RNA–Protein interactions for RNA: ENST00000545210.5

TMEM258-208, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-208ENST00000545210 GPR27Q9NS67 375 aa11.77□□□□□ -0.53
TMEM258-208ENST00000545210 NCKIPSDQ9NZQ3 722 aa11.77□□□□□ -0.53
TMEM258-208ENST00000545210 ARMCX3Q9UH62 379 aaPredicted RBP11.77□□□□□ -0.53
TMEM258-208ENST00000545210 VANGL2Q9ULK5 521 aa11.77□□□□□ -0.53
TMEM258-208ENST00000545210 HS3ST2Q9Y278 367 aa11.77□□□□□ -0.53
TMEM258-208ENST00000545210 CSNK1G3Q9Y6M4 447 aa11.77□□□□□ -0.53
TMEM258-208ENST00000545210 LRP4O75096 1905 aa11.76□□□□□ -0.53
TMEM258-208ENST00000545210 LRRK1Q38SD2 2015 aa11.76□□□□□ -0.53
TMEM258-208ENST00000545210 EME2A4GXA9 379 aaPredicted RBP11.76□□□□□ -0.53
TMEM258-208ENST00000545210 E5RJQ4 531 aa11.76□□□□□ -0.53
TMEM258-208ENST00000545210 H3BM21 787 aa11.76□□□□□ -0.53
TMEM258-208ENST00000545210 RAD51BO15315 384 aa11.76□□□□□ -0.53
TMEM258-208ENST00000545210 SMAD6O43541 496 aaKnown RBP11.76□□□□□ -0.53
TMEM258-208ENST00000545210 SNAP91O60641 907 aa11.76□□□□□ -0.53
TMEM258-208ENST00000545210 TCEA3O75764 348 aa11.76□□□□□ -0.53
TMEM258-208ENST00000545210 PAK4O96013 591 aaPredicted RBP11.76□□□□□ -0.53
TMEM258-208ENST00000545210 SLC2A3P11169 496 aa11.76□□□□□ -0.53
TMEM258-208ENST00000545210 RRM1P23921 792 aa11.76□□□□□ -0.53
TMEM258-208ENST00000545210 CCR1P32246 355 aa11.76□□□□□ -0.53
TMEM258-208ENST00000545210 GGCXP38435 758 aa11.76□□□□□ -0.53
TMEM258-208ENST00000545210 PRCPP42785 496 aa11.76□□□□□ -0.53
TMEM258-208ENST00000545210 ACADSBP45954 432 aa11.76□□□□□ -0.53
TMEM258-208ENST00000545210 FMO5P49326 533 aa11.76□□□□□ -0.53
TMEM258-208ENST00000545210 PDX1P52945 283 aa11.76□□□□□ -0.53
TMEM258-208ENST00000545210 PMS1P54277 932 aaKnown RBP11.76□□□□□ -0.53
TMEM258-208ENST00000545210 AUHQ13825 339 aaKnown RBP11.76□□□□□ -0.53
TMEM258-208ENST00000545210 FGL2Q14314 439 aa11.76□□□□□ -0.53
TMEM258-208ENST00000545210 NR0B2Q15466 257 aa11.76□□□□□ -0.53
TMEM258-208ENST00000545210 ARSIQ5FYB1 569 aa11.76□□□□□ -0.53
TMEM258-208ENST00000545210 ANKRD40Q6AI12 368 aa11.76□□□□□ -0.53
TMEM258-208ENST00000545210 KYAT3Q6YP21 454 aaKnown RBP11.76□□□□□ -0.53
TMEM258-208ENST00000545210 ERN2Q76MJ5 926 aaKnown RBP11.76□□□□□ -0.53
TMEM258-208ENST00000545210 RRAGAQ7L523 313 aa11.76□□□□□ -0.53
TMEM258-208ENST00000545210 LURAP1LQ8IV03 231 aa11.76□□□□□ -0.53
TMEM258-208ENST00000545210 CHST14Q8NCH0 376 aa11.76□□□□□ -0.53
TMEM258-208ENST00000545210 TPCN2Q8NHX9 752 aa11.76□□□□□ -0.53
TMEM258-208ENST00000545210 FAM174AQ8TBP5 190 aa11.76□□□□□ -0.53
TMEM258-208ENST00000545210 LMX1AQ8TE12 382 aa11.76□□□□□ -0.53
TMEM258-208ENST00000545210 CCDC114Q96M63 670 aa11.76□□□□□ -0.53
TMEM258-208ENST00000545210 IL12RB2Q99665 862 aa11.76□□□□□ -0.53
TMEM258-208ENST00000545210 SLC4A5Q9BY07 1137 aa11.76□□□□□ -0.53
TMEM258-208ENST00000545210 SLC17A9Q9BYT1 436 aa11.76□□□□□ -0.53
TMEM258-208ENST00000545210 THAP9Q9H5L6 903 aa11.76□□□□□ -0.53
TMEM258-208ENST00000545210 DDIT4Q9NX09 232 aa11.76□□□□□ -0.53
TMEM258-208ENST00000545210 IPO11Q9UI26 975 aaKnown RBP11.76□□□□□ -0.53
TMEM258-208ENST00000545210 SALL4Q9UJQ4 1053 aa11.76□□□□□ -0.53
TMEM258-208ENST00000545210 ATXN7L1Q9ULK2 861 aaPredicted RBP11.76□□□□□ -0.53
TMEM258-208ENST00000545210 HS3ST3A1Q9Y663 406 aa11.76□□□□□ -0.53
TMEM258-208ENST00000545210 DOPEY2Q9Y3R5 2298 aa11.76□□□□□ -0.53
TMEM258-208ENST00000545210 UTP20O75691 2785 aaKnown RBP11.75□□□□□ -0.53
TMEM258-208ENST00000545210 CCDC187A0A096LP49 1063 aa11.75□□□□□ -0.53
TMEM258-208ENST00000545210 FAM237AA0A1B0GTK4 181 aa11.75□□□□□ -0.53
TMEM258-208ENST00000545210 TERTO14746 1132 aaKnown RBP11.75□□□□□ -0.53
TMEM258-208ENST00000545210 CLDN11O75508 207 aa11.75□□□□□ -0.53
TMEM258-208ENST00000545210 ENDOD1O94919 500 aa11.75□□□□□ -0.53
TMEM258-208ENST00000545210 PRNPP04156 253 aa11.75□□□□□ -0.53
TMEM258-208ENST00000545210 ITGA2BP08514 1039 aa11.75□□□□□ -0.53
TMEM258-208ENST00000545210 JUNDP17535 347 aa11.75□□□□□ -0.53
TMEM258-208ENST00000545210 MLLT3P42568 568 aaPredicted RBP11.75□□□□□ -0.53
TMEM258-208ENST00000545210 RPS21P63220 83 aaKnown RBP11.75□□□□□ -0.53
TMEM258-208ENST00000545210 KRT83P78385 493 aa11.75□□□□□ -0.53
TMEM258-208ENST00000545210 FKBP3Q00688 224 aaKnown RBP11.75□□□□□ -0.53
TMEM258-208ENST00000545210 PDE1CQ14123 709 aaPredicted RBP11.75□□□□□ -0.53
TMEM258-208ENST00000545210 COLEC12Q5KU26 742 aa11.75□□□□□ -0.53
TMEM258-208ENST00000545210 TPRG1LQ5T0D9 272 aa11.75□□□□□ -0.53
TMEM258-208ENST00000545210 LINGO4Q6UY18 593 aa11.75□□□□□ -0.53
TMEM258-208ENST00000545210 USP53Q70EK8 1073 aa11.75□□□□□ -0.53
TMEM258-208ENST00000545210 ARHGEF19Q8IW93 802 aa11.75□□□□□ -0.53
TMEM258-208ENST00000545210 EXTL1Q92935 676 aa11.75□□□□□ -0.53
TMEM258-208ENST00000545210 SPATA32Q96LK8 384 aa11.75□□□□□ -0.53
TMEM258-208ENST00000545210 MED15Q96RN5 788 aa11.75□□□□□ -0.53
TMEM258-208ENST00000545210 PSMB7Q99436 277 aa11.75□□□□□ -0.53
TMEM258-208ENST00000545210 TSG101Q99816 390 aa11.75□□□□□ -0.53
TMEM258-208ENST00000545210 ARHGAP9Q9BRR9 750 aa11.75□□□□□ -0.53
TMEM258-208ENST00000545210 HDAC8Q9BY41 377 aa11.75□□□□□ -0.53
TMEM258-208ENST00000545210 TNKS2Q9H2K2 1166 aa11.75□□□□□ -0.53
TMEM258-208ENST00000545210 SYNDIG1Q9H7V2 258 aa11.75□□□□□ -0.53
TMEM258-208ENST00000545210 METTL14Q9HCE5 456 aaKnown RBP11.75□□□□□ -0.53
TMEM258-208ENST00000545210 STARD5Q9NSY2 213 aa11.75□□□□□ -0.53
TMEM258-208ENST00000545210 IL36AQ9UHA7 158 aa11.75□□□□□ -0.53
TMEM258-208ENST00000545210 VPS51Q9UID3 782 aa11.75□□□□□ -0.53
TMEM258-208ENST00000545210 TBC1D30Q9Y2I9 924 aa11.75□□□□□ -0.53
TMEM258-208ENST00000545210 TRIM49BA6NDI0 452 aa11.74□□□□□ -0.53
TMEM258-208ENST00000545210 RIOK3O14730 519 aaKnown RBP11.74□□□□□ -0.53
TMEM258-208ENST00000545210 TPP1O14773 563 aa11.74□□□□□ -0.53
TMEM258-208ENST00000545210 SPINT1O43278 529 aa11.74□□□□□ -0.53
TMEM258-208ENST00000545210 GCATO75600 419 aa11.74□□□□□ -0.53
TMEM258-208ENST00000545210 LEFTY1O75610 366 aa11.74□□□□□ -0.53
TMEM258-208ENST00000545210 CNTN5O94779 1100 aa11.74□□□□□ -0.53
TMEM258-208ENST00000545210 GJB6O95452 261 aa11.74□□□□□ -0.53
TMEM258-208ENST00000545210 FAM87AP0C7U9 286 aa11.74□□□□□ -0.53
TMEM258-208ENST00000545210 ADRB3P13945 408 aa11.74□□□□□ -0.53
TMEM258-208ENST00000545210 SLC5A2P31639 672 aa11.74□□□□□ -0.53
TMEM258-208ENST00000545210 RABIFP47224 123 aa11.74□□□□□ -0.53
TMEM258-208ENST00000545210 NEK3P51956 506 aa11.74□□□□□ -0.53
TMEM258-208ENST00000545210 CDK17Q00537 523 aa11.74□□□□□ -0.53
TMEM258-208ENST00000545210 SRSF6Q13247 344 aaKnown RBP11.74□□□□□ -0.53
TMEM258-208ENST00000545210 SPIDRQ14159 915 aa11.74□□□□□ -0.53
TMEM258-208ENST00000545210 TGIF1Q15583 401 aa11.74□□□□□ -0.53
TMEM258-208ENST00000545210 KIAA1161Q6NSJ0 714 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms