RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 EYA3Q99504 573 aa10.86□□□□□ -0.67
RTN3-208ENST00000537981 COQ7Q99807 217 aa10.86□□□□□ -0.67
RTN3-208ENST00000537981 TRIM39Q9HCM9 518 aa10.86□□□□□ -0.67
RTN3-208ENST00000537981 TMOD3Q9NYL9 352 aa10.86□□□□□ -0.67
RTN3-208ENST00000537981 ADA2Q9NZK5 511 aa10.86□□□□□ -0.67
RTN3-208ENST00000537981 TRIM64A6NGJ6 449 aa10.85□□□□□ -0.67
RTN3-208ENST00000537981 SCO1O75880 301 aa10.85□□□□□ -0.67
RTN3-208ENST00000537981 MAP3K6O95382 1288 aa10.85□□□□□ -0.67
RTN3-208ENST00000537981 EEF1DP29692 281 aaKnown RBP10.85□□□□□ -0.67
RTN3-208ENST00000537981 CLCNKBP51801 687 aa10.85□□□□□ -0.67
RTN3-208ENST00000537981 SEC13P55735 322 aa10.85□□□□□ -0.67
RTN3-208ENST00000537981 ADGRF4Q8IZF3 695 aa10.85□□□□□ -0.67
RTN3-208ENST00000537981 CADM2Q8N3J6 435 aa10.85□□□□□ -0.67
RTN3-208ENST00000537981 MPP5Q8N3R9 675 aa10.85□□□□□ -0.67
RTN3-208ENST00000537981 PGLYRP2Q96PD5 576 aa10.85□□□□□ -0.67
RTN3-208ENST00000537981 ADI1Q9BV57 179 aa10.85□□□□□ -0.67
RTN3-208ENST00000537981 MAGEE1Q9HCI5 957 aa10.85□□□□□ -0.67
RTN3-208ENST00000537981 HOMER2Q9NSB8 354 aa10.85□□□□□ -0.67
RTN3-208ENST00000537981 THG1LQ9NWX6 298 aaKnown RBP10.85□□□□□ -0.67
RTN3-208ENST00000537981 IP6K2Q9UHH9 426 aa10.85□□□□□ -0.67
RTN3-208ENST00000537981 EVLQ9UI08 416 aaPredicted RBP10.85□□□□□ -0.67
RTN3-208ENST00000537981 ANKRD12Q6UB98 2062 aa10.85□□□□□ -0.67
RTN3-208ENST00000537981 MYO18AQ92614 2054 aaKnown RBP10.85□□□□□ -0.67
RTN3-208ENST00000537981 A0A0X1KG70 313 aa10.85□□□□□ -0.67
RTN3-208ENST00000537981 USP17L10C9JJH3 530 aa10.85□□□□□ -0.67
RTN3-208ENST00000537981 SYNCRIPO60506 623 aaKnown RBP10.85□□□□□ -0.67
RTN3-208ENST00000537981 B4GALT4O60513 344 aa10.85□□□□□ -0.67
RTN3-208ENST00000537981 CLASP2O75122 1294 aaKnown RBP10.85□□□□□ -0.67
RTN3-208ENST00000537981 USP12O75317 370 aa10.85□□□□□ -0.67
RTN3-208ENST00000537981 KRT37O76014 449 aa10.85□□□□□ -0.67
RTN3-208ENST00000537981 ALX3O95076 343 aa10.85□□□□□ -0.67
RTN3-208ENST00000537981 ATP2B4P23634 1241 aa10.85□□□□□ -0.67
RTN3-208ENST00000537981 SEPHS1P49903 392 aa10.85□□□□□ -0.67
RTN3-208ENST00000537981 LSM3P62310 102 aaKnown RBP10.85□□□□□ -0.67
RTN3-208ENST00000537981 PTP4A2Q12974 167 aa10.85□□□□□ -0.67
RTN3-208ENST00000537981 DPYSQ14117 519 aa10.85□□□□□ -0.67
RTN3-208ENST00000537981 TAF5Q15542 800 aa10.85□□□□□ -0.67
RTN3-208ENST00000537981 DALRD3Q5D0E6 543 aaKnown RBP10.85□□□□□ -0.67
RTN3-208ENST00000537981 TMEM236Q5W0B7 351 aa10.85□□□□□ -0.67
RTN3-208ENST00000537981 XAF1Q6GPH4 301 aa10.85□□□□□ -0.67
RTN3-208ENST00000537981 SMIM5Q71RC9 77 aa10.85□□□□□ -0.67
RTN3-208ENST00000537981 TPH2Q8IWU9 490 aa10.85□□□□□ -0.67
RTN3-208ENST00000537981 HACE1Q8IYU2 909 aa10.85□□□□□ -0.67
RTN3-208ENST00000537981 MFSD4AQ8N468 514 aa10.85□□□□□ -0.67
RTN3-208ENST00000537981 TMEM35BQ8NCS4 154 aa10.85□□□□□ -0.67
RTN3-208ENST00000537981 FLAD1Q8NFF5 587 aa10.85□□□□□ -0.67
RTN3-208ENST00000537981 LENG9Q96B70 501 aa10.85□□□□□ -0.67
RTN3-208ENST00000537981 CITED4Q96RK1 184 aa10.85□□□□□ -0.67
RTN3-208ENST00000537981 CAMKK2Q96RR4 588 aa10.85□□□□□ -0.67
RTN3-208ENST00000537981 C2orf40Q9H1Z8 148 aa10.85□□□□□ -0.67
RTN3-208ENST00000537981 RAD21L1Q9H4I0 556 aa10.85□□□□□ -0.67
RTN3-208ENST00000537981 LTB4R2Q9NPC1 389 aa10.85□□□□□ -0.67
RTN3-208ENST00000537981 RAB20Q9NX57 234 aa10.85□□□□□ -0.67
RTN3-208ENST00000537981 HOXC10Q9NYD6 342 aa10.85□□□□□ -0.67
RTN3-208ENST00000537981 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.85□□□□□ -0.67
RTN3-208ENST00000537981 POLG2Q9UHN1 485 aa10.85□□□□□ -0.67
RTN3-208ENST00000537981 HES2Q9Y543 173 aa10.85□□□□□ -0.67
RTN3-208ENST00000537981 E7ENX8 843 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 IDH3BO43837 385 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 SSX4O60224 188 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 NDUFS2O75306 463 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 SERPINB2P05120 415 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 CES1P23141 567 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 MYF6P23409 242 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 CRHR1P34998 444 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 CDKN2BP42772 138 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 CLK1P49759 484 aaKnown RBP10.84□□□□□ -0.67
RTN3-208ENST00000537981 PGGT1BP53609 377 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 YWHAZP63104 245 aaKnown RBP10.84□□□□□ -0.67
RTN3-208ENST00000537981 GPLD1P80108 840 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 NPTX1Q15818 432 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 FSCBQ5H9T9 825 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 PMF1Q6P1K2 205 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 NPNTQ6UXI9 565 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 C1orf186Q6ZWK4 172 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 TRMT1LQ7Z2T5 733 aaKnown RBP10.84□□□□□ -0.67
RTN3-208ENST00000537981 TXNRD3Q86VQ6 643 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 CBWD2Q8IUF1 395 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 NKD2Q969F2 451 aaPredicted RBP10.84□□□□□ -0.67
RTN3-208ENST00000537981 FAM20AQ96MK3 541 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 SERPINI1Q99574 410 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 EIF2AK1Q9BQI3 630 aaKnown RBP10.84□□□□□ -0.67
RTN3-208ENST00000537981 UCKL1Q9NWZ5 548 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 MTRRQ9UBK8 725 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 PRPF19Q9UMS4 504 aaKnown RBP10.84□□□□□ -0.67
RTN3-208ENST00000537981 PMF1-BGLAPU3KQ54 211 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 DOT1LQ8TEK3 1739 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 ITGB4P16144 1822 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 A0A0G2JMP0 313 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 hCG_2039718K7EN88 272 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 EIF3DO15371 548 aaKnown RBP eCLIP10.84□□□□□ -0.67
RTN3-208ENST00000537981 BCAS1O75363 584 aaPredicted RBP10.84□□□□□ -0.67
RTN3-208ENST00000537981 MFN2O95140 757 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 NADKO95544 446 aaPredicted RBP10.84□□□□□ -0.67
RTN3-208ENST00000537981 ALDOAP04075 364 aaKnown RBP10.84□□□□□ -0.67
RTN3-208ENST00000537981 CHRNGP07510 517 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 ASNSP08243 561 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 GLDCP23378 1020 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 TGFBR1P36897 503 aa10.84□□□□□ -0.67
RTN3-208ENST00000537981 CASP3P42574 277 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms