RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 TCP11X2Q5H9J9 407 aa11.09□□□□□ -0.63
TDP1-212ENST00000555565 BRMS1LQ5PSV4 323 aa11.09□□□□□ -0.63
TDP1-212ENST00000555565 BROXQ5VW32 411 aa11.09□□□□□ -0.63
TDP1-212ENST00000555565 INO80CQ6PI98 192 aaPredicted RBP11.09□□□□□ -0.63
TDP1-212ENST00000555565 SND1Q7KZF4 910 aaKnown RBP eCLIP11.09□□□□□ -0.63
TDP1-212ENST00000555565 XYLT1Q86Y38 959 aa11.09□□□□□ -0.63
TDP1-212ENST00000555565 ZNF683Q8IZ20 524 aa11.09□□□□□ -0.63
TDP1-212ENST00000555565 LSMEM2Q8N112 164 aa11.09□□□□□ -0.63
TDP1-212ENST00000555565 EXD3Q8N9H8 876 aa11.09□□□□□ -0.63
TDP1-212ENST00000555565 MFSD2AQ8NA29 543 aa11.09□□□□□ -0.63
TDP1-212ENST00000555565 KCNE4Q8WWG9 221 aa11.09□□□□□ -0.63
TDP1-212ENST00000555565 FAM131CQ96AQ9 280 aa11.09□□□□□ -0.63
TDP1-212ENST00000555565 C18orf8Q96DM3 657 aa11.09□□□□□ -0.63
TDP1-212ENST00000555565 PGAP3Q96FM1 320 aaPredicted RBP11.09□□□□□ -0.63
TDP1-212ENST00000555565 SERAC1Q96JX3 654 aa11.09□□□□□ -0.63
TDP1-212ENST00000555565 SPAG5Q96R06 1193 aa11.09□□□□□ -0.63
TDP1-212ENST00000555565 TBCBQ99426 244 aa11.09□□□□□ -0.63
TDP1-212ENST00000555565 TKTL2Q9H0I9 626 aa11.09□□□□□ -0.63
TDP1-212ENST00000555565 PDCL3Q9H2J4 239 aa11.09□□□□□ -0.63
TDP1-212ENST00000555565 WDCPQ9H6R7 721 aa11.09□□□□□ -0.63
TDP1-212ENST00000555565 CAAP1Q9H8G2 361 aa11.09□□□□□ -0.63
TDP1-212ENST00000555565 ARHGEF38Q9NXL2 777 aa11.09□□□□□ -0.63
TDP1-212ENST00000555565 RRN3Q9NYV6 651 aa11.09□□□□□ -0.63
TDP1-212ENST00000555565 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.09□□□□□ -0.63
TDP1-212ENST00000555565 SARDHQ9UL12 918 aa11.09□□□□□ -0.63
TDP1-212ENST00000555565 TBC1D30Q9Y2I9 924 aa11.09□□□□□ -0.63
TDP1-212ENST00000555565 SNX10Q9Y5X0 201 aa11.09□□□□□ -0.63
TDP1-212ENST00000555565 F8VZ95 297 aa11.08□□□□□ -0.64
TDP1-212ENST00000555565 EEF1GP26641 437 aaKnown RBP11.08□□□□□ -0.64
TDP1-212ENST00000555565 FLT3P36888 993 aa11.08□□□□□ -0.64
TDP1-212ENST00000555565 SULT1E1P49888 294 aa11.08□□□□□ -0.64
TDP1-212ENST00000555565 CDH4P55283 916 aa11.08□□□□□ -0.64
TDP1-212ENST00000555565 GABREP78334 506 aa11.08□□□□□ -0.64
TDP1-212ENST00000555565 DEUP1Q05D60 604 aa11.08□□□□□ -0.64
TDP1-212ENST00000555565 DLG2Q15700 870 aa11.08□□□□□ -0.64
TDP1-212ENST00000555565 SLC25A52Q3SY17 297 aa11.08□□□□□ -0.64
TDP1-212ENST00000555565 ALFQ53S48 1182 aa11.08□□□□□ -0.64
TDP1-212ENST00000555565 CT47A1Q5JQC4 288 aaPredicted RBP11.08□□□□□ -0.64
TDP1-212ENST00000555565 ARTNQ5T4W7 220 aa11.08□□□□□ -0.64
TDP1-212ENST00000555565 FAM102AQ5T9C2 384 aaPredicted RBP11.08□□□□□ -0.64
TDP1-212ENST00000555565 TAF3Q5VWG9 929 aa11.08□□□□□ -0.64
TDP1-212ENST00000555565 TRNP1Q6NT89 227 aa11.08□□□□□ -0.64
TDP1-212ENST00000555565 CLEC17AQ6ZS10 378 aa11.08□□□□□ -0.64
TDP1-212ENST00000555565 NOP9Q86U38 636 aaKnown RBP11.08□□□□□ -0.64
TDP1-212ENST00000555565 OR14C36Q8NHC7 312 aa11.08□□□□□ -0.64
TDP1-212ENST00000555565 EPS8L1Q8TE68 723 aa11.08□□□□□ -0.64
TDP1-212ENST00000555565 PRR11Q96HE9 360 aaPredicted RBP11.08□□□□□ -0.64
TDP1-212ENST00000555565 PPP1R9BQ96SB3 815 aa11.08□□□□□ -0.64
TDP1-212ENST00000555565 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.08□□□□□ -0.64
TDP1-212ENST00000555565 STK33Q9BYT3 514 aa11.08□□□□□ -0.64
TDP1-212ENST00000555565 POLR1BQ9H9Y6 1135 aa11.08□□□□□ -0.64
TDP1-212ENST00000555565 TMPRSS4Q9NRS4 437 aa11.08□□□□□ -0.64
TDP1-212ENST00000555565 LMBRD1Q9NUN5 540 aa11.08□□□□□ -0.64
TDP1-212ENST00000555565 SLC25A13Q9UJS0 675 aa11.08□□□□□ -0.64
TDP1-212ENST00000555565 VPS28Q9UK41 221 aa11.08□□□□□ -0.64
TDP1-212ENST00000555565 PPM1HQ9ULR3 514 aa11.08□□□□□ -0.64
TDP1-212ENST00000555565 STAP1Q9ULZ2 295 aa11.08□□□□□ -0.64
TDP1-212ENST00000555565 UNC79Q9P2D8 2635 aa11.07□□□□□ -0.64
TDP1-212ENST00000555565 TBC1D3DA0A087WVF3 549 aa11.07□□□□□ -0.64
TDP1-212ENST00000555565 TBC1D3IA0A087WXS9 549 aa11.07□□□□□ -0.64
TDP1-212ENST00000555565 TBC1D3EA0A087X179 549 aa11.07□□□□□ -0.64
TDP1-212ENST00000555565 TBC1D3KA0A087X1G2 549 aa11.07□□□□□ -0.64
TDP1-212ENST00000555565 LY6G6EA0A0G2JKS1 128 aa11.07□□□□□ -0.64
TDP1-212ENST00000555565 TBC1D3FA6NER0 549 aaPredicted RBP11.07□□□□□ -0.64
TDP1-212ENST00000555565 DRGXA6NNA5 263 aa11.07□□□□□ -0.64
TDP1-212ENST00000555565 TBC1D3LB9A6J9 549 aa11.07□□□□□ -0.64
TDP1-212ENST00000555565 MCF2LO15068 1137 aa11.07□□□□□ -0.64
TDP1-212ENST00000555565 EFSO43281 561 aa11.07□□□□□ -0.64
TDP1-212ENST00000555565 LZTS3O60299 673 aaPredicted RBP11.07□□□□□ -0.64
TDP1-212ENST00000555565 OPA1O60313 960 aa11.07□□□□□ -0.64
TDP1-212ENST00000555565 SDC3O75056 442 aa11.07□□□□□ -0.64
TDP1-212ENST00000555565 RTN2O75298 545 aa11.07□□□□□ -0.64
TDP1-212ENST00000555565 USP12O75317 370 aa11.07□□□□□ -0.64
TDP1-212ENST00000555565 LSM8O95777 96 aaKnown RBP11.07□□□□□ -0.64
TDP1-212ENST00000555565 MT-CO1P00395 513 aa11.07□□□□□ -0.64
TDP1-212ENST00000555565 F9P00740 461 aa11.07□□□□□ -0.64
TDP1-212ENST00000555565 MMEP08473 750 aa11.07□□□□□ -0.64
TDP1-212ENST00000555565 TBC1D3HP0C7X1 549 aa11.07□□□□□ -0.64
TDP1-212ENST00000555565 SRCP12931 536 aa11.07□□□□□ -0.64
TDP1-212ENST00000555565 PPP2CBP62714 309 aa11.07□□□□□ -0.64
TDP1-212ENST00000555565 PPP2CAP67775 309 aa11.07□□□□□ -0.64
TDP1-212ENST00000555565 NOMO3P69849 1222 aa11.07□□□□□ -0.64
TDP1-212ENST00000555565 LINC00303Q3SY05 128 aa11.07□□□□□ -0.64
TDP1-212ENST00000555565 ACCSLQ4AC99 568 aa11.07□□□□□ -0.64
TDP1-212ENST00000555565 CDKAL1Q5VV42 579 aa11.07□□□□□ -0.64
TDP1-212ENST00000555565 TBC1D3GQ6DHY5 549 aa11.07□□□□□ -0.64
TDP1-212ENST00000555565 TBC1D3CQ6IPX1 549 aa11.07□□□□□ -0.64
TDP1-212ENST00000555565 IGF2-ASQ6U949 168 aa11.07□□□□□ -0.64
TDP1-212ENST00000555565 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.07□□□□□ -0.64
TDP1-212ENST00000555565 Q6ZVU0 165 aa11.07□□□□□ -0.64
TDP1-212ENST00000555565 BNIPLQ7Z465 357 aa11.07□□□□□ -0.64
TDP1-212ENST00000555565 DSG4Q86SJ6 1040 aa11.07□□□□□ -0.64
TDP1-212ENST00000555565 TBC1D3Q8IZP1 549 aaPredicted RBP11.07□□□□□ -0.64
TDP1-212ENST00000555565 OXR1Q8N573 874 aa11.07□□□□□ -0.64
TDP1-212ENST00000555565 SH2D3CQ8N5H7 860 aa11.07□□□□□ -0.64
TDP1-212ENST00000555565 CPA5Q8WXQ8 436 aa11.07□□□□□ -0.64
TDP1-212ENST00000555565 OR8D1Q8WZ84 308 aa11.07□□□□□ -0.64
TDP1-212ENST00000555565 VCPIP1Q96JH7 1222 aa11.07□□□□□ -0.64
TDP1-212ENST00000555565 PSMB7Q99436 277 aa11.07□□□□□ -0.64
TDP1-212ENST00000555565 TRIM4Q9C037 500 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms