RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 PYGMP11217 842 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 HMGA1P17096 107 aaKnown RBP5.17□□□□□ -1.58
VTI1B-202ENST00000553619 ATF6P18850 670 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 HDCP19113 662 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 DNAJB1P25685 340 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 CXCR5P32302 372 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 PTPN7P35236 360 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 GJC1P36383 396 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 NR2C2P49116 596 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 HARS2P49590 506 aaKnown RBP5.17□□□□□ -1.58
VTI1B-202ENST00000553619 CXCR3P49682 368 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 DNA2P51530 1060 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 CDR1P51861 262 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 HK2P52789 917 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 HDAC4P56524 1084 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 TAS2R40P59535 323 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 SLC25A11Q02978 314 aaKnown RBP5.17□□□□□ -1.58
VTI1B-202ENST00000553619 EFEMP1Q12805 493 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 MPP2Q14168 576 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 CCDC142Q17RM4 750 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 LRIT3Q3SXY7 679 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 SYPL2Q5VXT5 272 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 NUGGCQ68CJ6 796 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 SPATA31D4Q6ZUB0 917 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 ZNF572Q7Z3I7 529 aaPredicted RBP5.17□□□□□ -1.58
VTI1B-202ENST00000553619 BNIPLQ7Z465 357 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 SCD5Q86SK9 330 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 DDX42Q86XP3 938 aaKnown RBP eCLIP5.17□□□□□ -1.58
VTI1B-202ENST00000553619 SLC13A5Q86YT5 568 aaPredicted RBP5.17□□□□□ -1.58
VTI1B-202ENST00000553619 RFX6Q8HWS3 928 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 OXR1Q8N573 874 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 LZTR1Q8N653 840 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 TTC9BQ8N6N2 239 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 GOLM1Q8NBJ4 401 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 ATL2Q8NHH9 583 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 DNAJB8Q8NHS0 232 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 ZSCAN18Q8TBC5 510 aaPredicted RBP5.17□□□□□ -1.58
VTI1B-202ENST00000553619 GRK7Q8WTQ7 553 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 SLC22A17Q8WUG5 538 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 RNF141Q8WVD5 230 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 UBXN4Q92575 508 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 NDRG1Q92597 394 aaKnown RBP5.17□□□□□ -1.58
VTI1B-202ENST00000553619 HSPH1Q92598 858 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 HAUS1Q96CS2 278 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 BTN2A3PQ96KV6 586 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 CAPZA3Q96KX2 299 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 C1orf74Q96LT6 269 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 CCDC74BQ96LY2 380 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 RNF157Q96PX1 679 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 PSMB7Q99436 277 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 ZNF670Q9BS34 389 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 RSRP1Q9BUV0 290 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 CARD6Q9BX69 1037 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 OSBPL8Q9BZF1 889 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 TRIM7Q9C029 511 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 SMOC2Q9H3U7 446 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 GOLPH3Q9H4A6 298 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 DHX35Q9H5Z1 703 aaKnown RBP5.17□□□□□ -1.58
VTI1B-202ENST00000553619 CATSPERBQ9H7T0 1116 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 MAN1C1Q9NR34 630 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 ARHGEF38Q9NXL2 777 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 MARCH2Q9P0N8 246 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 COX16Q9P0S2 106 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 GMIPQ9P107 970 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 RASAL2Q9UJF2 1139 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 DRG1Q9Y295 367 aaKnown RBP5.17□□□□□ -1.58
VTI1B-202ENST00000553619 RAD54BQ9Y620 910 aa5.17□□□□□ -1.58
VTI1B-202ENST00000553619 MYO9BQ13459 2157 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 PATJQ8NI35 1801 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 MYO16Q9Y6X6 1858 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 TRAV19A0A0A6YYK7 116 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 CCDC195A0A1B0GUA6 201 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 SLC12A8A0AV02 714 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 TYW5A2RUC4 315 aaKnown RBP5.16□□□□□ -1.58
VTI1B-202ENST00000553619 ZNF840PA6NDX5 716 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 KCNU1A8MYU2 1149 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 NPIPB6E9PJ23 425 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 EEF2KO00418 725 aaKnown RBP5.16□□□□□ -1.58
VTI1B-202ENST00000553619 APOL1O14791 398 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 ZNF185O15231 689 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 NCAM2O15394 837 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 SOAT2O75908 522 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 LATS1O95835 1130 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 FYNP06241 537 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 MBL2P11226 248 aaPredicted RBP5.16□□□□□ -1.58
VTI1B-202ENST00000553619 MYL4P12829 197 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 HOXB8P17481 243 aaPredicted RBP5.16□□□□□ -1.58
VTI1B-202ENST00000553619 TGM2P21980 687 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 IL1R2P27930 398 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 GABRR2P28476 465 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 STIP1P31948 543 aaKnown RBP5.16□□□□□ -1.58
VTI1B-202ENST00000553619 L1CAMP32004 1257 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 CHRNA3P32297 505 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 SERPINB6P35237 376 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 ACTN2P35609 894 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 NRIP1P48552 1158 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 SLC11A2P49281 568 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 MLLT6P55198 1093 aaPredicted RBP5.16□□□□□ -1.58
VTI1B-202ENST00000553619 EGR3Q06889 387 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 SCAPQ12770 1279 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms