RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 FKBP6O75344 327 aa18■□□□□ 0.47
XRCC3-218ENST00000557439 MPOP05164 745 aa18■□□□□ 0.47
XRCC3-218ENST00000557439 SLC35E2BP0CK96 405 aa18■□□□□ 0.47
XRCC3-218ENST00000557439 GNAT1P11488 350 aa18■□□□□ 0.47
XRCC3-218ENST00000557439 CHRNA4P43681 627 aa18■□□□□ 0.47
XRCC3-218ENST00000557439 BRCC3P46736 316 aa18■□□□□ 0.47
XRCC3-218ENST00000557439 CRYBB1P53674 252 aaPredicted RBP18■□□□□ 0.47
XRCC3-218ENST00000557439 CDC42EP1Q00587 391 aa18■□□□□ 0.47
XRCC3-218ENST00000557439 TIGD5Q53EQ6 642 aa18■□□□□ 0.47
XRCC3-218ENST00000557439 CENPLQ8N0S6 344 aaPredicted RBP18■□□□□ 0.47
XRCC3-218ENST00000557439 GDPD5Q8WTR4 605 aa18■□□□□ 0.47
XRCC3-218ENST00000557439 USP13Q92995 863 aaPredicted RBP18■□□□□ 0.47
XRCC3-218ENST00000557439 SLC9A7Q96T83 725 aa18■□□□□ 0.47
XRCC3-218ENST00000557439 TSC22D3Q99576 134 aa18■□□□□ 0.47
XRCC3-218ENST00000557439 MCMBPQ9BTE3 642 aa18■□□□□ 0.47
XRCC3-218ENST00000557439 CNGB3Q9NQW8 809 aa18■□□□□ 0.47
XRCC3-218ENST00000557439 ASB3Q9Y575 518 aa18■□□□□ 0.47
XRCC3-218ENST00000557439 MYADML2A6NDP7 307 aa18■□□□□ 0.47
XRCC3-218ENST00000557439 NEMP2A6NFY4 417 aa18■□□□□ 0.47
XRCC3-218ENST00000557439 STX16-NPEPL1H3BU86 382 aa18■□□□□ 0.47
XRCC3-218ENST00000557439 CFLARO15519 480 aa18■□□□□ 0.47
XRCC3-218ENST00000557439 PIK3R1P27986 724 aa18■□□□□ 0.47
XRCC3-218ENST00000557439 CDK7P50613 346 aa18■□□□□ 0.47
XRCC3-218ENST00000557439 PKNOX1P55347 436 aa18■□□□□ 0.47
XRCC3-218ENST00000557439 DLG1Q12959 904 aa18■□□□□ 0.47
XRCC3-218ENST00000557439 TRIP10Q15642 601 aa18■□□□□ 0.47
XRCC3-218ENST00000557439 ARL13BQ3SXY8 428 aa18■□□□□ 0.47
XRCC3-218ENST00000557439 FSTL5Q8N475 847 aaPredicted RBP18■□□□□ 0.47
XRCC3-218ENST00000557439 EPAS1Q99814 870 aa18■□□□□ 0.47
XRCC3-218ENST00000557439 SFMBT1Q9UHJ3 866 aa18■□□□□ 0.47
XRCC3-218ENST00000557439 TLK1Q9UKI8 766 aa18■□□□□ 0.47
XRCC3-218ENST00000557439 C17orf102A2RUQ5 167 aa17.99■□□□□ 0.47
XRCC3-218ENST00000557439 PMPCBO75439 489 aa17.99■□□□□ 0.47
XRCC3-218ENST00000557439 PGK1P00558 417 aa17.99■□□□□ 0.47
XRCC3-218ENST00000557439 ZNF865P0CJ78 1059 aaPredicted RBP17.99■□□□□ 0.47
XRCC3-218ENST00000557439 BTKQ06187 659 aa17.99■□□□□ 0.47
XRCC3-218ENST00000557439 RAB41Q5JT25 222 aa17.99■□□□□ 0.47
XRCC3-218ENST00000557439 FBXW8Q8N3Y1 598 aa17.99■□□□□ 0.47
XRCC3-218ENST00000557439 CCNYL1Q8N7R7 359 aa17.99■□□□□ 0.47
XRCC3-218ENST00000557439 GTF3C2Q8WUA4 911 aaPredicted RBP17.99■□□□□ 0.47
XRCC3-218ENST00000557439 NXNL1Q96CM4 212 aa17.99■□□□□ 0.47
XRCC3-218ENST00000557439 RTP3Q9BQQ7 232 aa17.99■□□□□ 0.47
XRCC3-218ENST00000557439 FICDQ9BVA6 458 aa17.99■□□□□ 0.47
XRCC3-218ENST00000557439 IL22Q9GZX6 179 aa17.99■□□□□ 0.47
XRCC3-218ENST00000557439 ILKAPQ9H0C8 392 aaPredicted RBP17.99■□□□□ 0.47
XRCC3-218ENST00000557439 SUDS3Q9H7L9 328 aaPredicted RBP17.99■□□□□ 0.47
XRCC3-218ENST00000557439 XPR1Q9UBH6 696 aa17.99■□□□□ 0.47
XRCC3-218ENST00000557439 ARHGAP26Q9UNA1 814 aa17.99■□□□□ 0.47
XRCC3-218ENST00000557439 GRID2O43424 1007 aa17.99■□□□□ 0.47
XRCC3-218ENST00000557439 TIMM44O43615 452 aa17.99■□□□□ 0.47
XRCC3-218ENST00000557439 FBXO21O94952 628 aa17.99■□□□□ 0.47
XRCC3-218ENST00000557439 GLDCP23378 1020 aa17.99■□□□□ 0.47
XRCC3-218ENST00000557439 CDH17Q12864 832 aa17.99■□□□□ 0.47
XRCC3-218ENST00000557439 ANO4Q32M45 955 aa17.99■□□□□ 0.47
XRCC3-218ENST00000557439 DQX1Q8TE96 717 aaKnown RBP17.99■□□□□ 0.47
XRCC3-218ENST00000557439 DPF3Q92784 378 aa17.99■□□□□ 0.47
XRCC3-218ENST00000557439 GPR22Q99680 433 aa17.99■□□□□ 0.47
XRCC3-218ENST00000557439 DNAI2Q9GZS0 605 aa17.99■□□□□ 0.47
XRCC3-218ENST00000557439 ST3GAL5Q9UNP4 418 aa17.99■□□□□ 0.47
XRCC3-218ENST00000557439 H3BNX3 289 aa17.98■□□□□ 0.47
XRCC3-218ENST00000557439 HAS3O00219 553 aa17.98■□□□□ 0.47
XRCC3-218ENST00000557439 MATN2O00339 956 aa17.98■□□□□ 0.47
XRCC3-218ENST00000557439 POMCP01189 267 aa17.98■□□□□ 0.47
XRCC3-218ENST00000557439 TFEBP19484 476 aa17.98■□□□□ 0.47
XRCC3-218ENST00000557439 CXCR3P49682 368 aa17.98■□□□□ 0.47
XRCC3-218ENST00000557439 ITPRIPL1Q6GPH6 555 aa17.98■□□□□ 0.47
XRCC3-218ENST00000557439 TMC7Q7Z402 723 aa17.98■□□□□ 0.47
XRCC3-218ENST00000557439 PDSS2Q86YH6 399 aa17.98■□□□□ 0.47
XRCC3-218ENST00000557439 LSMEM2Q8N112 164 aa17.98■□□□□ 0.47
XRCC3-218ENST00000557439 SNX31Q8N9S9 440 aa17.98■□□□□ 0.47
XRCC3-218ENST00000557439 ZC3H15Q8WU90 426 aaKnown RBP17.98■□□□□ 0.47
XRCC3-218ENST00000557439 FAM105AQ9NUU6 356 aa17.98■□□□□ 0.47
XRCC3-218ENST00000557439 C9IYK1 514 aa17.98■□□□□ 0.47
XRCC3-218ENST00000557439 DLX3O60479 287 aa17.98■□□□□ 0.47
XRCC3-218ENST00000557439 MOCS2O96007 188 aaPredicted RBP17.98■□□□□ 0.47
XRCC3-218ENST00000557439 THP07101 528 aa17.98■□□□□ 0.47
XRCC3-218ENST00000557439 ARNTP27540 789 aa17.98■□□□□ 0.47
XRCC3-218ENST00000557439 NPY2RP49146 381 aa17.98■□□□□ 0.47
XRCC3-218ENST00000557439 GJA9P57773 515 aa17.98■□□□□ 0.47
XRCC3-218ENST00000557439 RCN3Q96D15 328 aa17.98■□□□□ 0.47
XRCC3-218ENST00000557439 MTF2Q9Y483 593 aaPredicted RBP17.98■□□□□ 0.47
XRCC3-218ENST00000557439 ARL5CA6NH57 179 aa17.97■□□□□ 0.47
XRCC3-218ENST00000557439 TXNDC9O14530 226 aa17.97■□□□□ 0.47
XRCC3-218ENST00000557439 NCAM2O15394 837 aa17.97■□□□□ 0.47
XRCC3-218ENST00000557439 MYL4P12829 197 aa17.97■□□□□ 0.47
XRCC3-218ENST00000557439 RPL14P50914 215 aaKnown RBP17.97■□□□□ 0.47
XRCC3-218ENST00000557439 MTTPP55157 894 aa17.97■□□□□ 0.47
XRCC3-218ENST00000557439 POLE2P56282 527 aa17.97■□□□□ 0.47
XRCC3-218ENST00000557439 PCBP1Q15365 356 aaKnown RBP eCLIP17.97■□□□□ 0.47
XRCC3-218ENST00000557439 CNGA3Q16281 694 aa17.97■□□□□ 0.47
XRCC3-218ENST00000557439 PCSK7Q16549 785 aa17.97■□□□□ 0.47
XRCC3-218ENST00000557439 GRAMD1BQ3KR37 738 aa17.97■□□□□ 0.47
XRCC3-218ENST00000557439 SEL1L3Q68CR1 1132 aa17.97■□□□□ 0.47
XRCC3-218ENST00000557439 ZYG11AQ6WRX3 759 aa17.97■□□□□ 0.47
XRCC3-218ENST00000557439 LRRTM3Q86VH5 581 aa17.97■□□□□ 0.47
XRCC3-218ENST00000557439 RNF135Q8IUD6 432 aa17.97■□□□□ 0.47
XRCC3-218ENST00000557439 CDRT15Q96T59 188 aa17.97■□□□□ 0.47
XRCC3-218ENST00000557439 PRDM16Q9HAZ2 1276 aa17.97■□□□□ 0.47
XRCC3-218ENST00000557439 MPP6Q9NZW5 540 aa17.97■□□□□ 0.47
XRCC3-218ENST00000557439 TRHDEQ9UKU6 1024 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms