RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 PRPSAP1Q14558 356 aa13.25□□□□□ -0.29
CACNB3-219ENST00000551544 ZNF460Q14592 562 aa13.25□□□□□ -0.29
CACNB3-219ENST00000551544 ARL13AQ5H913 290 aaPredicted RBP13.25□□□□□ -0.29
CACNB3-219ENST00000551544 C9orf131Q5VYM1 1079 aa13.25□□□□□ -0.29
CACNB3-219ENST00000551544 OLFML2BQ68BL8 750 aa13.25□□□□□ -0.29
CACNB3-219ENST00000551544 NXNQ6DKJ4 435 aa13.25□□□□□ -0.29
CACNB3-219ENST00000551544 ARHGAP36Q6ZRI8 547 aa13.25□□□□□ -0.29
CACNB3-219ENST00000551544 SNX32Q86XE0 403 aa13.25□□□□□ -0.29
CACNB3-219ENST00000551544 PDSS2Q86YH6 399 aa13.25□□□□□ -0.29
CACNB3-219ENST00000551544 SPATA6LQ8N4H0 392 aa13.25□□□□□ -0.29
CACNB3-219ENST00000551544 JADE3Q92613 823 aa13.25□□□□□ -0.29
CACNB3-219ENST00000551544 GAD1Q99259 594 aa13.25□□□□□ -0.29
CACNB3-219ENST00000551544 SLC4A7Q9Y6M7 1214 aa13.25□□□□□ -0.29
CACNB3-219ENST00000551544 SBF1O95248 1867 aa13.25□□□□□ -0.29
CACNB3-219ENST00000551544 MT-CYBP00156 380 aaPredicted RBP13.25□□□□□ -0.29
CACNB3-219ENST00000551544 GLDCP23378 1020 aa13.25□□□□□ -0.29
CACNB3-219ENST00000551544 PIK3R1P27986 724 aa13.25□□□□□ -0.29
CACNB3-219ENST00000551544 CLCNKBP51801 687 aa13.25□□□□□ -0.29
CACNB3-219ENST00000551544 CRYBB1P53674 252 aaPredicted RBP13.25□□□□□ -0.29
CACNB3-219ENST00000551544 AQP4P55087 323 aa13.25□□□□□ -0.29
CACNB3-219ENST00000551544 ADAM17P78536 824 aa13.25□□□□□ -0.29
CACNB3-219ENST00000551544 LAMB3Q13751 1172 aa13.25□□□□□ -0.29
CACNB3-219ENST00000551544 POU6F1Q14863 301 aa13.25□□□□□ -0.29
CACNB3-219ENST00000551544 LSM12Q3MHD2 195 aaKnown RBP13.25□□□□□ -0.29
CACNB3-219ENST00000551544 SEL1L3Q68CR1 1132 aa13.25□□□□□ -0.29
CACNB3-219ENST00000551544 NAPEPLDQ6IQ20 393 aa13.25□□□□□ -0.29
CACNB3-219ENST00000551544 ZC3HC1Q86WB0 502 aaKnown RBP13.25□□□□□ -0.29
CACNB3-219ENST00000551544 SLC41A1Q8IVJ1 513 aa13.25□□□□□ -0.29
CACNB3-219ENST00000551544 CNTD1Q8N815 330 aa13.25□□□□□ -0.29
CACNB3-219ENST00000551544 TSPAN18Q96SJ8 248 aa13.25□□□□□ -0.29
CACNB3-219ENST00000551544 RTKNQ9BST9 563 aa13.25□□□□□ -0.29
CACNB3-219ENST00000551544 KLHL4Q9C0H6 718 aa13.25□□□□□ -0.29
CACNB3-219ENST00000551544 BRD8Q9H0E9 1235 aa13.25□□□□□ -0.29
CACNB3-219ENST00000551544 TRIP12Q14669 1992 aaPredicted RBP13.25□□□□□ -0.29
CACNB3-219ENST00000551544 PDCD11Q14690 1871 aaKnown RBP13.24□□□□□ -0.29
CACNB3-219ENST00000551544 C9IYK1 514 aa13.24□□□□□ -0.29
CACNB3-219ENST00000551544 MATN2O00339 956 aa13.24□□□□□ -0.29
CACNB3-219ENST00000551544 PRDX6P30041 224 aa13.24□□□□□ -0.29
CACNB3-219ENST00000551544 RPL14P50914 215 aaKnown RBP13.24□□□□□ -0.29
CACNB3-219ENST00000551544 MTTPP55157 894 aa13.24□□□□□ -0.29
CACNB3-219ENST00000551544 GJA9P57773 515 aa13.24□□□□□ -0.29
CACNB3-219ENST00000551544 CTBP1Q13363 440 aa13.24□□□□□ -0.29
CACNB3-219ENST00000551544 LIPMQ5VYY2 423 aa13.24□□□□□ -0.29
CACNB3-219ENST00000551544 METTL21CQ5VZV1 264 aa13.24□□□□□ -0.29
CACNB3-219ENST00000551544 ZYG11AQ6WRX3 759 aa13.24□□□□□ -0.29
CACNB3-219ENST00000551544 DENND6AQ8IWF6 608 aa13.24□□□□□ -0.29
CACNB3-219ENST00000551544 IPMKQ8NFU5 416 aa13.24□□□□□ -0.29
CACNB3-219ENST00000551544 ZC3H15Q8WU90 426 aaKnown RBP13.24□□□□□ -0.29
CACNB3-219ENST00000551544 LPPQ93052 612 aa13.24□□□□□ -0.29
CACNB3-219ENST00000551544 MARK4Q96L34 752 aa13.24□□□□□ -0.29
CACNB3-219ENST00000551544 VAT1Q99536 393 aa13.24□□□□□ -0.29
CACNB3-219ENST00000551544 GPR22Q99680 433 aa13.24□□□□□ -0.29
CACNB3-219ENST00000551544 GNEQ9Y223 722 aaKnown RBP13.24□□□□□ -0.29
CACNB3-219ENST00000551544 RAP2CQ9Y3L5 183 aa13.24□□□□□ -0.29
CACNB3-219ENST00000551544 PDLIM1O00151 329 aa13.24□□□□□ -0.29
CACNB3-219ENST00000551544 HDAC3O15379 428 aa13.24□□□□□ -0.29
CACNB3-219ENST00000551544 H2AFYO75367 372 aaKnown RBP13.24□□□□□ -0.29
CACNB3-219ENST00000551544 AHSGP02765 367 aa13.24□□□□□ -0.29
CACNB3-219ENST00000551544 SBK3P0C264 359 aa13.24□□□□□ -0.29
CACNB3-219ENST00000551544 TFEBP19484 476 aa13.24□□□□□ -0.29
CACNB3-219ENST00000551544 GSTT1P30711 240 aa13.24□□□□□ -0.29
CACNB3-219ENST00000551544 MSX2P35548 267 aaPredicted RBP13.24□□□□□ -0.29
CACNB3-219ENST00000551544 MPP1Q00013 466 aa13.24□□□□□ -0.29
CACNB3-219ENST00000551544 FRG1Q14331 258 aaKnown RBP13.24□□□□□ -0.29
CACNB3-219ENST00000551544 GRAMD1BQ3KR37 738 aa13.24□□□□□ -0.29
CACNB3-219ENST00000551544 INTS6LQ5JSJ4 861 aaKnown RBP13.24□□□□□ -0.29
CACNB3-219ENST00000551544 TMEM198Q66K66 360 aa13.24□□□□□ -0.29
CACNB3-219ENST00000551544 KDELC2Q7Z4H8 507 aa13.24□□□□□ -0.29
CACNB3-219ENST00000551544 TAC4Q86UU9 113 aa13.24□□□□□ -0.29
CACNB3-219ENST00000551544 C3orf58Q8NDZ4 430 aa13.24□□□□□ -0.29
CACNB3-219ENST00000551544 C1QTNF1Q9BXJ1 281 aa13.24□□□□□ -0.29
CACNB3-219ENST00000551544 RHOJQ9H4E5 214 aa13.24□□□□□ -0.29
CACNB3-219ENST00000551544 ZDHHC2Q9UIJ5 367 aa13.24□□□□□ -0.29
CACNB3-219ENST00000551544 MID2Q9UJV3 735 aa13.24□□□□□ -0.29
CACNB3-219ENST00000551544 CASTOR2A6NHX0 329 aa13.23□□□□□ -0.29
CACNB3-219ENST00000551544 TXNDC9O14530 226 aa13.23□□□□□ -0.29
CACNB3-219ENST00000551544 CFLARO15519 480 aa13.23□□□□□ -0.29
CACNB3-219ENST00000551544 VAPBO95292 243 aa13.23□□□□□ -0.29
CACNB3-219ENST00000551544 F9P00740 461 aa13.23□□□□□ -0.29
CACNB3-219ENST00000551544 THRAP10827 490 aa13.23□□□□□ -0.29
CACNB3-219ENST00000551544 GABRB3P28472 473 aa13.23□□□□□ -0.29
CACNB3-219ENST00000551544 LHX1P48742 406 aa13.23□□□□□ -0.29
CACNB3-219ENST00000551544 CXCR3P49682 368 aa13.23□□□□□ -0.29
CACNB3-219ENST00000551544 MSLNQ13421 630 aaPredicted RBP13.23□□□□□ -0.29
CACNB3-219ENST00000551544 RAB41Q5JT25 222 aa13.23□□□□□ -0.29
CACNB3-219ENST00000551544 TMC7Q7Z402 723 aa13.23□□□□□ -0.29
CACNB3-219ENST00000551544 ARHGAP22Q7Z5H3 698 aa13.23□□□□□ -0.29
CACNB3-219ENST00000551544 FSTL5Q8N475 847 aaPredicted RBP13.23□□□□□ -0.29
CACNB3-219ENST00000551544 TMEM151AQ8N4L1 468 aa13.23□□□□□ -0.29
CACNB3-219ENST00000551544 CCNYL1Q8N7R7 359 aa13.23□□□□□ -0.29
CACNB3-219ENST00000551544 CATSPER2Q96P56 530 aa13.23□□□□□ -0.29
CACNB3-219ENST00000551544 MCMBPQ9BTE3 642 aa13.23□□□□□ -0.29
CACNB3-219ENST00000551544 FTHL17Q9BXU8 183 aa13.23□□□□□ -0.29
CACNB3-219ENST00000551544 DRC3Q9H069 523 aa13.23□□□□□ -0.29
CACNB3-219ENST00000551544 VCX3BQ9H321 246 aa13.23□□□□□ -0.29
CACNB3-219ENST00000551544 TBC1D30Q9Y2I9 924 aa13.23□□□□□ -0.29
CACNB3-219ENST00000551544 TSC2P49815 1807 aa13.23□□□□□ -0.29
CACNB3-219ENST00000551544 C17orf102A2RUQ5 167 aa13.23□□□□□ -0.29
CACNB3-219ENST00000551544 ZNF189O75820 626 aaPredicted RBP13.23□□□□□ -0.29
CACNB3-219ENST00000551544 JUNP05412 331 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms