RNA–Protein interactions for RNA: ENST00000550077.1

AC055716.1-201, humanhuman

BASIC

Gene AC055716.1, Length 495 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.1-201ENST00000550077 JUNDP17535 347 aa8.87□□□□□ -0.99
AC055716.1-201ENST00000550077 TRIM21P19474 475 aaKnown RBP8.87□□□□□ -0.99
AC055716.1-201ENST00000550077 CMA1P23946 247 aa8.87□□□□□ -0.99
AC055716.1-201ENST00000550077 AKT2P31751 481 aa8.87□□□□□ -0.99
AC055716.1-201ENST00000550077 NUDT1P36639 197 aa8.87□□□□□ -0.99
AC055716.1-201ENST00000550077 ME1P48163 572 aa8.87□□□□□ -0.99
AC055716.1-201ENST00000550077 PLK1P53350 603 aa8.87□□□□□ -0.99
AC055716.1-201ENST00000550077 ADKP55263 362 aaKnown RBP8.87□□□□□ -0.99
AC055716.1-201ENST00000550077 CCL7P80098 99 aa8.87□□□□□ -0.99
AC055716.1-201ENST00000550077 TYRO3Q06418 890 aa8.87□□□□□ -0.99
AC055716.1-201ENST00000550077 MAPK8IP2Q13387 824 aaPredicted RBP8.87□□□□□ -0.99
AC055716.1-201ENST00000550077 NR0B2Q15466 257 aa8.87□□□□□ -0.99
AC055716.1-201ENST00000550077 CBWD6Q4V339 395 aa8.87□□□□□ -0.99
AC055716.1-201ENST00000550077 CBWD3Q5JTY5 395 aa8.87□□□□□ -0.99
AC055716.1-201ENST00000550077 CBWD5Q5RIA9 395 aa8.87□□□□□ -0.99
AC055716.1-201ENST00000550077 RAB11FIP2Q7L804 512 aa8.87□□□□□ -0.99
AC055716.1-201ENST00000550077 TMPRSS9Q7Z410 1059 aa8.87□□□□□ -0.99
AC055716.1-201ENST00000550077 CHSY1Q86X52 802 aa8.87□□□□□ -0.99
AC055716.1-201ENST00000550077 SCML4Q8N228 414 aa8.87□□□□□ -0.99
AC055716.1-201ENST00000550077 SH2D3CQ8N5H7 860 aa8.87□□□□□ -0.99
AC055716.1-201ENST00000550077 OR2A12Q8NGT7 310 aa8.87□□□□□ -0.99
AC055716.1-201ENST00000550077 GOLGA5Q8TBA6 731 aa8.87□□□□□ -0.99
AC055716.1-201ENST00000550077 PSMB7Q99436 277 aa8.87□□□□□ -0.99
AC055716.1-201ENST00000550077 FEM1AQ9BSK4 669 aa8.87□□□□□ -0.99
AC055716.1-201ENST00000550077 DUSP23Q9BVJ7 150 aa8.87□□□□□ -0.99
AC055716.1-201ENST00000550077 IRX2Q9BZI1 471 aaPredicted RBP8.87□□□□□ -0.99
AC055716.1-201ENST00000550077 USP29Q9HBJ7 922 aa8.87□□□□□ -0.99
AC055716.1-201ENST00000550077 TMEM8AQ9HCN3 771 aa8.87□□□□□ -0.99
AC055716.1-201ENST00000550077 GEMIN8Q9NWZ8 242 aaKnown RBP8.87□□□□□ -0.99
AC055716.1-201ENST00000550077 PISDQ9UG56 409 aa8.87□□□□□ -0.99
AC055716.1-201ENST00000550077 GGT7Q9UJ14 662 aa8.87□□□□□ -0.99
AC055716.1-201ENST00000550077 SALL4Q9UJQ4 1053 aa8.87□□□□□ -0.99
AC055716.1-201ENST00000550077 TRAF3IP3Q9Y228 551 aa8.87□□□□□ -0.99
AC055716.1-201ENST00000550077 HPSEQ9Y251 543 aa8.87□□□□□ -0.99
AC055716.1-201ENST00000550077 PLAAQ9Y263 795 aa8.87□□□□□ -0.99
AC055716.1-201ENST00000550077 TLR6Q9Y2C9 796 aa8.87□□□□□ -0.99
AC055716.1-201ENST00000550077 FRMD4BQ9Y2L6 1034 aa8.87□□□□□ -0.99
AC055716.1-201ENST00000550077 A6NNZ2 444 aa8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 YY2O15391 372 aa8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 ACTN4O43707 911 aaKnown RBP8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 PPFIA2O75334 1257 aa8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 ZNF821O75541 412 aaPredicted RBP8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 TCEA3O75764 348 aa8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 ENDOD1O94919 500 aa8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 PRR29P0C7W0 189 aa8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 RRM1P23921 792 aa8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 NR2F2P24468 414 aa8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 BRD2P25440 801 aaKnown RBP8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 CHRNA3P32297 505 aa8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 ARSDP51689 593 aa8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 MCCD1P59942 119 aaPredicted RBP8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 HNRNPKP61978 463 aaKnown RBP eCLIP8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 LRMPQ12912 555 aa8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 PDE1CQ14123 709 aaPredicted RBP8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 SPIDRQ14159 915 aa8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 TAF5Q15542 800 aa8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 PRRT3Q5FWE3 981 aa8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 ARSIQ5FYB1 569 aa8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 FAM46CQ5VWP2 391 aa8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 KCTD16Q68DU8 428 aa8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 KRT39Q6A163 491 aa8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 LINGO4Q6UY18 593 aa8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 ELOA2Q8IYF1 753 aaPredicted RBP8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 FAM186BQ8IYM0 893 aa8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 FBXL13Q8NEE6 735 aa8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 ZNF564Q8TBZ8 553 aaPredicted RBP8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 GRIN3AQ8TCU5 1115 aa8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 ANP32BQ92688 251 aaKnown RBP8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 KAT5Q92993 513 aa8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 PMEPA1Q969W9 287 aa8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 FUBP1Q96AE4 644 aaKnown RBP8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 VOPP1Q96AW1 172 aa8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 IFT43Q96FT9 208 aa8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 PAGE5Q96GU1 130 aa8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 LIN37Q96GY3 246 aaPredicted RBP8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 TIGD1Q96MW7 591 aa8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 LRRC61Q9BV99 259 aa8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 SLC12A9Q9BXP2 914 aa8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 SLC17A9Q9BYT1 436 aa8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 TNKS2Q9H2K2 1166 aa8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 RAB20Q9NX57 234 aa8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 SIRPGQ9P1W8 387 aa8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 PADI4Q9UM07 663 aa8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 PCDHGA7Q9Y5G6 932 aa8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 ACTL7AQ9Y615 435 aa8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 HS3ST3A1Q9Y663 406 aa8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 CSNK1G3Q9Y6M4 447 aa8.86□□□□□ -0.99
AC055716.1-201ENST00000550077 CHD5Q8TDI0 1954 aa8.85□□□□□ -0.99
AC055716.1-201ENST00000550077 C9orf172C9J069 976 aa8.85□□□□□ -0.99
AC055716.1-201ENST00000550077 C1QTNF3-AMACRE9PGA6 284 aa8.85□□□□□ -0.99
AC055716.1-201ENST00000550077 MAPK13O15264 365 aa8.85□□□□□ -0.99
AC055716.1-201ENST00000550077 CUTAO60888 179 aa8.85□□□□□ -0.99
AC055716.1-201ENST00000550077 CNTN5O94779 1100 aa8.85□□□□□ -0.99
AC055716.1-201ENST00000550077 RNF224P0DH78 156 aa8.85□□□□□ -0.99
AC055716.1-201ENST00000550077 LIPCP11150 499 aa8.85□□□□□ -0.99
AC055716.1-201ENST00000550077 TSHRP16473 764 aa8.85□□□□□ -0.99
AC055716.1-201ENST00000550077 NNMTP40261 264 aa8.85□□□□□ -0.99
AC055716.1-201ENST00000550077 SLC8A3P57103 927 aa8.85□□□□□ -0.99
AC055716.1-201ENST00000550077 EIF4EBP2Q13542 120 aaPredicted RBP8.85□□□□□ -0.99
AC055716.1-201ENST00000550077 CUL2Q13617 745 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms