RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 CDH22Q9UJ99 828 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 FBXW11Q9UKB1 542 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 TRHDEQ9UKU6 1024 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 VANGL2Q9ULK5 521 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 STAP1Q9ULZ2 295 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 POMPQ9Y244 141 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 TLL2Q9Y6L7 1015 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 A0A096LPK6 155 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 TARM1B6A8C7 271 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 H3BNX3 289 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 KCNK1O00180 336 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 MATN2O00339 956 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 NRP1O14786 923 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 SLC22A2O15244 555 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 ZBTB24O43167 697 aaPredicted RBP5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 TIMM44O43615 452 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 NDUFB5O43674 189 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 STRNO43815 780 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 CREB3O43889 395 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 TRIM13O60858 407 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 HUS1O60921 280 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 FBXO21O94952 628 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 F2P00734 622 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 AMHP03971 560 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 C2P06681 752 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 APOA4P06727 396 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 SBK3P0C264 359 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 SMIM10L2AP0DMW4 78 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 SMIM10L2BP0DMW5 78 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 COX4I1P13073 169 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 PTPN1P18031 435 aaKnown RBP5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 AKAP5P24588 427 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 GMPRP36959 345 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 HADHAP40939 763 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 NDUFV1P49821 464 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 ZNF135P52742 658 aaPredicted RBP5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 PRKAA2P54646 552 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 DAOAP59103 153 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 SH3BP2P78314 561 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 CCNA1P78396 465 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 TMEM62Q0P6H9 643 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 MSLNQ13421 630 aaPredicted RBP5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 SNAPC2Q13487 334 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 OLIG2Q13516 323 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 GRM2Q14416 872 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 RAB41Q5JT25 222 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 VWA5B1Q5TIE3 1220 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 RNF220Q5VTB9 566 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 KIAA0319Q5VV43 1072 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 CST9Q5W186 159 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 IQSEC1Q6DN90 963 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 FRMD7Q6ZUT3 714 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 ACAD11Q709F0 780 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 PDZD4Q76G19 769 aaPredicted RBP5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 RSPH3Q86UC2 560 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 GALNT15Q8N3T1 639 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 FBXW8Q8N3Y1 598 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 SLC25A41Q8N5S1 370 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 CPSF7Q8N684 471 aaKnown RBP5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 NPWQ8N729 165 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 POU5F2Q8N7G0 328 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 ZNF781Q8N8C0 355 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 NETO2Q8NC67 525 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 CCNYQ8ND76 341 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 OR6J1Q8NGC5 347 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 RDH11Q8TC12 318 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 URGCPQ8TCY9 931 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 MAPK15Q8TD08 544 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 FAM149B1Q96BN6 582 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 ZNF669Q96BR6 464 aaPredicted RBP5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 HHIPL1Q96JK4 782 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 TSGA13Q96PP4 275 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 AGAP2Q99490 1192 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 VAT1Q99536 393 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 TSC22D3Q99576 134 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 TTC1Q99614 292 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 OSMRQ99650 979 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 GPR22Q99680 433 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 GATA5Q9BWX5 397 aaPredicted RBP5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 C1QTNF1Q9BXJ1 281 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 OXCT2Q9BYC2 517 aaPredicted RBP5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 DRC3Q9H069 523 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 COG4Q9H9E3 785 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 SPATS2LQ9NUQ6 558 aaKnown RBP5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 RNF19AQ9NV58 838 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 OXSMQ9NWU1 459 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 IL1RAPL1Q9NZN1 696 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 BFARQ9NZS9 450 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 SEPT10Q9P0V9 454 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 KLHL8Q9P2G9 620 aaPredicted RBP5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 TXNDC16Q9P2K2 825 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 MID2Q9UJV3 735 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 VPS28Q9UK41 221 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 ADAMTS6Q9UKP5 1117 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 ARHGAP26Q9UNA1 814 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 SSX2IPQ9Y2D8 614 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 ANKRD6Q9Y2G4 727 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 SLC45A1Q9Y2W3 748 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 THSD7BQ9C0I4 1608 aa5.28□□□□□ -1.56
ATPAF1-212ENST00000542495 EME2A4GXA9 379 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms