RNA–Protein interactions for RNA: ENST00000537320.5

TNC-211, Transcript of tenascin C, humanhuman

TSL 5 BASIC

Gene TNC, Length 4,946 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-211ENST00000537320 HJURPQ8NCD3 748 aaPredicted RBP11.54□□□□□ -0.56
TNC-211ENST00000537320 MCOLN3Q8TDD5 553 aa11.54□□□□□ -0.56
TNC-211ENST00000537320 NDNQ99608 321 aa11.54□□□□□ -0.56
TNC-211ENST00000537320 ASB8Q9H765 288 aa11.54□□□□□ -0.56
TNC-211ENST00000537320 DCLRE1BQ9H816 532 aa11.54□□□□□ -0.56
TNC-211ENST00000537320 MINDY3Q9H8M7 445 aa11.54□□□□□ -0.56
TNC-211ENST00000537320 BPIFA1Q9NP55 256 aa11.54□□□□□ -0.56
TNC-211ENST00000537320 BATF3Q9NR55 127 aa11.54□□□□□ -0.56
TNC-211ENST00000537320 DTNAQ9Y4J8 743 aa11.54□□□□□ -0.56
TNC-211ENST00000537320 TBC1D3BA6NDS4 549 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 LGR5O75473 907 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 ITGA2BP08514 1039 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 UNGP13051 313 aaPredicted RBP11.53□□□□□ -0.56
TNC-211ENST00000537320 FECHP22830 423 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 WNT3AP56704 352 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 CDC16Q13042 620 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 CTBP1Q13363 440 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 DQX1Q8TE96 717 aaKnown RBP11.53□□□□□ -0.56
TNC-211ENST00000537320 JADE3Q92613 823 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 CASP10Q92851 521 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 ABTB1Q969K4 478 aaPredicted RBP11.53□□□□□ -0.56
TNC-211ENST00000537320 DACH2Q96NX9 599 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 LRRC4CQ9HCJ2 640 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 SNX13Q9Y5W8 968 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 SLC9A3R1O14745 358 aaPredicted RBP11.53□□□□□ -0.56
TNC-211ENST00000537320 ZBTB22O15209 634 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 CPSF4O95639 269 aaKnown RBP11.53□□□□□ -0.56
TNC-211ENST00000537320 LTA4HP09960 611 aaKnown RBP11.53□□□□□ -0.56
TNC-211ENST00000537320 FGFR1P11362 822 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 GRK3P35626 688 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 SERPINB10P48595 397 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 PTP4A2Q12974 167 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 FBXL19Q6PCT2 694 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 GPSM1Q86YR5 675 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 SLC44A2Q8IWA5 706 aaPredicted RBP11.53□□□□□ -0.56
TNC-211ENST00000537320 FNDC5Q8NAU1 212 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 PRCCQ92733 491 aaPredicted RBP11.53□□□□□ -0.56
TNC-211ENST00000537320 NKD2Q969F2 451 aaPredicted RBP11.53□□□□□ -0.56
TNC-211ENST00000537320 SERAC1Q96JX3 654 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 ACBD6Q9BR61 282 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 RCOR3Q9P2K3 495 aaPredicted RBP11.53□□□□□ -0.56
TNC-211ENST00000537320 MEI4A8MW99 385 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 PMM2O15305 246 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 SNX3O60493 162 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 CXCL14O95715 111 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 GABRR2P28476 465 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 MAPK8P45983 427 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 GLUD2P49448 558 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 NDUFV1P49821 464 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 CDK18Q07002 472 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 SGCGQ13326 291 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 PFKFB4Q16877 469 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 ASTE1Q2TB18 679 aaPredicted RBP11.53□□□□□ -0.56
TNC-211ENST00000537320 TMEM154Q6P9G4 183 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 MILR1Q7Z6M3 343 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 BBS7Q8IWZ6 715 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 MIER2Q8N344 545 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 SLAIN1Q8ND83 568 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 LRRC15Q8TF66 581 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 SUSD6Q92537 303 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 ZMYM5Q9UJ78 669 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 DOT1LQ8TEK3 1739 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 PDZK1P1A8MUH7 402 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 F8W810 466 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 GPC1P35052 558 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 PTPN9P43378 593 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 TGM3Q08188 693 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 SMARCB1Q12824 385 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 FASTKQ14296 549 aaKnown RBP11.53□□□□□ -0.56
TNC-211ENST00000537320 WLSQ5T9L3 541 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 METTL3Q86U44 580 aaKnown RBP11.53□□□□□ -0.56
TNC-211ENST00000537320 PIWIL2Q8TC59 973 aaKnown RBP11.53□□□□□ -0.56
TNC-211ENST00000537320 ASB2Q96Q27 587 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 NDEL1Q9GZM8 345 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 PIF1Q9H611 641 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 NR2E1Q9Y466 385 aa11.53□□□□□ -0.56
TNC-211ENST00000537320 A0A1W2PPM1 405 aa11.52□□□□□ -0.56
TNC-211ENST00000537320 C2CD4BA6NLJ0 364 aa11.52□□□□□ -0.56
TNC-211ENST00000537320 MTA2O94776 668 aa11.52□□□□□ -0.56
TNC-211ENST00000537320 RPL14P50914 215 aaKnown RBP11.52□□□□□ -0.56
TNC-211ENST00000537320 CHRNB3Q05901 458 aa11.52□□□□□ -0.56
TNC-211ENST00000537320 CNTN1Q12860 1018 aa11.52□□□□□ -0.56
TNC-211ENST00000537320 DYNC1I2Q13409 638 aaKnown RBP11.52□□□□□ -0.56
TNC-211ENST00000537320 TMED1Q13445 227 aa11.52□□□□□ -0.56
TNC-211ENST00000537320 GALNT3Q14435 633 aa11.52□□□□□ -0.56
TNC-211ENST00000537320 TEX44Q53QW1 395 aa11.52□□□□□ -0.56
TNC-211ENST00000537320 ZC3H12BQ5HYM0 836 aaKnown RBP11.52□□□□□ -0.56
TNC-211ENST00000537320 CCDC185Q8N715 623 aa11.52□□□□□ -0.56
TNC-211ENST00000537320 GFM2Q969S9 779 aaKnown RBP11.52□□□□□ -0.56
TNC-211ENST00000537320 BTN2A3PQ96KV6 586 aa11.52□□□□□ -0.56
TNC-211ENST00000537320 BTBD10Q9BSF8 475 aa11.52□□□□□ -0.56
TNC-211ENST00000537320 HGH1Q9BTY7 390 aa11.52□□□□□ -0.56
TNC-211ENST00000537320 DPY30Q9C005 99 aa11.52□□□□□ -0.56
TNC-211ENST00000537320 FBXO5Q9UKT4 447 aa11.52□□□□□ -0.56
TNC-211ENST00000537320 AGO1Q9UL18 857 aaKnown RBP11.52□□□□□ -0.56
TNC-211ENST00000537320 CLCN5P51795 746 aa11.52□□□□□ -0.57
TNC-211ENST00000537320 SETMARQ53H47 684 aaPredicted RBP11.52□□□□□ -0.57
TNC-211ENST00000537320 CERCAMQ5T4B2 595 aa11.52□□□□□ -0.57
TNC-211ENST00000537320 PYROXD2Q8N2H3 581 aa11.52□□□□□ -0.57
TNC-211ENST00000537320 WDR41Q9HAD4 459 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms