RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 C20orf96Q9NUD7 363 aaPredicted RBP9.7□□□□□ -0.86
SIX4-202ENST00000554079 PCDHGC3Q9UN70 934 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 RAD54BQ9Y620 910 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 PMF1-BGLAPU3KQ54 211 aa9.7□□□□□ -0.86
SIX4-202ENST00000554079 GAKO14976 1311 aa9.69□□□□□ -0.86
SIX4-202ENST00000554079 PLIN4Q96Q06 1357 aa9.69□□□□□ -0.86
SIX4-202ENST00000554079 ARID2Q68CP9 1835 aa9.69□□□□□ -0.86
SIX4-202ENST00000554079 ARPC4-TTLL3A0A0A6YYG9 625 aa9.69□□□□□ -0.86
SIX4-202ENST00000554079 USP17L12C9JPN9 530 aa9.69□□□□□ -0.86
SIX4-202ENST00000554079 KBTBD13C9JR72 458 aa9.69□□□□□ -0.86
SIX4-202ENST00000554079 USP17L21D6R901 530 aa9.69□□□□□ -0.86
SIX4-202ENST00000554079 CTDSP2O14595 271 aa9.69□□□□□ -0.86
SIX4-202ENST00000554079 BET1O15155 118 aa9.69□□□□□ -0.86
SIX4-202ENST00000554079 AXIN1O15169 862 aa9.69□□□□□ -0.86
SIX4-202ENST00000554079 CFLARO15519 480 aa9.69□□□□□ -0.86
SIX4-202ENST00000554079 PROSCO94903 275 aa9.69□□□□□ -0.86
SIX4-202ENST00000554079 CLIC3O95833 236 aa9.69□□□□□ -0.86
SIX4-202ENST00000554079 TOP3BO95985 862 aaKnown RBP9.69□□□□□ -0.86
SIX4-202ENST00000554079 ITGAVP06756 1048 aa9.69□□□□□ -0.86
SIX4-202ENST00000554079 BMP1P13497 986 aa9.69□□□□□ -0.86
SIX4-202ENST00000554079 ENO3P13929 434 aaPredicted RBP9.69□□□□□ -0.86
SIX4-202ENST00000554079 MLLT3P42568 568 aaPredicted RBP9.69□□□□□ -0.86
SIX4-202ENST00000554079 SRP54P61011 504 aaKnown RBP9.69□□□□□ -0.86
SIX4-202ENST00000554079 RPL10AP62906 217 aaKnown RBP9.69□□□□□ -0.86
SIX4-202ENST00000554079 SLC12A1Q13621 1099 aa9.69□□□□□ -0.86
SIX4-202ENST00000554079 CEP55Q53EZ4 464 aa9.69□□□□□ -0.86
SIX4-202ENST00000554079 CATSPEREQ5SY80 951 aa9.69□□□□□ -0.86
SIX4-202ENST00000554079 RINT1Q6NUQ1 792 aa9.69□□□□□ -0.86
SIX4-202ENST00000554079 EPGNQ6UW88 154 aa9.69□□□□□ -0.86
SIX4-202ENST00000554079 SLC47A2Q86VL8 602 aa9.69□□□□□ -0.86
SIX4-202ENST00000554079 RHOT1Q8IXI2 618 aa9.69□□□□□ -0.86
SIX4-202ENST00000554079 ANKRD53Q8N9V6 530 aa9.69□□□□□ -0.86
SIX4-202ENST00000554079 PIK3C3Q8NEB9 887 aa9.69□□□□□ -0.86
SIX4-202ENST00000554079 IL17RDQ8NFM7 739 aa9.69□□□□□ -0.86
SIX4-202ENST00000554079 SEPT8Q92599 483 aa9.69□□□□□ -0.86
SIX4-202ENST00000554079 NKD2Q969F2 451 aaPredicted RBP9.69□□□□□ -0.86
SIX4-202ENST00000554079 TOP1MTQ969P6 601 aa9.69□□□□□ -0.86
SIX4-202ENST00000554079 SLC10A4Q96EP9 437 aa9.69□□□□□ -0.86
SIX4-202ENST00000554079 REXO5Q96IC2 774 aaKnown RBP9.69□□□□□ -0.86
SIX4-202ENST00000554079 HEXIM2Q96MH2 286 aaKnown RBP9.69□□□□□ -0.86
SIX4-202ENST00000554079 IDI2Q9BXS1 227 aa9.69□□□□□ -0.86
SIX4-202ENST00000554079 C2orf40Q9H1Z8 148 aa9.69□□□□□ -0.86
SIX4-202ENST00000554079 PDZD7Q9H5P4 517 aa9.69□□□□□ -0.86
SIX4-202ENST00000554079 BCAS3Q9H6U6 928 aa9.69□□□□□ -0.86
SIX4-202ENST00000554079 HOMER2Q9NSB8 354 aa9.69□□□□□ -0.86
SIX4-202ENST00000554079 ACOXLQ9NUZ1 547 aa9.69□□□□□ -0.86
SIX4-202ENST00000554079 TMEM216Q9P0N5 145 aa9.69□□□□□ -0.86
SIX4-202ENST00000554079 EMCNQ9ULC0 261 aa9.69□□□□□ -0.86
SIX4-202ENST00000554079 UBE4BO95155 1302 aa9.69□□□□□ -0.86
SIX4-202ENST00000554079 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.68□□□□□ -0.86
SIX4-202ENST00000554079 FAM25AB3EWG3 89 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 FAM25CB3EWG5 89 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 FAM25GB3EWG6 89 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 PDHXO00330 501 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 RAD51BO15315 384 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 SYNCRIPO60506 623 aaKnown RBP9.68□□□□□ -0.86
SIX4-202ENST00000554079 USP12O75317 370 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 KRT37O76014 449 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 DLGAP3O95886 979 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 PTTG1O95997 202 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 SERPINE1P05121 402 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 TMEM191BP0C7N4 346 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 DBTP11182 482 aaKnown RBP9.68□□□□□ -0.86
SIX4-202ENST00000554079 AKR1B1P15121 316 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 MX2P20592 715 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 ELK3P41970 407 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 GABRB2P47870 512 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 PSMD8P48556 350 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 HARS2P49590 506 aaKnown RBP9.68□□□□□ -0.86
SIX4-202ENST00000554079 NDST1P52848 882 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 PPP5CP53041 499 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 MTM1Q13496 603 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 BMPR2Q13873 1038 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 CTF1Q16619 201 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 HIST2H2ACQ16777 129 aaPredicted RBP9.68□□□□□ -0.86
SIX4-202ENST00000554079 ZFP69Q49AA0 526 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 SLC9B1Q4ZJI4 515 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 EPC2Q52LR7 807 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 PAGE2BQ5JRK9 111 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 FAXCQ5TGI0 409 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 CRTC3Q6UUV7 619 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 DGLUCYQ7Z3D6 616 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 C12orf56Q8IXR9 622 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 OFCC1Q8IZS5 231 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 LGI2Q8N0V4 545 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 LILRB2Q8N423 598 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 CBR4Q8N4T8 237 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 TMEM35BQ8NCS4 154 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 RP9Q8TA86 221 aaKnown RBP9.68□□□□□ -0.86
SIX4-202ENST00000554079 PIK3R3Q92569 461 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 MARK4Q96L34 752 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 MCMBPQ9BTE3 642 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 FUNDC2Q9BWH2 189 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 ZNF385DQ9H6B1 395 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 DIABLOQ9NR28 239 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 DMAC2Q9NW81 257 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 VPS4AQ9UN37 437 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 WBP11Q9Y2W2 641 aaKnown RBP9.68□□□□□ -0.86
SIX4-202ENST00000554079 HCN4Q9Y3Q4 1203 aa9.68□□□□□ -0.86
SIX4-202ENST00000554079 DDX60LQ5H9U9 1706 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms