RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 FBXO39Q8N4B4 442 aa14.26□□□□□ -0.13
ACTN1-219ENST00000556432 UBR7Q8N806 425 aa14.26□□□□□ -0.13
ACTN1-219ENST00000556432 PPP1R16AQ96I34 528 aa14.26□□□□□ -0.13
ACTN1-219ENST00000556432 BMFQ96LC9 184 aa14.26□□□□□ -0.13
ACTN1-219ENST00000556432 CCDC3Q9BQI4 270 aa14.26□□□□□ -0.13
ACTN1-219ENST00000556432 SLC17A9Q9BYT1 436 aa14.26□□□□□ -0.13
ACTN1-219ENST00000556432 SALL4Q9UJQ4 1053 aa14.26□□□□□ -0.13
ACTN1-219ENST00000556432 HS3ST3A1Q9Y663 406 aa14.26□□□□□ -0.13
ACTN1-219ENST00000556432 RP1P56715 2156 aa14.26□□□□□ -0.13
ACTN1-219ENST00000556432 TEX15Q9BXT5 2789 aa14.25□□□□□ -0.13
ACTN1-219ENST00000556432 FPGTO14772 594 aa14.25□□□□□ -0.13
ACTN1-219ENST00000556432 CASC3O15234 703 aaKnown RBP14.25□□□□□ -0.13
ACTN1-219ENST00000556432 RAD51BO15315 384 aa14.25□□□□□ -0.13
ACTN1-219ENST00000556432 PPFIA2O75334 1257 aa14.25□□□□□ -0.13
ACTN1-219ENST00000556432 PAK4O96013 591 aaPredicted RBP14.25□□□□□ -0.13
ACTN1-219ENST00000556432 MT-CO1P00395 513 aa14.25□□□□□ -0.13
ACTN1-219ENST00000556432 AFPP02771 609 aaKnown RBP14.25□□□□□ -0.13
ACTN1-219ENST00000556432 SLC2A3P11169 496 aa14.25□□□□□ -0.13
ACTN1-219ENST00000556432 SRCP12931 536 aa14.25□□□□□ -0.13
ACTN1-219ENST00000556432 RRM1P23921 792 aa14.25□□□□□ -0.13
ACTN1-219ENST00000556432 PDX1P52945 283 aa14.25□□□□□ -0.13
ACTN1-219ENST00000556432 RPS21P63220 83 aaKnown RBP14.25□□□□□ -0.13
ACTN1-219ENST00000556432 KRT83P78385 493 aa14.25□□□□□ -0.13
ACTN1-219ENST00000556432 TLE1Q04724 770 aa14.25□□□□□ -0.13
ACTN1-219ENST00000556432 SRSF6Q13247 344 aaKnown RBP14.25□□□□□ -0.13
ACTN1-219ENST00000556432 SGCGQ13326 291 aa14.25□□□□□ -0.13
ACTN1-219ENST00000556432 TMEM259Q4ZIN3 620 aa14.25□□□□□ -0.13
ACTN1-219ENST00000556432 PRRT3Q5FWE3 981 aa14.25□□□□□ -0.13
ACTN1-219ENST00000556432 ARSIQ5FYB1 569 aa14.25□□□□□ -0.13
ACTN1-219ENST00000556432 FBXL22Q6P050 247 aa14.25□□□□□ -0.13
ACTN1-219ENST00000556432 SLC35F3Q8IY50 421 aa14.25□□□□□ -0.13
ACTN1-219ENST00000556432 PPM1KQ8N3J5 372 aa14.25□□□□□ -0.13
ACTN1-219ENST00000556432 ZSCAN1Q8NBB4 408 aa14.25□□□□□ -0.13
ACTN1-219ENST00000556432 TMIEQ8NEW7 156 aa14.25□□□□□ -0.13
ACTN1-219ENST00000556432 OR52K2Q8NGK3 314 aa14.25□□□□□ -0.13
ACTN1-219ENST00000556432 OR2A12Q8NGT7 310 aa14.25□□□□□ -0.13
ACTN1-219ENST00000556432 ALG14Q96F25 216 aa14.25□□□□□ -0.13
ACTN1-219ENST00000556432 NT5C1BQ96P26 610 aa14.25□□□□□ -0.13
ACTN1-219ENST00000556432 PRMT1Q99873 361 aaKnown RBP14.25□□□□□ -0.13
ACTN1-219ENST00000556432 ZSWIM1Q9BR11 485 aa14.25□□□□□ -0.13
ACTN1-219ENST00000556432 STRADBQ9C0K7 418 aa14.25□□□□□ -0.13
ACTN1-219ENST00000556432 POPDC2Q9HBU9 364 aa14.25□□□□□ -0.13
ACTN1-219ENST00000556432 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.25□□□□□ -0.13
ACTN1-219ENST00000556432 DDIT4Q9NX09 232 aa14.25□□□□□ -0.13
ACTN1-219ENST00000556432 SPASTQ9UBP0 616 aa14.25□□□□□ -0.13
ACTN1-219ENST00000556432 APOBEC3BQ9UH17 382 aaKnown RBP14.25□□□□□ -0.13
ACTN1-219ENST00000556432 KLF15Q9UIH9 416 aa14.25□□□□□ -0.13
ACTN1-219ENST00000556432 VANGL2Q9ULK5 521 aa14.25□□□□□ -0.13
ACTN1-219ENST00000556432 COQ4Q9Y3A0 265 aa14.25□□□□□ -0.13
ACTN1-219ENST00000556432 K7ERQ8 282 aa14.24□□□□□ -0.13
ACTN1-219ENST00000556432 TPP1O14773 563 aa14.24□□□□□ -0.13
ACTN1-219ENST00000556432 SNAP91O60641 907 aa14.24□□□□□ -0.13
ACTN1-219ENST00000556432 ENDOD1O94919 500 aa14.24□□□□□ -0.13
ACTN1-219ENST00000556432 ANXA6P08133 673 aa14.24□□□□□ -0.13
ACTN1-219ENST00000556432 HGFP14210 728 aa14.24□□□□□ -0.13
ACTN1-219ENST00000556432 CCR1P32246 355 aa14.24□□□□□ -0.13
ACTN1-219ENST00000556432 UGT1A5P35504 534 aa14.24□□□□□ -0.13
ACTN1-219ENST00000556432 GGCXP38435 758 aa14.24□□□□□ -0.13
ACTN1-219ENST00000556432 ACADSBP45954 432 aa14.24□□□□□ -0.13
ACTN1-219ENST00000556432 IRAK1P51617 712 aa14.24□□□□□ -0.13
ACTN1-219ENST00000556432 NEK3P51956 506 aa14.24□□□□□ -0.13
ACTN1-219ENST00000556432 PITX1P78337 314 aaPredicted RBP14.24□□□□□ -0.13
ACTN1-219ENST00000556432 CDK17Q00537 523 aa14.24□□□□□ -0.13
ACTN1-219ENST00000556432 C1orf61Q13536 156 aa14.24□□□□□ -0.13
ACTN1-219ENST00000556432 MANEAQ5SRI9 462 aa14.24□□□□□ -0.13
ACTN1-219ENST00000556432 KIAA1161Q6NSJ0 714 aa14.24□□□□□ -0.13
ACTN1-219ENST00000556432 ESRP1Q6NXG1 681 aaKnown RBP14.24□□□□□ -0.13
ACTN1-219ENST00000556432 RAB11FIP2Q7L804 512 aa14.24□□□□□ -0.13
ACTN1-219ENST00000556432 VASH2Q86V25 355 aa14.24□□□□□ -0.13
ACTN1-219ENST00000556432 RBFAQ8N0V3 343 aa14.24□□□□□ -0.13
ACTN1-219ENST00000556432 CHST14Q8NCH0 376 aa14.24□□□□□ -0.13
ACTN1-219ENST00000556432 BTN2A2Q8WVV5 523 aa14.24□□□□□ -0.13
ACTN1-219ENST00000556432 LIN37Q96GY3 246 aaPredicted RBP14.24□□□□□ -0.13
ACTN1-219ENST00000556432 FEM1CQ96JP0 617 aa14.24□□□□□ -0.13
ACTN1-219ENST00000556432 PPP1R13BQ96KQ4 1090 aa14.24□□□□□ -0.13
ACTN1-219ENST00000556432 C2orf49Q9BVC5 232 aaPredicted RBP14.24□□□□□ -0.13
ACTN1-219ENST00000556432 HDAC8Q9BY41 377 aa14.24□□□□□ -0.13
ACTN1-219ENST00000556432 FOXP3Q9BZS1 431 aa14.24□□□□□ -0.13
ACTN1-219ENST00000556432 TNKS2Q9H2K2 1166 aa14.24□□□□□ -0.13
ACTN1-219ENST00000556432 SEPT10Q9P0V9 454 aa14.24□□□□□ -0.13
ACTN1-219ENST00000556432 GULP1Q9UBP9 304 aa14.24□□□□□ -0.13
ACTN1-219ENST00000556432 PISDQ9UG56 409 aa14.24□□□□□ -0.13
ACTN1-219ENST00000556432 IL36AQ9UHA7 158 aa14.24□□□□□ -0.13
ACTN1-219ENST00000556432 CFAP45Q9UL16 551 aa14.24□□□□□ -0.13
ACTN1-219ENST00000556432 PADI4Q9UM07 663 aa14.24□□□□□ -0.13
ACTN1-219ENST00000556432 DOLKQ9UPQ8 538 aa14.24□□□□□ -0.13
ACTN1-219ENST00000556432 HS3ST2Q9Y278 367 aa14.24□□□□□ -0.13
ACTN1-219ENST00000556432 PCDHGA7Q9Y5G6 932 aa14.24□□□□□ -0.13
ACTN1-219ENST00000556432 SPTAN1Q13813 2472 aaKnown RBP14.24□□□□□ -0.13
ACTN1-219ENST00000556432 TRPM6Q9BX84 2022 aa14.24□□□□□ -0.13
ACTN1-219ENST00000556432 COL27A1Q8IZC6 1860 aaPredicted RBP14.23□□□□□ -0.13
ACTN1-219ENST00000556432 RNF225M0QZC1 329 aaPredicted RBP14.23□□□□□ -0.13
ACTN1-219ENST00000556432 AGRPO00253 132 aa14.23□□□□□ -0.13
ACTN1-219ENST00000556432 SLC16A3O15427 465 aaKnown RBP14.23□□□□□ -0.13
ACTN1-219ENST00000556432 CLDN11O75508 207 aa14.23□□□□□ -0.13
ACTN1-219ENST00000556432 RHOCP08134 193 aa14.23□□□□□ -0.13
ACTN1-219ENST00000556432 JMJD7P0C870 316 aa14.23□□□□□ -0.13
ACTN1-219ENST00000556432 ITGB6P18564 788 aa14.23□□□□□ -0.13
ACTN1-219ENST00000556432 SYKP43405 635 aa14.23□□□□□ -0.13
ACTN1-219ENST00000556432 DNA2P51530 1060 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms