RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 ASNSP08243 561 aa13.04□□□□□ -0.32
SFSWAP-209ENST00000540469 EPHX2P34913 555 aa13.04□□□□□ -0.32
SFSWAP-209ENST00000540469 RAB15P59190 212 aa13.04□□□□□ -0.32
SFSWAP-209ENST00000540469 PFKPQ01813 784 aa13.04□□□□□ -0.32
SFSWAP-209ENST00000540469 FSTL1Q12841 308 aa13.04□□□□□ -0.32
SFSWAP-209ENST00000540469 FASTKQ14296 549 aaKnown RBP13.04□□□□□ -0.32
SFSWAP-209ENST00000540469 CHST15Q7LFX5 561 aaPredicted RBP13.04□□□□□ -0.32
SFSWAP-209ENST00000540469 RNF149Q8NC42 400 aa13.04□□□□□ -0.32
SFSWAP-209ENST00000540469 PDZD8Q8NEN9 1154 aa13.04□□□□□ -0.32
SFSWAP-209ENST00000540469 APOL2Q9BQE5 337 aa13.04□□□□□ -0.32
SFSWAP-209ENST00000540469 ADI1Q9BV57 179 aa13.04□□□□□ -0.32
SFSWAP-209ENST00000540469 ANKRD60Q9BZ19 345 aa13.04□□□□□ -0.32
SFSWAP-209ENST00000540469 MAGEB5Q9BZ81 275 aa13.04□□□□□ -0.32
SFSWAP-209ENST00000540469 RPF2Q9H7B2 306 aaKnown RBP13.04□□□□□ -0.32
SFSWAP-209ENST00000540469 SPAG4Q9NPE6 437 aa13.04□□□□□ -0.32
SFSWAP-209ENST00000540469 IARS2Q9NSE4 1012 aaKnown RBP13.04□□□□□ -0.32
SFSWAP-209ENST00000540469 WARS2Q9UGM6 360 aaKnown RBP13.04□□□□□ -0.32
SFSWAP-209ENST00000540469 TSPAN16Q9UKR8 245 aa13.04□□□□□ -0.32
SFSWAP-209ENST00000540469 AP4E1Q9UPM8 1137 aa13.04□□□□□ -0.32
SFSWAP-209ENST00000540469 TMA7Q9Y2S6 64 aaKnown RBP13.04□□□□□ -0.32
SFSWAP-209ENST00000540469 C9IYK1 514 aa13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 SLCO1B7G3V0H7 640 aa13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 MRASO14807 208 aa13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 PAPSS1O43252 624 aaPredicted RBP13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 ALDH1A2O94788 518 aa13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 NPR1P16066 1061 aa13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 SLC7A1P30825 629 aa13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 GPD2P43304 727 aa13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 CD151P48509 253 aa13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 PCYT1AP49585 367 aa13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 KPNA1P52294 538 aaPredicted RBP13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 NME5P56597 212 aa13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 CD300CQ08708 224 aa13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 PMS2P3Q13401 168 aa13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 MAPRE2Q15555 327 aa13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 KIZQ2M2Z5 673 aa13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 STEAP4Q687X5 459 aa13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 CAMK1DQ8IU85 385 aa13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 SLC7A5P1Q8MH63 180 aa13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 CANT1Q8WVQ1 401 aa13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 HNRNPABQ99729 332 aaKnown RBP13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 NAA50Q9GZZ1 169 aaKnown RBP13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 RPF1Q9H9Y2 349 aaKnown RBP13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 OXSMQ9NWU1 459 aa13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 SUPT20HL2P0C7V6 817 aa13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 GSTT2P0CG29 244 aa13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 GSTT2BP0CG30 244 aa13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 CXCL8P10145 99 aa13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 YAP1P46937 504 aaKnown RBP13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 LIMK2P53671 638 aa13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 ATXN1P54253 815 aaKnown RBP13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 RAB39AQ14964 217 aa13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 CYP2A13Q16696 494 aa13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 SUPT20HL1Q3ZLR7 823 aa13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 PERM1Q5SV97 790 aa13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 ZNF362Q5T0B9 420 aaPredicted RBP13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 NANOGP8Q6NSW7 305 aa13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 VSIG10LQ86VR7 867 aa13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 IFNLR1Q8IU57 520 aaPredicted RBP13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 OMDQ99983 421 aa13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 HEPHQ9BQS7 1158 aa13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 UNC93B1Q9H1C4 597 aa13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 LRRC40Q9H9A6 602 aa13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 SMOXQ9NWM0 555 aa13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 PKD2L2Q9NZM6 624 aa13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 SUCOQ9UBS9 1254 aaKnown RBP13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 SFMBT1Q9UHJ3 866 aa13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 MFHAS1Q9Y4C4 1052 aa13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 GPC6Q9Y625 555 aaPredicted RBP13.03□□□□□ -0.32
SFSWAP-209ENST00000540469 TCAF2A6NFQ2 919 aa13.02□□□□□ -0.32
SFSWAP-209ENST00000540469 H0YJX3 145 aa13.02□□□□□ -0.32
SFSWAP-209ENST00000540469 PLA2G6O60733 806 aa13.02□□□□□ -0.32
SFSWAP-209ENST00000540469 PIGRP01833 764 aa13.02□□□□□ -0.32
SFSWAP-209ENST00000540469 MLNP12872 115 aa13.02□□□□□ -0.32
SFSWAP-209ENST00000540469 CD247P20963 164 aa13.02□□□□□ -0.32
SFSWAP-209ENST00000540469 IL10P22301 178 aa13.02□□□□□ -0.32
SFSWAP-209ENST00000540469 BMXP51813 675 aa13.02□□□□□ -0.32
SFSWAP-209ENST00000540469 SLC7A2P52569 658 aa13.02□□□□□ -0.32
SFSWAP-209ENST00000540469 PRKCQQ04759 706 aa13.02□□□□□ -0.32
SFSWAP-209ENST00000540469 KCTD8Q6ZWB6 473 aa13.02□□□□□ -0.32
SFSWAP-209ENST00000540469 CYP4V2Q6ZWL3 525 aaPredicted RBP13.02□□□□□ -0.32
SFSWAP-209ENST00000540469 UTS2BQ765I0 119 aa13.02□□□□□ -0.32
SFSWAP-209ENST00000540469 SPATA6LQ8N4H0 392 aa13.02□□□□□ -0.32
SFSWAP-209ENST00000540469 TBC1D15Q8TC07 691 aa13.02□□□□□ -0.32
SFSWAP-209ENST00000540469 KCTD4Q8WVF5 259 aa13.02□□□□□ -0.32
SFSWAP-209ENST00000540469 TBCBQ99426 244 aa13.02□□□□□ -0.32
SFSWAP-209ENST00000540469 SLC39A3Q9BRY0 314 aa13.02□□□□□ -0.32
SFSWAP-209ENST00000540469 MRIQ9BWK5 157 aa13.02□□□□□ -0.32
SFSWAP-209ENST00000540469 XYLT2Q9H1B5 865 aa13.02□□□□□ -0.32
SFSWAP-209ENST00000540469 ATAD3AQ9NVI7 634 aa13.02□□□□□ -0.32
SFSWAP-209ENST00000540469 TRPC5OSA6NMA1 111 aa13.02□□□□□ -0.32
SFSWAP-209ENST00000540469 GRID2O43424 1007 aa13.02□□□□□ -0.32
SFSWAP-209ENST00000540469 TIMM44O43615 452 aa13.02□□□□□ -0.32
SFSWAP-209ENST00000540469 BAIAP3O94812 1187 aa13.02□□□□□ -0.32
SFSWAP-209ENST00000540469 STBD1O95210 358 aa13.02□□□□□ -0.32
SFSWAP-209ENST00000540469 APOA4P06727 396 aa13.02□□□□□ -0.32
SFSWAP-209ENST00000540469 KCNA2P16389 499 aa13.02□□□□□ -0.32
SFSWAP-209ENST00000540469 CCNA2P20248 432 aa13.02□□□□□ -0.32
SFSWAP-209ENST00000540469 JAK1P23458 1154 aa13.02□□□□□ -0.32
SFSWAP-209ENST00000540469 TTKP33981 857 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms