RNA–Protein interactions for RNA: ENST00000544425.2

SPDEF-202, Transcript of SAM pointed domain containing ETS transcription factor, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SPDEF, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEF-202ENST00000544425 MRM3Q9HC36 420 aaKnown RBP16.31■□□□□ 0.2
SPDEF-202ENST00000544425 CHRAC1Q9NRG0 131 aa16.31■□□□□ 0.2
SPDEF-202ENST00000544425 FGFR1OP2Q9NVK5 253 aa16.31■□□□□ 0.2
SPDEF-202ENST00000544425 PRAMEF11O60813 436 aa16.3■□□□□ 0.2
SPDEF-202ENST00000544425 CLDN11O75508 207 aa16.3■□□□□ 0.2
SPDEF-202ENST00000544425 LATS1O95835 1130 aa16.3■□□□□ 0.2
SPDEF-202ENST00000544425 FGBP02675 491 aa16.3■□□□□ 0.2
SPDEF-202ENST00000544425 F11P03951 625 aa16.3■□□□□ 0.2
SPDEF-202ENST00000544425 KLKB1P03952 638 aa16.3■□□□□ 0.2
SPDEF-202ENST00000544425 LINC00271P0C7V0 271 aa16.3■□□□□ 0.2
SPDEF-202ENST00000544425 ERVK-10P10266 1014 aa16.3■□□□□ 0.2
SPDEF-202ENST00000544425 TPH1P17752 444 aa16.3■□□□□ 0.2
SPDEF-202ENST00000544425 CRHR1P34998 444 aa16.3■□□□□ 0.2
SPDEF-202ENST00000544425 TEDDM1Q5T9Z0 273 aa16.3■□□□□ 0.2
SPDEF-202ENST00000544425 PKN3Q6P5Z2 889 aa16.3■□□□□ 0.2
SPDEF-202ENST00000544425 KDELC1Q6UW63 502 aa16.3■□□□□ 0.2
SPDEF-202ENST00000544425 TMEM150AQ86TG1 271 aa16.3■□□□□ 0.2
SPDEF-202ENST00000544425 DENND1CQ8IV53 801 aa16.3■□□□□ 0.2
SPDEF-202ENST00000544425 LRRC8CQ8TDW0 803 aa16.3■□□□□ 0.2
SPDEF-202ENST00000544425 CLP1Q92989 425 aaKnown RBP16.3■□□□□ 0.2
SPDEF-202ENST00000544425 TADA1Q96BN2 335 aa16.3■□□□□ 0.2
SPDEF-202ENST00000544425 MFSD3Q96ES6 412 aa16.3■□□□□ 0.2
SPDEF-202ENST00000544425 DDX50Q9BQ39 737 aaKnown RBP16.3■□□□□ 0.2
SPDEF-202ENST00000544425 FICDQ9BVA6 458 aa16.3■□□□□ 0.2
SPDEF-202ENST00000544425 PITPNM3Q9BZ71 974 aa16.3■□□□□ 0.2
SPDEF-202ENST00000544425 NT5MQ9NPB1 228 aa16.3■□□□□ 0.2
SPDEF-202ENST00000544425 SLC17A7Q9P2U7 560 aa16.3■□□□□ 0.2
SPDEF-202ENST00000544425 STOML2Q9UJZ1 356 aa16.3■□□□□ 0.2
SPDEF-202ENST00000544425 PLLPQ9Y342 182 aa16.3■□□□□ 0.2
SPDEF-202ENST00000544425 H3BNC9 293 aa16.29■□□□□ 0.2
SPDEF-202ENST00000544425 ADRA1DP25100 572 aa16.29■□□□□ 0.2
SPDEF-202ENST00000544425 CORO1AP31146 461 aaKnown RBP16.29■□□□□ 0.2
SPDEF-202ENST00000544425 PPIGQ13427 754 aaKnown RBP eCLIP16.29■□□□□ 0.2
SPDEF-202ENST00000544425 BMPR2Q13873 1038 aa16.29■□□□□ 0.2
SPDEF-202ENST00000544425 STXBP5Q5T5C0 1151 aa16.29■□□□□ 0.2
SPDEF-202ENST00000544425 ADGRF1Q5T601 910 aa16.29■□□□□ 0.2
SPDEF-202ENST00000544425 CHST9Q7L1S5 443 aa16.29■□□□□ 0.2
SPDEF-202ENST00000544425 RASSF3Q86WH2 238 aa16.29■□□□□ 0.2
SPDEF-202ENST00000544425 CIR1Q86X95 450 aaPredicted RBP16.29■□□□□ 0.2
SPDEF-202ENST00000544425 ZNF75CPQ92670 426 aaPredicted RBP16.29■□□□□ 0.2
SPDEF-202ENST00000544425 PABPC5Q96DU9 382 aaKnown RBP16.29■□□□□ 0.2
SPDEF-202ENST00000544425 SRPK1Q96SB4 655 aaKnown RBP16.29■□□□□ 0.2
SPDEF-202ENST00000544425 ATP13A1Q9HD20 1204 aa16.29■□□□□ 0.2
SPDEF-202ENST00000544425 GKN1Q9NS71 199 aa16.29■□□□□ 0.2
SPDEF-202ENST00000544425 TXNDC16Q9P2K2 825 aa16.29■□□□□ 0.2
SPDEF-202ENST00000544425 AGO1Q9UL18 857 aaKnown RBP16.29■□□□□ 0.2
SPDEF-202ENST00000544425 ZFP37Q9Y6Q3 630 aaPredicted RBP16.29■□□□□ 0.2
SPDEF-202ENST00000544425 C2orf78A6NCI8 922 aa16.29■□□□□ 0.2
SPDEF-202ENST00000544425 PMPCBO75439 489 aa16.29■□□□□ 0.2
SPDEF-202ENST00000544425 WNT3AP56704 352 aa16.29■□□□□ 0.2
SPDEF-202ENST00000544425 IFT88Q13099 833 aa16.29■□□□□ 0.2
SPDEF-202ENST00000544425 LBRQ14739 615 aaKnown RBP16.29■□□□□ 0.2
SPDEF-202ENST00000544425 RFWD3Q6PCD5 774 aa16.29■□□□□ 0.2
SPDEF-202ENST00000544425 ZNF354CQ86Y25 554 aa16.29■□□□□ 0.2
SPDEF-202ENST00000544425 CFAP52Q8N1V2 620 aa16.29■□□□□ 0.2
SPDEF-202ENST00000544425 KLHL5Q96PQ7 755 aa16.29■□□□□ 0.2
SPDEF-202ENST00000544425 FSD1LQ9BXM9 530 aa16.29■□□□□ 0.2
SPDEF-202ENST00000544425 IQCGQ9H095 443 aaKnown RBP16.29■□□□□ 0.2
SPDEF-202ENST00000544425 PDFQ9HBH1 243 aa16.29■□□□□ 0.2
SPDEF-202ENST00000544425 NSMCE4AQ9NXX6 385 aa16.29■□□□□ 0.2
SPDEF-202ENST00000544425 PRKAG3Q9UGI9 489 aa16.29■□□□□ 0.2
SPDEF-202ENST00000544425 STARD13Q9Y3M8 1113 aa16.29■□□□□ 0.2
SPDEF-202ENST00000544425 USP15Q9Y4E8 981 aaPredicted RBP16.29■□□□□ 0.2
SPDEF-202ENST00000544425 INSL6Q9Y581 213 aa16.29■□□□□ 0.2
SPDEF-202ENST00000544425 ITGA2BP08514 1039 aa16.28■□□□□ 0.2
SPDEF-202ENST00000544425 CNPP09543 421 aaKnown RBP16.28■□□□□ 0.2
SPDEF-202ENST00000544425 NMBRP28336 390 aa16.28■□□□□ 0.2
SPDEF-202ENST00000544425 SPRP35270 261 aaPredicted RBP16.28■□□□□ 0.2
SPDEF-202ENST00000544425 ACVRL1P37023 503 aa16.28■□□□□ 0.2
SPDEF-202ENST00000544425 LBX1P52954 281 aa16.28■□□□□ 0.2
SPDEF-202ENST00000544425 GNA12Q03113 381 aa16.28■□□□□ 0.2
SPDEF-202ENST00000544425 TMCO4Q5TGY1 634 aa16.28■□□□□ 0.2
SPDEF-202ENST00000544425 PDPK2PQ6A1A2 396 aa16.28■□□□□ 0.2
SPDEF-202ENST00000544425 LILRA6Q6PI73 481 aa16.28■□□□□ 0.2
SPDEF-202ENST00000544425 CDHR3Q6ZTQ4 885 aa16.28■□□□□ 0.2
SPDEF-202ENST00000544425 SETD3Q86TU7 594 aaPredicted RBP16.28■□□□□ 0.2
SPDEF-202ENST00000544425 KCNMB4Q86W47 210 aa16.28■□□□□ 0.2
SPDEF-202ENST00000544425 HERC6Q8IVU3 1022 aa16.28■□□□□ 0.2
SPDEF-202ENST00000544425 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.28■□□□□ 0.2
SPDEF-202ENST00000544425 ARRDC2Q8TBH0 407 aa16.28■□□□□ 0.2
SPDEF-202ENST00000544425 ISL2Q96A47 359 aa16.28■□□□□ 0.2
SPDEF-202ENST00000544425 PLCD4Q9BRC7 762 aa16.28■□□□□ 0.2
SPDEF-202ENST00000544425 IL21Q9HBE4 155 aa16.28■□□□□ 0.2
SPDEF-202ENST00000544425 RRP15Q9Y3B9 282 aaKnown RBP16.28■□□□□ 0.2
SPDEF-202ENST00000544425 PSAT1Q9Y617 370 aa16.28■□□□□ 0.2
SPDEF-202ENST00000544425 ILVBLA1L0T0 632 aa16.27■□□□□ 0.2
SPDEF-202ENST00000544425 ZBBXA8MT70 800 aa16.27■□□□□ 0.2
SPDEF-202ENST00000544425 EDF1O60869 148 aaKnown RBP16.27■□□□□ 0.2
SPDEF-202ENST00000544425 KIAA0754O94854 1291 aa16.27■□□□□ 0.2
SPDEF-202ENST00000544425 OLFM2O95897 454 aa16.27■□□□□ 0.2
SPDEF-202ENST00000544425 MMP2P08253 660 aa16.27■□□□□ 0.2
SPDEF-202ENST00000544425 CSE1LP55060 971 aaKnown RBP16.27■□□□□ 0.2
SPDEF-202ENST00000544425 ITKQ08881 620 aa16.27■□□□□ 0.2
SPDEF-202ENST00000544425 HSP90AA5PQ58FG0 334 aa16.27■□□□□ 0.2
SPDEF-202ENST00000544425 SPATA21Q7Z572 469 aa16.27■□□□□ 0.2
SPDEF-202ENST00000544425 UBE2Q1Q7Z7E8 422 aa16.27■□□□□ 0.2
SPDEF-202ENST00000544425 NDUFAF2Q8N183 169 aa16.27■□□□□ 0.2
SPDEF-202ENST00000544425 PPHLN1Q8NEY8 458 aaKnown RBP16.27■□□□□ 0.2
SPDEF-202ENST00000544425 ZFRQ96KR1 1074 aaKnown RBP16.27■□□□□ 0.2
SPDEF-202ENST00000544425 FAM111AQ96PZ2 611 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms