RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 OR13H1Q8NG92 308 aa13.4□□□□□ -0.26
TPM1-220ENST00000559556 KLK6Q92876 244 aa13.4□□□□□ -0.26
TPM1-220ENST00000559556 IFT43Q96FT9 208 aa13.4□□□□□ -0.26
TPM1-220ENST00000559556 MYOCQ99972 504 aa13.4□□□□□ -0.26
TPM1-220ENST00000559556 HDAC8Q9BY41 377 aa13.4□□□□□ -0.26
TPM1-220ENST00000559556 TKTL2Q9H0I9 626 aa13.4□□□□□ -0.26
TPM1-220ENST00000559556 SYNCQ9H7C4 482 aa13.4□□□□□ -0.26
TPM1-220ENST00000559556 FZD3Q9NPG1 666 aa13.4□□□□□ -0.26
TPM1-220ENST00000559556 UCKL1Q9NWZ5 548 aa13.4□□□□□ -0.26
TPM1-220ENST00000559556 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.4□□□□□ -0.26
TPM1-220ENST00000559556 STAP1Q9ULZ2 295 aa13.4□□□□□ -0.26
TPM1-220ENST00000559556 ZFR2Q9UPR6 939 aaKnown RBP13.4□□□□□ -0.26
TPM1-220ENST00000559556 PAXBP1Q9Y5B6 917 aa13.4□□□□□ -0.26
TPM1-220ENST00000559556 A0A0D9SEW6 157 aa13.39□□□□□ -0.27
TPM1-220ENST00000559556 DRGXA6NNA5 263 aa13.39□□□□□ -0.27
TPM1-220ENST00000559556 K7ERQ8 282 aa13.39□□□□□ -0.27
TPM1-220ENST00000559556 RNF103O00237 685 aa13.39□□□□□ -0.27
TPM1-220ENST00000559556 ATXN7O15265 892 aaPredicted RBP13.39□□□□□ -0.27
TPM1-220ENST00000559556 SMAD6O43541 496 aaKnown RBP13.39□□□□□ -0.27
TPM1-220ENST00000559556 PIAS2O75928 621 aa13.39□□□□□ -0.27
TPM1-220ENST00000559556 GIMD1P0DJR0 217 aa13.39□□□□□ -0.27
TPM1-220ENST00000559556 AKT2P31751 481 aa13.39□□□□□ -0.27
TPM1-220ENST00000559556 CDH5P33151 784 aaPredicted RBP13.39□□□□□ -0.27
TPM1-220ENST00000559556 SCNN1AP37088 669 aa13.39□□□□□ -0.27
TPM1-220ENST00000559556 DAB2P98082 770 aa13.39□□□□□ -0.27
TPM1-220ENST00000559556 TBC1D25Q3MII6 688 aa13.39□□□□□ -0.27
TPM1-220ENST00000559556 HS1BP3Q53T59 392 aa13.39□□□□□ -0.27
TPM1-220ENST00000559556 ACBD5Q5T8D3 534 aaPredicted RBP13.39□□□□□ -0.27
TPM1-220ENST00000559556 GCNT7Q6ZNI0 430 aa13.39□□□□□ -0.27
TPM1-220ENST00000559556 ERN2Q76MJ5 926 aaKnown RBP13.39□□□□□ -0.27
TPM1-220ENST00000559556 ERICH1Q86X53 443 aa13.39□□□□□ -0.27
TPM1-220ENST00000559556 SLC22A18ASQ8N1D0 253 aa13.39□□□□□ -0.27
TPM1-220ENST00000559556 CHST14Q8NCH0 376 aa13.39□□□□□ -0.27
TPM1-220ENST00000559556 FAM174AQ8TBP5 190 aa13.39□□□□□ -0.27
TPM1-220ENST00000559556 FGF11Q92914 225 aa13.39□□□□□ -0.27
TPM1-220ENST00000559556 C1orf74Q96LT6 269 aa13.39□□□□□ -0.27
TPM1-220ENST00000559556 FCRL3Q96P31 734 aaPredicted RBP13.39□□□□□ -0.27
TPM1-220ENST00000559556 CALN1Q9BXU9 219 aa13.39□□□□□ -0.27
TPM1-220ENST00000559556 WDCPQ9H6R7 721 aa13.39□□□□□ -0.27
TPM1-220ENST00000559556 PLCB1Q9NQ66 1216 aa13.39□□□□□ -0.27
TPM1-220ENST00000559556 DYRK4Q9NR20 520 aa13.39□□□□□ -0.27
TPM1-220ENST00000559556 GPR27Q9NS67 375 aa13.39□□□□□ -0.27
TPM1-220ENST00000559556 TMEM51Q9NW97 253 aa13.39□□□□□ -0.27
TPM1-220ENST00000559556 KIAA1468Q9P260 1216 aa13.39□□□□□ -0.27
TPM1-220ENST00000559556 ZNF212Q9UDV6 495 aa13.39□□□□□ -0.27
TPM1-220ENST00000559556 IL36AQ9UHA7 158 aa13.39□□□□□ -0.27
TPM1-220ENST00000559556 FOXN3O00409 490 aaPredicted RBP13.38□□□□□ -0.27
TPM1-220ENST00000559556 ZNF821O75541 412 aaPredicted RBP13.38□□□□□ -0.27
TPM1-220ENST00000559556 C1QL1O75973 258 aa13.38□□□□□ -0.27
TPM1-220ENST00000559556 F9P00740 461 aa13.38□□□□□ -0.27
TPM1-220ENST00000559556 PNMA6AP0CW24 399 aaPredicted RBP13.38□□□□□ -0.27
TPM1-220ENST00000559556 CKMT1AP12532 417 aa13.38□□□□□ -0.27
TPM1-220ENST00000559556 ACTN2P35609 894 aa13.38□□□□□ -0.27
TPM1-220ENST00000559556 GABRB2P47870 512 aa13.38□□□□□ -0.27
TPM1-220ENST00000559556 SULT1E1P49888 294 aa13.38□□□□□ -0.27
TPM1-220ENST00000559556 SLC25A52Q3SY17 297 aa13.38□□□□□ -0.27
TPM1-220ENST00000559556 CDCP2Q5VXM1 449 aa13.38□□□□□ -0.27
TPM1-220ENST00000559556 TFAP2DQ7Z6R9 452 aa13.38□□□□□ -0.27
TPM1-220ENST00000559556 FAM71AQ8IYT1 594 aa13.38□□□□□ -0.27
TPM1-220ENST00000559556 LSM14AQ8ND56 463 aaKnown RBP13.38□□□□□ -0.27
TPM1-220ENST00000559556 GRIN3AQ8TCU5 1115 aa13.38□□□□□ -0.27
TPM1-220ENST00000559556 PPP1R16AQ96I34 528 aa13.38□□□□□ -0.27
TPM1-220ENST00000559556 TBCBQ99426 244 aa13.38□□□□□ -0.27
TPM1-220ENST00000559556 NLGN3Q9NZ94 848 aa13.38□□□□□ -0.27
TPM1-220ENST00000559556 DNAJC12Q9UKB3 198 aa13.38□□□□□ -0.27
TPM1-220ENST00000559556 RAI2Q9Y5P3 530 aa13.38□□□□□ -0.27
TPM1-220ENST00000559556 SNX10Q9Y5X0 201 aa13.38□□□□□ -0.27
TPM1-220ENST00000559556 WASF2Q9Y6W5 498 aa13.38□□□□□ -0.27
TPM1-220ENST00000559556 LY6G6EA0A0G2JKS1 128 aa13.37□□□□□ -0.27
TPM1-220ENST00000559556 ILVBLA1L0T0 632 aa13.37□□□□□ -0.27
TPM1-220ENST00000559556 A6NNZ2 444 aa13.37□□□□□ -0.27
TPM1-220ENST00000559556 FFAR2O15552 330 aa13.37□□□□□ -0.27
TPM1-220ENST00000559556 LZTS3O60299 673 aaPredicted RBP13.37□□□□□ -0.27
TPM1-220ENST00000559556 LEFTY1O75610 366 aa13.37□□□□□ -0.27
TPM1-220ENST00000559556 PCDH8O95206 1070 aa13.37□□□□□ -0.27
TPM1-220ENST00000559556 MT-CO3P00414 261 aa13.37□□□□□ -0.27
TPM1-220ENST00000559556 GP1BAP07359 652 aa13.37□□□□□ -0.27
TPM1-220ENST00000559556 ALPPL2P10696 532 aa13.37□□□□□ -0.27
TPM1-220ENST00000559556 ITGB7P26010 798 aa13.37□□□□□ -0.27
TPM1-220ENST00000559556 OR1E1P30953 314 aa13.37□□□□□ -0.27
TPM1-220ENST00000559556 MTIF2P46199 727 aaKnown RBP13.37□□□□□ -0.27
TPM1-220ENST00000559556 SERPINH1P50454 418 aaKnown RBP13.37□□□□□ -0.27
TPM1-220ENST00000559556 NEK3P51956 506 aa13.37□□□□□ -0.27
TPM1-220ENST00000559556 CLDN2P57739 230 aa13.37□□□□□ -0.27
TPM1-220ENST00000559556 BPIFB4P59827 614 aa13.37□□□□□ -0.27
TPM1-220ENST00000559556 RNASE9P60153 205 aaKnown RBP13.37□□□□□ -0.27
TPM1-220ENST00000559556 TLE3Q04726 772 aa13.37□□□□□ -0.27
TPM1-220ENST00000559556 DEUP1Q05D60 604 aa13.37□□□□□ -0.27
TPM1-220ENST00000559556 MAN2A1Q16706 1144 aa13.37□□□□□ -0.27
TPM1-220ENST00000559556 ARSIQ5FYB1 569 aa13.37□□□□□ -0.27
TPM1-220ENST00000559556 FAM102AQ5T9C2 384 aaPredicted RBP13.37□□□□□ -0.27
TPM1-220ENST00000559556 SEL1L3Q68CR1 1132 aa13.37□□□□□ -0.27
TPM1-220ENST00000559556 KIAA1161Q6NSJ0 714 aa13.37□□□□□ -0.27
TPM1-220ENST00000559556 DPY19L2P1Q6NXN4 242 aa13.37□□□□□ -0.27
TPM1-220ENST00000559556 LRRC31Q6UY01 552 aa13.37□□□□□ -0.27
TPM1-220ENST00000559556 LINGO4Q6UY18 593 aa13.37□□□□□ -0.27
TPM1-220ENST00000559556 KYAT3Q6YP21 454 aaKnown RBP13.37□□□□□ -0.27
TPM1-220ENST00000559556 ZNF783Q6ZMS7 281 aa13.37□□□□□ -0.27
TPM1-220ENST00000559556 KDM7AQ6ZMT4 941 aa13.37□□□□□ -0.27
TPM1-220ENST00000559556 DPY19L3Q6ZPD9 716 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms