RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 PPARDQ03181 441 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 MYBPC3Q14896 1274 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 ZNF569Q5MCW4 686 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 KIAA1614Q5VZ46 1190 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 FAM173BQ6P4H8 233 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 SLC30A9Q6PML9 568 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 MICALCLQ6ZW33 695 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 VPS36Q86VN1 386 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 FAM129CQ86XR2 697 aa7.79□□□□□ -1.16
GNE-205ENST00000539815 CACNB4O00305 520 aaPredicted RBP7.78□□□□□ -1.16
GNE-205ENST00000539815 EDIL3O43854 480 aa7.78□□□□□ -1.16
GNE-205ENST00000539815 OPA1O60313 960 aa7.78□□□□□ -1.16
GNE-205ENST00000539815 KATNA1O75449 491 aa7.78□□□□□ -1.16
GNE-205ENST00000539815 ARSHQ5FYA8 562 aa7.78□□□□□ -1.16
GNE-205ENST00000539815 C16orf46Q6P387 395 aa7.78□□□□□ -1.16
GNE-205ENST00000539815 SV2AQ7L0J3 742 aa7.78□□□□□ -1.16
GNE-205ENST00000539815 GKN2Q86XP6 184 aa7.78□□□□□ -1.16
GNE-205ENST00000539815 TMEM130Q8N3G9 435 aa7.78□□□□□ -1.16
GNE-205ENST00000539815 FAM46DQ8NEK8 389 aa7.78□□□□□ -1.16
GNE-205ENST00000539815 GRAMD1AQ96CP6 724 aa7.78□□□□□ -1.16
GNE-205ENST00000539815 MED8Q96G25 268 aa7.78□□□□□ -1.16
GNE-205ENST00000539815 APOBEC3BQ9UH17 382 aaKnown RBP7.78□□□□□ -1.16
GNE-205ENST00000539815 AGO1Q9UL18 857 aaKnown RBP7.78□□□□□ -1.16
GNE-205ENST00000539815 BTBD3Q9Y2F9 522 aa7.78□□□□□ -1.16
GNE-205ENST00000539815 STARD13Q9Y3M8 1113 aa7.78□□□□□ -1.16
GNE-205ENST00000539815 CLIC4Q9Y696 253 aa7.78□□□□□ -1.16
GNE-205ENST00000539815 TDRD15B5MCY1 1934 aaKnown RBP7.78□□□□□ -1.16
GNE-205ENST00000539815 ZNF638Q14966 1978 aaKnown RBP7.78□□□□□ -1.16
GNE-205ENST00000539815 A6NCN8 305 aa7.78□□□□□ -1.16
GNE-205ENST00000539815 A6NNZ2 444 aa7.78□□□□□ -1.16
GNE-205ENST00000539815 GABRDO14764 452 aa7.78□□□□□ -1.16
GNE-205ENST00000539815 RNGTTO60942 597 aaKnown RBP7.78□□□□□ -1.16
GNE-205ENST00000539815 CST3P01034 146 aaPredicted RBP7.78□□□□□ -1.16
GNE-205ENST00000539815 ALPIP09923 528 aa7.78□□□□□ -1.16
GNE-205ENST00000539815 ALOX15P16050 662 aaPredicted RBP7.78□□□□□ -1.16
GNE-205ENST00000539815 HNRNPA2B1P22626 353 aaKnown RBP7.78□□□□□ -1.16
GNE-205ENST00000539815 MAPK9P45984 424 aa7.78□□□□□ -1.16
GNE-205ENST00000539815 MTIF2P46199 727 aaKnown RBP7.78□□□□□ -1.16
GNE-205ENST00000539815 BNIP3Q12983 259 aa7.78□□□□□ -1.16
GNE-205ENST00000539815 ELOCQ15369 112 aa7.78□□□□□ -1.16
GNE-205ENST00000539815 HNRNPA1L2Q32P51 320 aaKnown RBP7.78□□□□□ -1.16
GNE-205ENST00000539815 SNAP47Q5SQN1 464 aa7.78□□□□□ -1.16
GNE-205ENST00000539815 ERAP2Q6P179 960 aa7.78□□□□□ -1.16
GNE-205ENST00000539815 KIAA1328Q86T90 577 aa7.78□□□□□ -1.16
GNE-205ENST00000539815 TRIM48Q8IWZ4 208 aa7.78□□□□□ -1.16
GNE-205ENST00000539815 FUKQ8N0W3 1084 aa7.78□□□□□ -1.16
GNE-205ENST00000539815 CFAP52Q8N1V2 620 aa7.78□□□□□ -1.16
GNE-205ENST00000539815 PMM1Q92871 262 aa7.78□□□□□ -1.16
GNE-205ENST00000539815 SLC39A3Q9BRY0 314 aa7.78□□□□□ -1.16
GNE-205ENST00000539815 BLOC1S4Q9NUP1 217 aa7.78□□□□□ -1.16
GNE-205ENST00000539815 USP27XA6NNY8 438 aa7.77□□□□□ -1.16
GNE-205ENST00000539815 PYCARD-AS1I3L0S3 204 aa7.77□□□□□ -1.16
GNE-205ENST00000539815 ATP8B1O43520 1251 aa7.77□□□□□ -1.16
GNE-205ENST00000539815 EFEMP2O95967 443 aa7.77□□□□□ -1.16
GNE-205ENST00000539815 EPHB1P54762 984 aa7.77□□□□□ -1.16
GNE-205ENST00000539815 DNM1Q05193 864 aaKnown RBP7.77□□□□□ -1.16
GNE-205ENST00000539815 PTK2Q05397 1052 aa7.77□□□□□ -1.16
GNE-205ENST00000539815 DLG2Q15700 870 aa7.77□□□□□ -1.16
GNE-205ENST00000539815 WLSQ5T9L3 541 aa7.77□□□□□ -1.16
GNE-205ENST00000539815 SPOPLQ6IQ16 392 aa7.77□□□□□ -1.16
GNE-205ENST00000539815 RAB11FIP2Q7L804 512 aa7.77□□□□□ -1.16
GNE-205ENST00000539815 Q8N9G6 341 aaPredicted RBP7.77□□□□□ -1.16
GNE-205ENST00000539815 ANKRD52Q8NB46 1076 aa7.77□□□□□ -1.16
GNE-205ENST00000539815 TMC2Q8TDI7 906 aa7.77□□□□□ -1.16
GNE-205ENST00000539815 POM121Q96HA1 1249 aa7.77□□□□□ -1.16
GNE-205ENST00000539815 GABRG3Q99928 467 aa7.77□□□□□ -1.16
GNE-205ENST00000539815 DPH1Q9BZG8 443 aa7.77□□□□□ -1.16
GNE-205ENST00000539815 NEUROG2Q9H2A3 272 aa7.77□□□□□ -1.16
GNE-205ENST00000539815 CNGB3Q9NQW8 809 aa7.77□□□□□ -1.16
GNE-205ENST00000539815 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.77□□□□□ -1.16
GNE-205ENST00000539815 TSPAN16Q9UKR8 245 aa7.77□□□□□ -1.16
GNE-205ENST00000539815 SLC27A6Q9Y2P4 619 aa7.77□□□□□ -1.16
GNE-205ENST00000539815 CAPN7Q9Y6W3 813 aa7.77□□□□□ -1.16
GNE-205ENST00000539815 NAV3Q8IVL0 2385 aa7.77□□□□□ -1.16
GNE-205ENST00000539815 USP9XQ93008 2570 aaPredicted RBP7.77□□□□□ -1.17
GNE-205ENST00000539815 PTPRSQ13332 1948 aa7.77□□□□□ -1.17
GNE-205ENST00000539815 SRGAP2O75044 1071 aa7.77□□□□□ -1.17
GNE-205ENST00000539815 ALDH4A1P30038 563 aa7.77□□□□□ -1.17
GNE-205ENST00000539815 EIF3IQ13347 325 aaKnown RBP7.77□□□□□ -1.17
GNE-205ENST00000539815 C1orf61Q13536 156 aa7.77□□□□□ -1.17
GNE-205ENST00000539815 SLC12A1Q13621 1099 aa7.77□□□□□ -1.17
GNE-205ENST00000539815 SLC39A14Q15043 492 aa7.77□□□□□ -1.17
GNE-205ENST00000539815 KLHDC10Q6PID8 442 aa7.77□□□□□ -1.17
GNE-205ENST00000539815 KLF16Q9BXK1 252 aaPredicted RBP7.77□□□□□ -1.17
GNE-205ENST00000539815 CPNE5Q9HCH3 593 aa7.77□□□□□ -1.17
GNE-205ENST00000539815 CISHQ9NSE2 258 aa7.77□□□□□ -1.17
GNE-205ENST00000539815 IGSF5Q9NSI5 407 aa7.77□□□□□ -1.17
GNE-205ENST00000539815 RAB20Q9NX57 234 aa7.77□□□□□ -1.17
GNE-205ENST00000539815 EFCAB7A8K855 629 aa7.77□□□□□ -1.17
GNE-205ENST00000539815 PDXKO00764 312 aa7.77□□□□□ -1.17
GNE-205ENST00000539815 GOT1P17174 413 aa7.77□□□□□ -1.17
GNE-205ENST00000539815 PRKCHP24723 683 aa7.77□□□□□ -1.17
GNE-205ENST00000539815 CCR10P46092 362 aa7.77□□□□□ -1.17
GNE-205ENST00000539815 TOB1P50616 345 aaPredicted RBP7.77□□□□□ -1.17
GNE-205ENST00000539815 KYNUQ16719 465 aa7.77□□□□□ -1.17
GNE-205ENST00000539815 ARHGAP44Q17R89 818 aa7.77□□□□□ -1.17
GNE-205ENST00000539815 PDCD6IPQ8WUM4 868 aaKnown RBP7.77□□□□□ -1.17
GNE-205ENST00000539815 OSBPL10Q9BXB5 764 aa7.77□□□□□ -1.17
GNE-205ENST00000539815 CENPHQ9H3R5 247 aa7.77□□□□□ -1.17
GNE-205ENST00000539815 ZDHHC6Q9H6R6 413 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms