RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 GTF2BQ00403 316 aa6.39□□□□□ -1.39
ZEB1-211ENST00000558440 POU5F1Q01860 360 aaKnown RBP6.39□□□□□ -1.39
ZEB1-211ENST00000558440 ZNF33AQ06730 810 aa6.39□□□□□ -1.39
ZEB1-211ENST00000558440 SLC14A1Q13336 389 aa6.39□□□□□ -1.39
ZEB1-211ENST00000558440 POSTNQ15063 836 aa6.39□□□□□ -1.39
ZEB1-211ENST00000558440 DHCR24Q15392 516 aa6.39□□□□□ -1.39
ZEB1-211ENST00000558440 TRIP6Q15654 476 aaKnown RBP6.39□□□□□ -1.39
ZEB1-211ENST00000558440 COL28A1Q2UY09 1125 aa6.39□□□□□ -1.39
ZEB1-211ENST00000558440 PREPLQ4J6C6 727 aaPredicted RBP6.39□□□□□ -1.39
ZEB1-211ENST00000558440 RILPL1Q5EBL4 403 aa6.39□□□□□ -1.39
ZEB1-211ENST00000558440 DENND5BQ6ZUT9 1274 aa6.39□□□□□ -1.39
ZEB1-211ENST00000558440 DDX42Q86XP3 938 aaKnown RBP eCLIP6.39□□□□□ -1.39
ZEB1-211ENST00000558440 ADGRF2Q8IZF7 708 aa6.39□□□□□ -1.39
ZEB1-211ENST00000558440 DEFB119Q8N690 84 aa6.39□□□□□ -1.39
ZEB1-211ENST00000558440 KIAA1958Q8N8K9 716 aa6.39□□□□□ -1.39
ZEB1-211ENST00000558440 RASSF8Q8NHQ8 419 aa6.39□□□□□ -1.39
ZEB1-211ENST00000558440 LRRC15Q8TF66 581 aa6.39□□□□□ -1.39
ZEB1-211ENST00000558440 LCORQ96JN0 433 aaPredicted RBP6.39□□□□□ -1.39
ZEB1-211ENST00000558440 SPATA17Q96L03 361 aa6.39□□□□□ -1.39
ZEB1-211ENST00000558440 CLIC6Q96NY7 704 aa6.39□□□□□ -1.39
ZEB1-211ENST00000558440 JAM3Q9BX67 310 aa6.39□□□□□ -1.39
ZEB1-211ENST00000558440 KRTAP9-8Q9BYQ0 159 aa6.39□□□□□ -1.39
ZEB1-211ENST00000558440 SLC6A20Q9NP91 592 aa6.39□□□□□ -1.39
ZEB1-211ENST00000558440 ZDHHC4Q9NPG8 344 aa6.39□□□□□ -1.39
ZEB1-211ENST00000558440 MAGEC2Q9UBF1 373 aaPredicted RBP6.39□□□□□ -1.39
ZEB1-211ENST00000558440 PPARGC1AQ9UBK2 798 aaKnown RBP6.39□□□□□ -1.39
ZEB1-211ENST00000558440 AGAP1Q9UPQ3 857 aa6.39□□□□□ -1.39
ZEB1-211ENST00000558440 SNX9Q9Y5X1 595 aa6.39□□□□□ -1.39
ZEB1-211ENST00000558440 CPQQ9Y646 472 aa6.39□□□□□ -1.39
ZEB1-211ENST00000558440 PTPRQQ9UMZ3 2332 aa6.39□□□□□ -1.39
ZEB1-211ENST00000558440 MYO18BQ8IUG5 2567 aa6.39□□□□□ -1.39
ZEB1-211ENST00000558440 MYLKQ15746 1914 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 NUMA1Q14980 2115 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 ZNF462Q96JM2 2506 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 TBC1D3BA6NDS4 549 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 SH3BP5O60239 455 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 EIF5BO60841 1220 aaKnown RBP6.38□□□□□ -1.39
ZEB1-211ENST00000558440 NDUFS2O75306 463 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 ZNF217O75362 1048 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 CYP7B1O75881 506 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 FTH1P19P0C7X4 201 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 MBL2P11226 248 aaPredicted RBP6.38□□□□□ -1.39
ZEB1-211ENST00000558440 CD59P13987 128 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 HOXB2P14652 356 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 GNSP15586 552 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 UBA7P41226 1012 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 PPP3CCP48454 512 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 SLC7A9P82251 487 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 MYO1EQ12965 1108 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 MAPRE1Q15691 268 aaKnown RBP6.38□□□□□ -1.39
ZEB1-211ENST00000558440 CCDC142Q17RM4 750 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 PLEKHG6Q3KR16 790 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 EMC10Q5UCC4 262 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 BTBD8Q5XKL5 378 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 ARL6IP4Q66PJ3 421 aaKnown RBP6.38□□□□□ -1.39
ZEB1-211ENST00000558440 VSTM1Q6UX27 236 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 CRELD2Q6UXH1 353 aaPredicted RBP6.38□□□□□ -1.39
ZEB1-211ENST00000558440 OSTM1Q86WC4 334 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 NAXDQ8IW45 347 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 SFTPA1Q8IWL2 248 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 CSGALNACT2Q8N6G5 542 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 LRRC52Q8N7C0 313 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 OR2I1PQ8NGU4 316 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 PIP4K2CQ8TBX8 421 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 ADAMTS14Q8WXS8 1223 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 MYLPFQ96A32 169 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 ZSCAN31Q96LW9 406 aaPredicted RBP6.38□□□□□ -1.39
ZEB1-211ENST00000558440 AK8Q96MA6 479 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 CEP295NLQ96MC4 621 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 CAMK1GQ96NX5 476 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 PKMYT1Q99640 499 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 SYT15Q9BQS2 421 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 FAM213AQ9BRX8 229 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 FAM124BQ9H5Z6 455 aaPredicted RBP6.38□□□□□ -1.39
ZEB1-211ENST00000558440 SMPD4Q9NXE4 827 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 GDAP2Q9NXN4 497 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 CALCOCO1Q9P1Z2 691 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 CFAP97Q9P2B7 532 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 TBC1D14Q9P2M4 693 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 ITGA11Q9UKX5 1188 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 EXOC7Q9UPT5 735 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 APOBEC2Q9Y235 224 aaKnown RBP6.38□□□□□ -1.39
ZEB1-211ENST00000558440 KIF3AQ9Y496 699 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 STYXL1Q9Y6J8 313 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 CKAP5Q14008 2032 aa6.38□□□□□ -1.39
ZEB1-211ENST00000558440 ZNF840PA6NDX5 716 aa6.37□□□□□ -1.39
ZEB1-211ENST00000558440 GABRDO14764 452 aa6.37□□□□□ -1.39
ZEB1-211ENST00000558440 PRODHO43272 600 aa6.37□□□□□ -1.39
ZEB1-211ENST00000558440 HCRTO43612 131 aa6.37□□□□□ -1.39
ZEB1-211ENST00000558440 LDHAP00338 332 aaKnown RBP6.37□□□□□ -1.39
ZEB1-211ENST00000558440 TMEM191BP0C7N4 346 aa6.37□□□□□ -1.39
ZEB1-211ENST00000558440 PABPC1P11940 636 aaKnown RBP6.37□□□□□ -1.39
ZEB1-211ENST00000558440 GABRG2P18507 467 aa6.37□□□□□ -1.39
ZEB1-211ENST00000558440 BDNFP23560 247 aa6.37□□□□□ -1.39
ZEB1-211ENST00000558440 GRK2P25098 689 aa6.37□□□□□ -1.39
ZEB1-211ENST00000558440 GRK3P35626 688 aa6.37□□□□□ -1.39
ZEB1-211ENST00000558440 PSMC1P62191 440 aaKnown RBP6.37□□□□□ -1.39
ZEB1-211ENST00000558440 RBP5P82980 135 aa6.37□□□□□ -1.39
ZEB1-211ENST00000558440 ZXDBP98169 803 aa6.37□□□□□ -1.39
ZEB1-211ENST00000558440 GAD2Q05329 585 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms