RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 NRLP54845 237 aa17.57■□□□□ 0.4
CLN6-202ENST00000538696 STARD6P59095 220 aa17.57■□□□□ 0.4
CLN6-202ENST00000538696 GALNT2Q10471 571 aa17.57■□□□□ 0.4
CLN6-202ENST00000538696 PREPLQ4J6C6 727 aaPredicted RBP17.57■□□□□ 0.4
CLN6-202ENST00000538696 IL31Q6EBC2 164 aa17.57■□□□□ 0.4
CLN6-202ENST00000538696 EMBQ6PCB8 327 aa17.57■□□□□ 0.4
CLN6-202ENST00000538696 CDKL3Q8IVW4 592 aaPredicted RBP17.57■□□□□ 0.4
CLN6-202ENST00000538696 CCDC89Q8N998 374 aa17.57■□□□□ 0.4
CLN6-202ENST00000538696 FAM71DQ8N9W8 422 aa17.57■□□□□ 0.4
CLN6-202ENST00000538696 CAVIN3Q969G5 261 aa17.57■□□□□ 0.4
CLN6-202ENST00000538696 EXOC4Q96A65 974 aa17.57■□□□□ 0.4
CLN6-202ENST00000538696 TTC17Q96AE7 1141 aa17.57■□□□□ 0.4
CLN6-202ENST00000538696 SNF8Q96H20 258 aa17.57■□□□□ 0.4
CLN6-202ENST00000538696 SPON2Q9BUD6 331 aa17.57■□□□□ 0.4
CLN6-202ENST00000538696 VPS51Q9UID3 782 aa17.57■□□□□ 0.4
CLN6-202ENST00000538696 BCLAF3A2AJT9 711 aaKnown RBP17.56■□□□□ 0.4
CLN6-202ENST00000538696 TBC1D3BA6NDS4 549 aa17.56■□□□□ 0.4
CLN6-202ENST00000538696 ARHGAP42A6NI28 874 aa17.56■□□□□ 0.4
CLN6-202ENST00000538696 K7EQS6 105 aa17.56■□□□□ 0.4
CLN6-202ENST00000538696 ZMPSTE24O75844 475 aa17.56■□□□□ 0.4
CLN6-202ENST00000538696 CHRM1P11229 460 aaPredicted RBP17.56■□□□□ 0.4
CLN6-202ENST00000538696 VAV1P15498 845 aa17.56■□□□□ 0.4
CLN6-202ENST00000538696 DRD1P21728 446 aa17.56■□□□□ 0.4
CLN6-202ENST00000538696 RBL1P28749 1068 aa17.56■□□□□ 0.4
CLN6-202ENST00000538696 ADCY8P40145 1251 aa17.56■□□□□ 0.4
CLN6-202ENST00000538696 CTSOP43234 321 aaPredicted RBP17.56■□□□□ 0.4
CLN6-202ENST00000538696 PLTPP55058 493 aa17.56■□□□□ 0.4
CLN6-202ENST00000538696 ARF5P84085 180 aa17.56■□□□□ 0.4
CLN6-202ENST00000538696 SIGLEC14Q08ET2 396 aa17.56■□□□□ 0.4
CLN6-202ENST00000538696 GRSF1Q12849 480 aaKnown RBP eCLIP17.56■□□□□ 0.4
CLN6-202ENST00000538696 XRCC4Q13426 336 aa17.56■□□□□ 0.4
CLN6-202ENST00000538696 SERINC3Q13530 473 aa17.56■□□□□ 0.4
CLN6-202ENST00000538696 EIF4HQ15056 248 aaKnown RBP17.56■□□□□ 0.4
CLN6-202ENST00000538696 SLC45A4Q5BKX6 768 aa17.56■□□□□ 0.4
CLN6-202ENST00000538696 FAM182AQ5T1J6 154 aa17.56■□□□□ 0.4
CLN6-202ENST00000538696 ZNF852Q6ZMS4 543 aa17.56■□□□□ 0.4
CLN6-202ENST00000538696 ZNF687Q8N1G0 1237 aa17.56■□□□□ 0.4
CLN6-202ENST00000538696 SORCS1Q8WY21 1168 aa17.56■□□□□ 0.4
CLN6-202ENST00000538696 EDAQ92838 391 aa17.56■□□□□ 0.4
CLN6-202ENST00000538696 USP29Q9HBJ7 922 aa17.56■□□□□ 0.4
CLN6-202ENST00000538696 WHRNQ9P202 907 aa17.56■□□□□ 0.4
CLN6-202ENST00000538696 HCN2Q9UL51 889 aa17.56■□□□□ 0.4
CLN6-202ENST00000538696 NDRG2Q9UN36 371 aaKnown RBP17.56■□□□□ 0.4
CLN6-202ENST00000538696 CFAP69A5D8W1 941 aa17.55■□□□□ 0.4
CLN6-202ENST00000538696 TP73O15350 636 aa17.55■□□□□ 0.4
CLN6-202ENST00000538696 KCNN4O15554 427 aa17.55■□□□□ 0.4
CLN6-202ENST00000538696 KDELR3O43731 214 aa17.55■□□□□ 0.4
CLN6-202ENST00000538696 POLR2EP19388 210 aaKnown RBP17.55■□□□□ 0.4
CLN6-202ENST00000538696 TARSP26639 723 aaKnown RBP17.55■□□□□ 0.4
CLN6-202ENST00000538696 RPL22P35268 128 aaKnown RBP17.55■□□□□ 0.4
CLN6-202ENST00000538696 GARSP41250 739 aaKnown RBP17.55■□□□□ 0.4
CLN6-202ENST00000538696 ITGA8P53708 1063 aa17.55■□□□□ 0.4
CLN6-202ENST00000538696 GPS1Q13098 491 aa17.55■□□□□ 0.4
CLN6-202ENST00000538696 P3H1Q32P28 736 aa17.55■□□□□ 0.4
CLN6-202ENST00000538696 IZUMO3Q5VZ72 239 aa17.55■□□□□ 0.4
CLN6-202ENST00000538696 ZNF354CQ86Y25 554 aa17.55■□□□□ 0.4
CLN6-202ENST00000538696 ATPAF2Q8N5M1 289 aa17.55■□□□□ 0.4
CLN6-202ENST00000538696 FBXO25Q8TCJ0 367 aa17.55■□□□□ 0.4
CLN6-202ENST00000538696 CCHCR1Q8TD31 782 aa17.55■□□□□ 0.4
CLN6-202ENST00000538696 CYB5D2Q8WUJ1 264 aa17.55■□□□□ 0.4
CLN6-202ENST00000538696 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.55■□□□□ 0.42e-7■■■■■ 68.1
CLN6-202ENST00000538696 ART4Q93070 314 aa17.55■□□□□ 0.4
CLN6-202ENST00000538696 SHDQ96IW2 340 aa17.55■□□□□ 0.4
CLN6-202ENST00000538696 C2orf49Q9BVC5 232 aaPredicted RBP17.55■□□□□ 0.4
CLN6-202ENST00000538696 FUT8Q9BYC5 575 aa17.55■□□□□ 0.4
CLN6-202ENST00000538696 CIPCQ9C0C6 399 aa17.55■□□□□ 0.4
CLN6-202ENST00000538696 TBC1D17Q9HA65 648 aa17.55■□□□□ 0.4
CLN6-202ENST00000538696 PDFQ9HBH1 243 aa17.55■□□□□ 0.4
CLN6-202ENST00000538696 LTB4R2Q9NPC1 389 aa17.55■□□□□ 0.4
CLN6-202ENST00000538696 ELOVL2Q9NXB9 296 aa17.55■□□□□ 0.4
CLN6-202ENST00000538696 ACTL7AQ9Y615 435 aa17.55■□□□□ 0.4
CLN6-202ENST00000538696 RAD54BQ9Y620 910 aa17.55■□□□□ 0.4
CLN6-202ENST00000538696 CKAP5Q14008 2032 aa17.55■□□□□ 0.4
CLN6-202ENST00000538696 KANSL1LA0AUZ9 987 aa17.54■□□□□ 0.4
CLN6-202ENST00000538696 HACD1B0YJ81 288 aa17.54■□□□□ 0.4
CLN6-202ENST00000538696 J3KR12 359 aa17.54■□□□□ 0.4
CLN6-202ENST00000538696 CBX4O00257 560 aa17.54■□□□□ 0.4
CLN6-202ENST00000538696 DNALI1O14645 258 aaPredicted RBP17.54■□□□□ 0.4
CLN6-202ENST00000538696 PRAMEF11O60813 436 aa17.54■□□□□ 0.4
CLN6-202ENST00000538696 SASH3O75995 380 aa17.54■□□□□ 0.4
CLN6-202ENST00000538696 MX2P20592 715 aa17.54■□□□□ 0.4
CLN6-202ENST00000538696 TNFRSF4P43489 277 aa17.54■□□□□ 0.4
CLN6-202ENST00000538696 SEC13P55735 322 aa17.54■□□□□ 0.4
CLN6-202ENST00000538696 CCINQ13939 588 aa17.54■□□□□ 0.4
CLN6-202ENST00000538696 PRKD1Q15139 912 aaPredicted RBP17.54■□□□□ 0.4
CLN6-202ENST00000538696 PTPRNQ16849 979 aa17.54■□□□□ 0.4
CLN6-202ENST00000538696 HDAC11Q96DB2 347 aa17.54■□□□□ 0.4
CLN6-202ENST00000538696 RTP4Q96DX8 246 aa17.54■□□□□ 0.4
CLN6-202ENST00000538696 MRGPRX3Q96LB0 322 aa17.54■□□□□ 0.4
CLN6-202ENST00000538696 FMO2Q99518 471 aa17.54■□□□□ 0.4
CLN6-202ENST00000538696 FOXQ1Q9C009 403 aa17.54■□□□□ 0.4
CLN6-202ENST00000538696 SP110Q9HB58 689 aa17.54■□□□□ 0.4
CLN6-202ENST00000538696 IPO11Q9UI26 975 aaKnown RBP17.54■□□□□ 0.4
CLN6-202ENST00000538696 ERVW-1Q9UQF0 538 aa17.54■□□□□ 0.4
CLN6-202ENST00000538696 STARD13Q9Y3M8 1113 aa17.54■□□□□ 0.4
CLN6-202ENST00000538696 MTF2Q9Y483 593 aaPredicted RBP17.54■□□□□ 0.4
CLN6-202ENST00000538696 MAFKO60675 156 aa17.53■□□□□ 0.4
CLN6-202ENST00000538696 CD160O95971 181 aa17.53■□□□□ 0.4
CLN6-202ENST00000538696 ASLP04424 464 aa17.53■□□□□ 0.4
CLN6-202ENST00000538696 ITIH2P19823 946 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms