RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 PABPN1LA6NDY0 278 aaKnown RBP5.38□□□□□ -1.55
SCFD1-209ENST00000553280 MYO1GB0I1T2 1018 aa5.38□□□□□ -1.55
SCFD1-209ENST00000553280 BCAT2O15382 392 aaPredicted RBP5.38□□□□□ -1.55
SCFD1-209ENST00000553280 RAMP2O60895 175 aa5.38□□□□□ -1.55
SCFD1-209ENST00000553280 TACC1O75410 805 aa5.38□□□□□ -1.55
SCFD1-209ENST00000553280 GCATO75600 419 aa5.38□□□□□ -1.55
SCFD1-209ENST00000553280 GALTP07902 379 aa5.38□□□□□ -1.55
SCFD1-209ENST00000553280 FCGR2AP12318 317 aa5.38□□□□□ -1.55
SCFD1-209ENST00000553280 RARGP13631 454 aa5.38□□□□□ -1.55
SCFD1-209ENST00000553280 ZNF8P17098 575 aaPredicted RBP5.38□□□□□ -1.55
SCFD1-209ENST00000553280 FMO4P31512 558 aa5.38□□□□□ -1.55
SCFD1-209ENST00000553280 BLKP51451 505 aa5.38□□□□□ -1.55
SCFD1-209ENST00000553280 OLR1P78380 273 aa5.38□□□□□ -1.55
SCFD1-209ENST00000553280 IFI35P80217 286 aaPredicted RBP5.38□□□□□ -1.55
SCFD1-209ENST00000553280 RHAGQ02094 409 aa5.38□□□□□ -1.55
SCFD1-209ENST00000553280 ZBTB16Q05516 673 aa5.38□□□□□ -1.55
SCFD1-209ENST00000553280 ZNF169Q14929 603 aaPredicted RBP5.38□□□□□ -1.55
SCFD1-209ENST00000553280 MED22Q15528 200 aa5.38□□□□□ -1.55
SCFD1-209ENST00000553280 SMN1Q16637 294 aaKnown RBP5.38□□□□□ -1.55
SCFD1-209ENST00000553280 FAM153CQ494X1 144 aa5.38□□□□□ -1.55
SCFD1-209ENST00000553280 PLK5Q496M5 336 aa5.38□□□□□ -1.55
SCFD1-209ENST00000553280 ZKSCAN2Q63HK3 967 aa5.38□□□□□ -1.55
SCFD1-209ENST00000553280 TTI2Q6NXR4 508 aa5.38□□□□□ -1.55
SCFD1-209ENST00000553280 CEP85Q6P2H3 762 aa5.38□□□□□ -1.55
SCFD1-209ENST00000553280 CYP20A1Q6UW02 462 aa5.38□□□□□ -1.55
SCFD1-209ENST00000553280 DHRS13Q6UX07 377 aa5.38□□□□□ -1.55
SCFD1-209ENST00000553280 Q6ZPA2 131 aa5.38□□□□□ -1.55
SCFD1-209ENST00000553280 PRSS45Q7RTY3 260 aa5.38□□□□□ -1.55
SCFD1-209ENST00000553280 SLC46A3Q7Z3Q1 461 aa5.38□□□□□ -1.55
SCFD1-209ENST00000553280 TADA2BQ86TJ2 420 aa5.38□□□□□ -1.55
SCFD1-209ENST00000553280 PAQR4Q8N4S7 273 aaPredicted RBP5.38□□□□□ -1.55
SCFD1-209ENST00000553280 SRBD1Q8N5C6 995 aaKnown RBP5.38□□□□□ -1.55
SCFD1-209ENST00000553280 OR52N4Q8NGI2 321 aa5.38□□□□□ -1.55
SCFD1-209ENST00000553280 NEK9Q8TD19 979 aa5.38□□□□□ -1.55
SCFD1-209ENST00000553280 INTS12Q96CB8 462 aaKnown RBP5.38□□□□□ -1.55
SCFD1-209ENST00000553280 CALML4Q96GE6 196 aa5.38□□□□□ -1.55
SCFD1-209ENST00000553280 MAP7D2Q96T17 732 aa5.38□□□□□ -1.55
SCFD1-209ENST00000553280 FTOQ9C0B1 505 aaKnown RBP eCLIP5.38□□□□□ -1.55
SCFD1-209ENST00000553280 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.38□□□□□ -1.55
SCFD1-209ENST00000553280 PCDHGB4Q9UN71 923 aa5.38□□□□□ -1.55
SCFD1-209ENST00000553280 DHDHQ9UQ10 334 aa5.38□□□□□ -1.55
SCFD1-209ENST00000553280 EMSYQ7Z589 1322 aa5.38□□□□□ -1.55
SCFD1-209ENST00000553280 FAM237BA0A1B0GVD1 139 aa5.37□□□□□ -1.55
SCFD1-209ENST00000553280 TCRBV7S3A2A0A539 114 aa5.37□□□□□ -1.55
SCFD1-209ENST00000553280 GJB3O75712 270 aa5.37□□□□□ -1.55
SCFD1-209ENST00000553280 PGM3O95394 542 aa5.37□□□□□ -1.55
SCFD1-209ENST00000553280 ADAP00813 363 aa5.37□□□□□ -1.55
SCFD1-209ENST00000553280 SERPINC1P01008 464 aa5.37□□□□□ -1.55
SCFD1-209ENST00000553280 ADRB2P07550 413 aa5.37□□□□□ -1.55
SCFD1-209ENST00000553280 PBX3P40426 434 aa5.37□□□□□ -1.55
SCFD1-209ENST00000553280 SKIV2L2P42285 1042 aaKnown RBP5.37□□□□□ -1.55
SCFD1-209ENST00000553280 PTPN9P43378 593 aa5.37□□□□□ -1.55
SCFD1-209ENST00000553280 INHBEP58166 350 aa5.37□□□□□ -1.55
SCFD1-209ENST00000553280 CRYMQ14894 314 aa5.37□□□□□ -1.55
SCFD1-209ENST00000553280 KPNB1Q14974 876 aaKnown RBP5.37□□□□□ -1.55
SCFD1-209ENST00000553280 RPE65Q16518 533 aa5.37□□□□□ -1.55
SCFD1-209ENST00000553280 C10orf76Q5T2E6 689 aa5.37□□□□□ -1.55
SCFD1-209ENST00000553280 ATG9BQ674R7 924 aa5.37□□□□□ -1.55
SCFD1-209ENST00000553280 IL20RBQ6UXL0 311 aa5.37□□□□□ -1.55
SCFD1-209ENST00000553280 RASAL3Q86YV0 1011 aa5.37□□□□□ -1.55
SCFD1-209ENST00000553280 KLBQ86Z14 1044 aa5.37□□□□□ -1.55
SCFD1-209ENST00000553280 RHPN2Q8IUC4 686 aa5.37□□□□□ -1.55
SCFD1-209ENST00000553280 GHDCQ8N2G8 530 aa5.37□□□□□ -1.55
SCFD1-209ENST00000553280 FRMD1Q8N878 549 aa5.37□□□□□ -1.55
SCFD1-209ENST00000553280 TMEM116Q8NCL8 245 aa5.37□□□□□ -1.55
SCFD1-209ENST00000553280 CADM4Q8NFZ8 388 aa5.37□□□□□ -1.55
SCFD1-209ENST00000553280 FAM149B1Q96BN6 582 aa5.37□□□□□ -1.55
SCFD1-209ENST00000553280 ZNF764Q96H86 408 aaPredicted RBP5.37□□□□□ -1.55
SCFD1-209ENST00000553280 SLF1Q9BQI6 1058 aa5.37□□□□□ -1.55
SCFD1-209ENST00000553280 HEMGNQ9BXL5 484 aa5.37□□□□□ -1.55
SCFD1-209ENST00000553280 ATP8A2Q9NTI2 1148 aa5.37□□□□□ -1.55
SCFD1-209ENST00000553280 C20orf141Q9NUB4 165 aa5.37□□□□□ -1.55
SCFD1-209ENST00000553280 BABAM1Q9NWV8 329 aa5.37□□□□□ -1.55
SCFD1-209ENST00000553280 KIAA1456Q9P272 454 aa5.37□□□□□ -1.55
SCFD1-209ENST00000553280 NLKQ9UBE8 527 aa5.37□□□□□ -1.55
SCFD1-209ENST00000553280 ZNF70Q9UC06 446 aaPredicted RBP5.37□□□□□ -1.55
SCFD1-209ENST00000553280 RPS6KA6Q9UK32 745 aa5.37□□□□□ -1.55
SCFD1-209ENST00000553280 DMRT1Q9Y5R6 373 aa5.37□□□□□ -1.55
SCFD1-209ENST00000553280 ARHGAP10A1A4S6 786 aa5.36□□□□□ -1.55
SCFD1-209ENST00000553280 TAF4O00268 1085 aa5.36□□□□□ -1.55
SCFD1-209ENST00000553280 BEST1O76090 585 aa5.36□□□□□ -1.55
SCFD1-209ENST00000553280 JTBO76095 146 aa5.36□□□□□ -1.55
SCFD1-209ENST00000553280 DNTTP04053 509 aa5.36□□□□□ -1.55
SCFD1-209ENST00000553280 NR2F1P10589 423 aa5.36□□□□□ -1.55
SCFD1-209ENST00000553280 AKR1A1P14550 325 aa5.36□□□□□ -1.55
SCFD1-209ENST00000553280 PPARGP37231 505 aaPredicted RBP5.36□□□□□ -1.55
SCFD1-209ENST00000553280 SOX2P48431 317 aa5.36□□□□□ -1.55
SCFD1-209ENST00000553280 RARRES1P49788 294 aa5.36□□□□□ -1.55
SCFD1-209ENST00000553280 PRAMEP78395 509 aa5.36□□□□□ -1.55
SCFD1-209ENST00000553280 STK4Q13043 487 aa5.36□□□□□ -1.55
SCFD1-209ENST00000553280 AIMP2Q13155 320 aaKnown RBP5.36□□□□□ -1.55
SCFD1-209ENST00000553280 PLEKHS1Q5SXH7 462 aa5.36□□□□□ -1.55
SCFD1-209ENST00000553280 KLHL35Q6PF15 583 aa5.36□□□□□ -1.55
SCFD1-209ENST00000553280 SERPINA13PQ6UXR4 307 aa5.36□□□□□ -1.55
SCFD1-209ENST00000553280 GRASPQ7Z6J2 395 aaPredicted RBP5.36□□□□□ -1.55
SCFD1-209ENST00000553280 TFAP2DQ7Z6R9 452 aa5.36□□□□□ -1.55
SCFD1-209ENST00000553280 VRK3Q8IV63 474 aa5.36□□□□□ -1.55
SCFD1-209ENST00000553280 ADGRF2Q8IZF7 708 aa5.36□□□□□ -1.55
SCFD1-209ENST00000553280 TAGAPQ8N103 731 aa5.36□□□□□ -1.55
SCFD1-209ENST00000553280 DNAAF1Q8NEP3 725 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms