RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 NT5C3BQ969T7 300 aa17.8■□□□□ 0.44
PPP1CA-210ENST00000542876 ARRDC3Q96B67 414 aa17.8■□□□□ 0.44
PPP1CA-210ENST00000542876 HDAC8Q9BY41 377 aa17.8■□□□□ 0.44
PPP1CA-210ENST00000542876 TNKS2Q9H2K2 1166 aa17.8■□□□□ 0.44
PPP1CA-210ENST00000542876 NDST4Q9H3R1 872 aa17.8■□□□□ 0.44
PPP1CA-210ENST00000542876 FZD3Q9NPG1 666 aa17.8■□□□□ 0.44
PPP1CA-210ENST00000542876 ANLNQ9NQW6 1124 aa17.8■□□□□ 0.44
PPP1CA-210ENST00000542876 ILVBLA1L0T0 632 aa17.79■□□□□ 0.44
PPP1CA-210ENST00000542876 TRIM38O00635 465 aa17.79■□□□□ 0.44
PPP1CA-210ENST00000542876 FFAR2O15552 330 aa17.79■□□□□ 0.44
PPP1CA-210ENST00000542876 ENDOD1O94919 500 aa17.79■□□□□ 0.44
PPP1CA-210ENST00000542876 CYP11B1P15538 503 aa17.79■□□□□ 0.44
PPP1CA-210ENST00000542876 CDH5P33151 784 aaPredicted RBP17.79■□□□□ 0.44
PPP1CA-210ENST00000542876 ACTN2P35609 894 aa17.79■□□□□ 0.44
PPP1CA-210ENST00000542876 GABRB2P47870 512 aa17.79■□□□□ 0.44
PPP1CA-210ENST00000542876 DNA2P51530 1060 aa17.79■□□□□ 0.44
PPP1CA-210ENST00000542876 NEK3P51956 506 aa17.79■□□□□ 0.44
PPP1CA-210ENST00000542876 INSM1Q01101 510 aaPredicted RBP17.79■□□□□ 0.44
PPP1CA-210ENST00000542876 SLC20A2Q08357 652 aa17.79■□□□□ 0.44
PPP1CA-210ENST00000542876 DRAP1Q14919 205 aaPredicted RBP17.79■□□□□ 0.44
PPP1CA-210ENST00000542876 VWA3BQ502W6 1294 aa17.79■□□□□ 0.44
PPP1CA-210ENST00000542876 ZNF683Q8IZ20 524 aa17.79■□□□□ 0.44
PPP1CA-210ENST00000542876 SLC25A45Q8N413 288 aa17.79■□□□□ 0.44
PPP1CA-210ENST00000542876 CHST14Q8NCH0 376 aa17.79■□□□□ 0.44
PPP1CA-210ENST00000542876 OR13H1Q8NG92 308 aa17.79■□□□□ 0.44
PPP1CA-210ENST00000542876 CRELD1Q96HD1 420 aa17.79■□□□□ 0.44
PPP1CA-210ENST00000542876 HAPLN3Q96S86 360 aa17.79■□□□□ 0.44
PPP1CA-210ENST00000542876 CEP44Q9C0F1 390 aa17.79■□□□□ 0.44
PPP1CA-210ENST00000542876 EVA1BQ9NVM1 165 aa17.79■□□□□ 0.44
PPP1CA-210ENST00000542876 SMG1Q96Q15 3661 aaKnown RBP17.78■□□□□ 0.44
PPP1CA-210ENST00000542876 NYNRINQ9P2P1 1898 aaKnown RBP17.78■□□□□ 0.44
PPP1CA-210ENST00000542876 IGLV3-10A0A075B6K4 115 aa17.78■□□□□ 0.44
PPP1CA-210ENST00000542876 NEMP2A6NFY4 417 aa17.78■□□□□ 0.44
PPP1CA-210ENST00000542876 A6NNZ2 444 aa17.78■□□□□ 0.44
PPP1CA-210ENST00000542876 GOLGA8SH3BPF8 625 aa17.78■□□□□ 0.44
PPP1CA-210ENST00000542876 LEFTY1O75610 366 aa17.78■□□□□ 0.44
PPP1CA-210ENST00000542876 LSM8O95777 96 aaKnown RBP17.78■□□□□ 0.44
PPP1CA-210ENST00000542876 ITPKBP27987 946 aa17.78■□□□□ 0.44
PPP1CA-210ENST00000542876 RPS21P63220 83 aaKnown RBP17.78■□□□□ 0.44
PPP1CA-210ENST00000542876 MAPK8IP2Q13387 824 aaPredicted RBP17.78■□□□□ 0.44
PPP1CA-210ENST00000542876 TAF3Q5VWG9 929 aa17.78■□□□□ 0.44
PPP1CA-210ENST00000542876 KDM7AQ6ZMT4 941 aa17.78■□□□□ 0.44
PPP1CA-210ENST00000542876 DPY19L3Q6ZPD9 716 aa17.78■□□□□ 0.44
PPP1CA-210ENST00000542876 XYLT1Q86Y38 959 aa17.78■□□□□ 0.44
PPP1CA-210ENST00000542876 DCP2Q8IU60 420 aaKnown RBP17.78■□□□□ 0.44
PPP1CA-210ENST00000542876 DCBLD1Q8N8Z6 715 aa17.78■□□□□ 0.44
PPP1CA-210ENST00000542876 OR7D4Q8NG98 312 aa17.78■□□□□ 0.44
PPP1CA-210ENST00000542876 FGF11Q92914 225 aa17.78■□□□□ 0.44
PPP1CA-210ENST00000542876 BBC3Q96PG8 261 aaPredicted RBP17.78■□□□□ 0.44
PPP1CA-210ENST00000542876 UBL7Q96S82 380 aaPredicted RBP17.78■□□□□ 0.44
PPP1CA-210ENST00000542876 TUBGCP2Q9BSJ2 902 aa17.78■□□□□ 0.44
PPP1CA-210ENST00000542876 ZYG11BQ9C0D3 744 aa17.78■□□□□ 0.44
PPP1CA-210ENST00000542876 ATP13A1Q9HD20 1204 aa17.78■□□□□ 0.44
PPP1CA-210ENST00000542876 UCKL1Q9NWZ5 548 aa17.78■□□□□ 0.44
PPP1CA-210ENST00000542876 ASXL3Q9C0F0 2248 aa17.78■□□□□ 0.44
PPP1CA-210ENST00000542876 TP53BP1Q12888 1972 aaPredicted RBP17.77■□□□□ 0.44
PPP1CA-210ENST00000542876 I6L893 689 aaPredicted RBP17.77■□□□□ 0.44
PPP1CA-210ENST00000542876 TLX3O43711 291 aaPredicted RBP17.77■□□□□ 0.44
PPP1CA-210ENST00000542876 BRINP1O60477 761 aa17.77■□□□□ 0.44
PPP1CA-210ENST00000542876 PIAS2O75928 621 aa17.77■□□□□ 0.44
PPP1CA-210ENST00000542876 MT-CO3P00414 261 aa17.77■□□□□ 0.44
PPP1CA-210ENST00000542876 FLT3P36888 993 aa17.77■□□□□ 0.44
PPP1CA-210ENST00000542876 SERPINH1P50454 418 aaKnown RBP17.77■□□□□ 0.44
PPP1CA-210ENST00000542876 CLDN2P57739 230 aa17.77■□□□□ 0.44
PPP1CA-210ENST00000542876 SEL1L3Q68CR1 1132 aa17.77■□□□□ 0.44
PPP1CA-210ENST00000542876 KIAA1161Q6NSJ0 714 aa17.77■□□□□ 0.44
PPP1CA-210ENST00000542876 TMC6Q7Z403 805 aa17.77■□□□□ 0.44
PPP1CA-210ENST00000542876 PTAR1Q7Z6K3 402 aaPredicted RBP17.77■□□□□ 0.44
PPP1CA-210ENST00000542876 FAM131BQ86XD5 332 aa17.77■□□□□ 0.44
PPP1CA-210ENST00000542876 PCDH20Q8N6Y1 951 aaKnown RBP17.77■□□□□ 0.44
PPP1CA-210ENST00000542876 SNIP1Q8TAD8 396 aaKnown RBP17.77■□□□□ 0.44
PPP1CA-210ENST00000542876 IFT43Q96FT9 208 aa17.77■□□□□ 0.44
PPP1CA-210ENST00000542876 FEM1CQ96JP0 617 aa17.77■□□□□ 0.44
PPP1CA-210ENST00000542876 HEPHQ9BQS7 1158 aa17.77■□□□□ 0.44
PPP1CA-210ENST00000542876 TMPRSS4Q9NRS4 437 aa17.77■□□□□ 0.44
PPP1CA-210ENST00000542876 DNAJC28Q9NX36 388 aa17.77■□□□□ 0.44
PPP1CA-210ENST00000542876 DACH1Q9UI36 760 aa17.77■□□□□ 0.44
PPP1CA-210ENST00000542876 ZFR2Q9UPR6 939 aaKnown RBP17.77■□□□□ 0.44
PPP1CA-210ENST00000542876 HS3ST3A1Q9Y663 406 aa17.77■□□□□ 0.44
PPP1CA-210ENST00000542876 FAM170AA1A519 330 aa17.76■□□□□ 0.43
PPP1CA-210ENST00000542876 CKMT1AP12532 417 aa17.76■□□□□ 0.43
PPP1CA-210ENST00000542876 ADRB3P13945 408 aa17.76■□□□□ 0.43
PPP1CA-210ENST00000542876 ITGB7P26010 798 aa17.76■□□□□ 0.43
PPP1CA-210ENST00000542876 ETFBP38117 255 aa17.76■□□□□ 0.43
PPP1CA-210ENST00000542876 DUSP3P51452 185 aaPredicted RBP17.76■□□□□ 0.43
PPP1CA-210ENST00000542876 HNRNPKP61978 463 aaKnown RBP eCLIP17.76■□□□□ 0.43
PPP1CA-210ENST00000542876 GNA12Q03113 381 aa17.76■□□□□ 0.43
PPP1CA-210ENST00000542876 SGCGQ13326 291 aa17.76■□□□□ 0.43
PPP1CA-210ENST00000542876 ARL13BQ3SXY8 428 aa17.76■□□□□ 0.43
PPP1CA-210ENST00000542876 TMEM259Q4ZIN3 620 aa17.76■□□□□ 0.43
PPP1CA-210ENST00000542876 CARD16Q5EG05 197 aa17.76■□□□□ 0.43
PPP1CA-210ENST00000542876 KLHDC7AQ5VTJ3 777 aa17.76■□□□□ 0.43
PPP1CA-210ENST00000542876 GCNT7Q6ZNI0 430 aa17.76■□□□□ 0.43
PPP1CA-210ENST00000542876 Q6ZSR6 202 aa17.76■□□□□ 0.43
PPP1CA-210ENST00000542876 ABI3BPQ7Z7G0 1075 aa17.76■□□□□ 0.43
PPP1CA-210ENST00000542876 ZSCAN30Q86W11 494 aa17.76■□□□□ 0.43
PPP1CA-210ENST00000542876 DRC7Q8IY82 874 aa17.76■□□□□ 0.43
PPP1CA-210ENST00000542876 CFAP57Q96MR6 1250 aa17.76■□□□□ 0.43
PPP1CA-210ENST00000542876 DUSP23Q9BVJ7 150 aa17.76■□□□□ 0.43
PPP1CA-210ENST00000542876 SLC17A9Q9BYT1 436 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms