8.22□□□□□ -1.09
SMAD3-212ENST00000559937 YY1AP1Q9H869 796 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 NMUR1Q9HB89 426 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 PRDM5Q9NQX1 630 aaPredicted RBP8.22□□□□□ -1.09
SMAD3-212ENST00000559937 BATF3Q9NR55 127 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 IARS2Q9NSE4 1012 aaKnown RBP8.22□□□□□ -1.09
SMAD3-212ENST00000559937 PIH1D1Q9NWS0 290 aaKnown RBP8.22□□□□□ -1.09
SMAD3-212ENST00000559937 OSER1Q9NX31 292 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 TCAF1Q9Y4C2 921 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 PCDHB5Q9Y5E4 795 aa8.22□□□□□ -1.09
SMAD3-212ENST00000559937 IGLV3-10A0A075B6K4 115 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 A0A1W2PQH9 124 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 F8W8V4 182 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 SLCO1B7G3V0H7 640 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 G3V2L1 256 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 SLC22A2O15244 555 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 ITM2AO43736 263 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 TRIM13O60858 407 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 NEBLO76041 1014 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 TM7SF2O76062 418 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 DDHD2O94830 711 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 ITGB1P05556 798 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 C2P06681 752 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 CKBP12277 381 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 PRKAR2AP13861 404 aaKnown RBP8.21□□□□□ -1.1
SMAD3-212ENST00000559937 NMBRP28336 390 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 HOXD10P28358 340 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 CRABP2P29373 138 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 PGM1P36871 562 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 RENBPP51606 427 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 TBX4P57082 545 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 RING1Q06587 406 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 TRIM32Q13049 653 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 OLIG2Q13516 323 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 SLC12A1Q13621 1099 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 HNRNPDQ14103 355 aaKnown RBP8.21□□□□□ -1.1
SMAD3-212ENST00000559937 MRPL58Q14197 206 aaKnown RBP8.21□□□□□ -1.1
SMAD3-212ENST00000559937 TRIP4Q15650 581 aaPredicted RBP8.21□□□□□ -1.1
SMAD3-212ENST00000559937 TRMT5Q32P41 509 aaKnown RBP8.21□□□□□ -1.1
SMAD3-212ENST00000559937 SLC39A12Q504Y0 691 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 FSCBQ5H9T9 825 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 C6orf163Q5TEZ5 329 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 METTL21CQ5VZV1 264 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 DENND5AQ6IQ26 1287 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 TRAF7Q6Q0C0 670 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 RANBP10Q6VN20 620 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 ZYG11AQ6WRX3 759 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 ZCCHC23Q6ZST2 131 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 NET1Q7Z628 596 aaPredicted RBP8.21□□□□□ -1.1
SMAD3-212ENST00000559937 CMC1Q7Z7K0 106 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 TTC7BQ86TV6 843 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 ALYREFQ86V81 257 aaKnown RBP8.21□□□□□ -1.1
SMAD3-212ENST00000559937 TREML1Q86YW5 311 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 C10orf107Q8IVU9 208 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 SCN4BQ8IWT1 228 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 LMNTD2Q8IXW0 634 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.21□□□□□ -1.1
SMAD3-212ENST00000559937 ZNF683Q8IZ20 524 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 GIMAP7Q8NHV1 300 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 CALML6Q8TD86 181 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 HASPINQ8TF76 798 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 MFSD3Q96ES6 412 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 PRR11Q96HE9 360 aaPredicted RBP8.21□□□□□ -1.1
SMAD3-212ENST00000559937 CEP295NLQ96MC4 621 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 FICDQ9BVA6 458 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 C1QTNF1Q9BXJ1 281 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 OXCT2Q9BYC2 517 aaPredicted RBP8.21□□□□□ -1.1
SMAD3-212ENST00000559937 MCOLN1Q9GZU1 580 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 NMRAL1Q9HBL8 299 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 CHRAC1Q9NRG0 131 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 VPS45Q9NRW7 570 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 TMEM248Q9NWD8 314 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 TMEM161AQ9NX61 479 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 CLIC5Q9NZA1 410 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 STOML1Q9UBI4 398 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 TLK1Q9UKI8 766 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.21□□□□□ -1.1
SMAD3-212ENST00000559937 L3MBTL1Q9Y468 752 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 HS3ST4Q9Y661 456 aa8.21□□□□□ -1.1
SMAD3-212ENST00000559937 A0A087X1B8 175 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 HEATR9A2RTY3 570 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 B2RBV5 119 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 ZNF195O14628 629 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 LYPLA1O75608 230 aaPredicted RBP8.2□□□□□ -1.1
SMAD3-212ENST00000559937 CIB2O75838 187 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 PAPSS2O95340 614 aaPredicted RBP8.2□□□□□ -1.1
SMAD3-212ENST00000559937 HSPA4LO95757 839 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 TOP3BO95985 862 aaKnown RBP8.2□□□□□ -1.1
SMAD3-212ENST00000559937 HLA-DQB2P05538 268 aa8.2□□□□□ -1.1
SMAD3-212ENST00000559937 ENO1P06733 434 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms