RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 C22orf39Q6P5X5 142 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 STRADAQ7RTN6 431 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 KANSL1Q7Z3B3 1105 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 PLPP6Q8IY26 295 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 CACTIN-AS1Q8N1I8 211 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 PCDH20Q8N6Y1 951 aaKnown RBP6.76□□□□□ -1.33
SLIRP-203ENST00000554074 ATP11CQ8NB49 1132 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 TMEM145Q8NBT3 493 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 TSC1Q92574 1164 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 ISG20Q96AZ6 181 aaKnown RBP6.76□□□□□ -1.33
SLIRP-203ENST00000554074 PPP1R16AQ96I34 528 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 HDAC8Q9BY41 377 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 ZYG11BQ9C0D3 744 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 OSBPL2Q9H1P3 480 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 MPP6Q9NZW5 540 aa6.76□□□□□ -1.33
SLIRP-203ENST00000554074 COL27A1Q8IZC6 1860 aaPredicted RBP6.75□□□□□ -1.33
SLIRP-203ENST00000554074 PTPRQQ9UMZ3 2332 aa6.75□□□□□ -1.33
SLIRP-203ENST00000554074 A0A0D9SEW6 157 aa6.75□□□□□ -1.33
SLIRP-203ENST00000554074 C2CD4BA6NLJ0 364 aa6.75□□□□□ -1.33
SLIRP-203ENST00000554074 GOLGA8SH3BPF8 625 aa6.75□□□□□ -1.33
SLIRP-203ENST00000554074 PLK4O00444 970 aa6.75□□□□□ -1.33
SLIRP-203ENST00000554074 SMAD6O43541 496 aaKnown RBP6.75□□□□□ -1.33
SLIRP-203ENST00000554074 AP1G1O43747 822 aa6.75□□□□□ -1.33
SLIRP-203ENST00000554074 ZNF821O75541 412 aaPredicted RBP6.75□□□□□ -1.33
SLIRP-203ENST00000554074 RFPL3O75679 317 aa6.75□□□□□ -1.33
SLIRP-203ENST00000554074 GFPT2O94808 682 aa6.75□□□□□ -1.33
SLIRP-203ENST00000554074 LDOC1O95751 146 aaPredicted RBP6.75□□□□□ -1.33
SLIRP-203ENST00000554074 UNGP13051 313 aaPredicted RBP6.75□□□□□ -1.33
SLIRP-203ENST00000554074 RHOQP17081 205 aa6.75□□□□□ -1.33
SLIRP-203ENST00000554074 CHRNB2P17787 502 aa6.75□□□□□ -1.33
SLIRP-203ENST00000554074 HNRNPA2B1P22626 353 aaKnown RBP6.75□□□□□ -1.33
SLIRP-203ENST00000554074 RRM1P23921 792 aa6.75□□□□□ -1.33
SLIRP-203ENST00000554074 ITGB7P26010 798 aa6.75□□□□□ -1.33
SLIRP-203ENST00000554074 SDC4P31431 198 aa6.75□□□□□ -1.33
SLIRP-203ENST00000554074 ADRA1BP35368 520 aa6.75□□□□□ -1.33
SLIRP-203ENST00000554074 RECQLP46063 649 aaPredicted RBP6.75□□□□□ -1.33
SLIRP-203ENST00000554074 MAPKAPK2P49137 400 aa6.75□□□□□ -1.33
SLIRP-203ENST00000554074 SERPINH1P50454 418 aaKnown RBP6.75□□□□□ -1.33
SLIRP-203ENST00000554074 GEMIN4P57678 1058 aaKnown RBP6.75□□□□□ -1.33
SLIRP-203ENST00000554074 IL9RQ01113 521 aa6.75□□□□□ -1.33
SLIRP-203ENST00000554074 FMO1Q01740 532 aa6.75□□□□□ -1.33
SLIRP-203ENST00000554074 GNA12Q03113 381 aa6.75□□□□□ -1.33
SLIRP-203ENST00000554074 STAT4Q14765 748 aa6.75□□□□□ -1.33
SLIRP-203ENST00000554074 KIF26BQ2KJY2 2108 aa6.75□□□□□ -1.33
SLIRP-203ENST00000554074 ARL13BQ3SXY8 428 aa6.75□□□□□ -1.33
SLIRP-203ENST00000554074 FKBP15Q5T1M5 1219 aa6.75□□□□□ -1.33
SLIRP-203ENST00000554074 NAA35Q5VZE5 725 aa6.75□□□□□ -1.33
SLIRP-203ENST00000554074 KIAA1161Q6NSJ0 714 aa6.75□□□□□ -1.33
SLIRP-203ENST00000554074 CAVIN1Q6NZI2 390 aaKnown RBP6.75□□□□□ -1.33
SLIRP-203ENST00000554074 ERN2Q76MJ5 926 aaKnown RBP6.75□□□□□ -1.33
SLIRP-203ENST00000554074 HORMAD1Q86X24 394 aa6.75□□□□□ -1.33
SLIRP-203ENST00000554074 FAM131BQ86XD5 332 aa6.75□□□□□ -1.33
SLIRP-203ENST00000554074 SPATS2Q86XZ4 545 aaKnown RBP6.75□□□□□ -1.33
SLIRP-203ENST00000554074 GATAD2AQ86YP4 633 aa6.75□□□□□ -1.33
SLIRP-203ENST00000554074 PDCD7Q8N8D1 485 aaKnown RBP6.75□□□□□ -1.33
SLIRP-203ENST00000554074 CPA5Q8WXQ8 436 aa6.75□□□□□ -1.33
SLIRP-203ENST00000554074 CENPIQ92674 756 aaPredicted RBP6.75□□□□□ -1.33
SLIRP-203ENST00000554074 NTAN1Q96AB6 310 aa6.75□□□□□ -1.33
SLIRP-203ENST00000554074 ARRDC3Q96B67 414 aa6.75□□□□□ -1.33
SLIRP-203ENST00000554074 IFT43Q96FT9 208 aa6.75□□□□□ -1.33
SLIRP-203ENST00000554074 KLHDC7BQ96G42 594 aa6.75□□□□□ -1.33
SLIRP-203ENST00000554074 LRIG1Q96JA1 1093 aa6.75□□□□□ -1.33
SLIRP-203ENST00000554074 CNDP2Q96KP4 475 aaKnown RBP6.75□□□□□ -1.33
SLIRP-203ENST00000554074 CFAP57Q96MR6 1250 aa6.75□□□□□ -1.33
SLIRP-203ENST00000554074 BPIFA3Q9BQP9 254 aa6.75□□□□□ -1.33
SLIRP-203ENST00000554074 SCUBE2Q9NQ36 999 aa6.75□□□□□ -1.33
SLIRP-203ENST00000554074 DYRK4Q9NR20 520 aa6.75□□□□□ -1.33
SLIRP-203ENST00000554074 TAB2Q9NYJ8 693 aa6.75□□□□□ -1.33
SLIRP-203ENST00000554074 TMEM63CQ9P1W3 806 aa6.75□□□□□ -1.33
SLIRP-203ENST00000554074 OR12D3Q9UGF7 316 aa6.75□□□□□ -1.33
SLIRP-203ENST00000554074 IL36AQ9UHA7 158 aa6.75□□□□□ -1.33
SLIRP-203ENST00000554074 SIK3Q9Y2K2 1263 aa6.75□□□□□ -1.33
SLIRP-203ENST00000554074 GPSM3Q9Y4H4 160 aa6.75□□□□□ -1.33
SLIRP-203ENST00000554074 SNX10Q9Y5X0 201 aa6.75□□□□□ -1.33
SLIRP-203ENST00000554074 ARHGEF17Q96PE2 2063 aaPredicted RBP6.75□□□□□ -1.33
SLIRP-203ENST00000554074 A0A1W2PQU0 124 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 TRABD2BA6NFA1 517 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 ZSCAN5CA6NGD5 496 aaPredicted RBP6.74□□□□□ -1.33
SLIRP-203ENST00000554074 LRRC10BA6NIK2 292 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 GOLGA8CPA6NN73 597 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 LGALS16A8MUM7 142 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 K7ERQ8 282 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 CBX4O00257 560 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 KPNA3O00505 521 aaPredicted RBP6.74□□□□□ -1.33
SLIRP-203ENST00000554074 RIOK3O14730 519 aaKnown RBP6.74□□□□□ -1.33
SLIRP-203ENST00000554074 BNIP3LO60238 219 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 SRGAP2O75044 1071 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 LEFTY1O75610 366 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 CALB1P05937 261 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 CKMT2P17540 419 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 ACP1P24666 158 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 MAT2AP31153 395 aaKnown RBP6.74□□□□□ -1.33
SLIRP-203ENST00000554074 AKT2P31751 481 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 L1CAMP32004 1257 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 HNF1BP35680 557 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 STAT1P42224 750 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 NSFP46459 744 aaKnown RBP6.74□□□□□ -1.33
SLIRP-203ENST00000554074 ACADVLP49748 655 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 NUMBP49757 651 aa6.74□□□□□ -1.33
SLIRP-203ENST00000554074 NEK3P51956 506 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms