RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 KIAA0930Q6ICG6 404 aaPredicted RBP13.79□□□□□ -0.2
SMG6-203ENST00000536871 FSTL4Q6MZW2 842 aa13.79□□□□□ -0.2
SMG6-203ENST00000536871 KLHDC10Q6PID8 442 aa13.79□□□□□ -0.2
SMG6-203ENST00000536871 RANBP10Q6VN20 620 aa13.79□□□□□ -0.2
SMG6-203ENST00000536871 OTOP3Q7RTS5 596 aa13.79□□□□□ -0.2
SMG6-203ENST00000536871 MTDHQ86UE4 582 aaKnown RBP13.79□□□□□ -0.2
SMG6-203ENST00000536871 UNC5BQ8IZJ1 945 aa13.79□□□□□ -0.2
SMG6-203ENST00000536871 DCLK2Q8N568 766 aa13.79□□□□□ -0.2
SMG6-203ENST00000536871 ATAD1Q8NBU5 361 aa13.79□□□□□ -0.2
SMG6-203ENST00000536871 SKA1Q96BD8 255 aa13.79□□□□□ -0.2
SMG6-203ENST00000536871 MFSD3Q96ES6 412 aa13.79□□□□□ -0.2
SMG6-203ENST00000536871 ZNF599Q96NL3 588 aa13.79□□□□□ -0.2
SMG6-203ENST00000536871 MCMBPQ9BTE3 642 aa13.79□□□□□ -0.2
SMG6-203ENST00000536871 GPR62Q9BZJ7 368 aa13.79□□□□□ -0.2
SMG6-203ENST00000536871 C12orf65Q9H3J6 166 aaKnown RBP13.79□□□□□ -0.2
SMG6-203ENST00000536871 CHRAC1Q9NRG0 131 aa13.79□□□□□ -0.2
SMG6-203ENST00000536871 PIH1D1Q9NWS0 290 aaKnown RBP13.79□□□□□ -0.2
SMG6-203ENST00000536871 HEY2Q9UBP5 337 aa13.79□□□□□ -0.2
SMG6-203ENST00000536871 TCAF1Q9Y4C2 921 aa13.79□□□□□ -0.2
SMG6-203ENST00000536871 PSAT1Q9Y617 370 aa13.79□□□□□ -0.2
SMG6-203ENST00000536871 HEATR9A2RTY3 570 aa13.78□□□□□ -0.2
SMG6-203ENST00000536871 SNUPNO95149 360 aaKnown RBP13.78□□□□□ -0.2
SMG6-203ENST00000536871 PAPSS2O95340 614 aaPredicted RBP13.78□□□□□ -0.2
SMG6-203ENST00000536871 PROCP04070 461 aa13.78□□□□□ -0.2
SMG6-203ENST00000536871 CALB2P22676 271 aa13.78□□□□□ -0.2
SMG6-203ENST00000536871 APLP1P51693 650 aa13.78□□□□□ -0.2
SMG6-203ENST00000536871 HK2P52789 917 aa13.78□□□□□ -0.2
SMG6-203ENST00000536871 IL10RBQ08334 325 aa13.78□□□□□ -0.2
SMG6-203ENST00000536871 ASPHQ12797 758 aa13.78□□□□□ -0.2
SMG6-203ENST00000536871 OVGP1Q12889 678 aa13.78□□□□□ -0.2
SMG6-203ENST00000536871 TAF10Q12962 218 aa13.78□□□□□ -0.2
SMG6-203ENST00000536871 SLC14A2Q15849 920 aa13.78□□□□□ -0.2
SMG6-203ENST00000536871 TMCO4Q5TGY1 634 aa13.78□□□□□ -0.2
SMG6-203ENST00000536871 SNX30Q5VWJ9 437 aa13.78□□□□□ -0.2
SMG6-203ENST00000536871 GALNT7Q86SF2 657 aa13.78□□□□□ -0.2
SMG6-203ENST00000536871 CRIPAKQ8N1N5 446 aa13.78□□□□□ -0.2
SMG6-203ENST00000536871 BBS5Q8N3I7 341 aa13.78□□□□□ -0.2
SMG6-203ENST00000536871 TEX26Q8N6G2 289 aa13.78□□□□□ -0.2
SMG6-203ENST00000536871 ANKLE1Q8NAG6 615 aa13.78□□□□□ -0.2
SMG6-203ENST00000536871 IPMKQ8NFU5 416 aa13.78□□□□□ -0.2
SMG6-203ENST00000536871 RFWD2Q8NHY2 731 aa13.78□□□□□ -0.2
SMG6-203ENST00000536871 PEX13Q92968 403 aa13.78□□□□□ -0.2
SMG6-203ENST00000536871 AZIN2Q96A70 460 aa13.78□□□□□ -0.2
SMG6-203ENST00000536871 PGLYRP2Q96PD5 576 aa13.78□□□□□ -0.2
SMG6-203ENST00000536871 GPR22Q99680 433 aa13.78□□□□□ -0.2
SMG6-203ENST00000536871 KCNK13Q9HB14 408 aa13.78□□□□□ -0.2
SMG6-203ENST00000536871 SP110Q9HB58 689 aa13.78□□□□□ -0.2
SMG6-203ENST00000536871 COPG2Q9UBF2 871 aa13.78□□□□□ -0.2
SMG6-203ENST00000536871 TLK1Q9UKI8 766 aa13.78□□□□□ -0.2
SMG6-203ENST00000536871 TMEM114B3SHH9 223 aa13.78□□□□□ -0.2
SMG6-203ENST00000536871 RAMP2O60895 175 aa13.78□□□□□ -0.2
SMG6-203ENST00000536871 HLA-DQB2P05538 268 aa13.78□□□□□ -0.2
SMG6-203ENST00000536871 MYL2P10916 166 aa13.78□□□□□ -0.2
SMG6-203ENST00000536871 USP46P62068 366 aa13.78□□□□□ -0.2
SMG6-203ENST00000536871 THOC5Q13769 683 aaKnown RBP13.78□□□□□ -0.2
SMG6-203ENST00000536871 USP41Q3LFD5 358 aa13.78□□□□□ -0.2
SMG6-203ENST00000536871 C5orf22Q49AR2 442 aa13.78□□□□□ -0.2
SMG6-203ENST00000536871 FAM182AQ5T1J6 154 aa13.78□□□□□ -0.2
SMG6-203ENST00000536871 MBLAC2Q68D91 279 aa13.78□□□□□ -0.2
SMG6-203ENST00000536871 SLC8B1Q6J4K2 584 aa13.78□□□□□ -0.2
SMG6-203ENST00000536871 C14orf80Q86SX3 495 aa13.78□□□□□ -0.2
SMG6-203ENST00000536871 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.78□□□□□ -0.2
SMG6-203ENST00000536871 PIWIL2Q8TC59 973 aaKnown RBP13.78□□□□□ -0.2
SMG6-203ENST00000536871 USP33Q8TEY7 942 aa13.78□□□□□ -0.2
SMG6-203ENST00000536871 IMP4Q96G21 291 aaKnown RBP13.78□□□□□ -0.2
SMG6-203ENST00000536871 NSL1Q96IY1 281 aa13.78□□□□□ -0.2
SMG6-203ENST00000536871 VPS39Q96JC1 886 aa13.78□□□□□ -0.2
SMG6-203ENST00000536871 SEPT5Q99719 369 aaPredicted RBP13.78□□□□□ -0.2
SMG6-203ENST00000536871 FICDQ9BVA6 458 aa13.78□□□□□ -0.2
SMG6-203ENST00000536871 IARS2Q9NSE4 1012 aaKnown RBP13.78□□□□□ -0.2
SMG6-203ENST00000536871 A0A096LPK6 155 aa13.77□□□□□ -0.21
SMG6-203ENST00000536871 SLC12A8A0AV02 714 aa13.77□□□□□ -0.21
SMG6-203ENST00000536871 TBKBP1A7MCY6 615 aa13.77□□□□□ -0.21
SMG6-203ENST00000536871 CPA3P15088 417 aa13.77□□□□□ -0.21
SMG6-203ENST00000536871 CRABP2P29373 138 aa13.77□□□□□ -0.21
SMG6-203ENST00000536871 ALDH7A1P49419 539 aaKnown RBP13.77□□□□□ -0.21
SMG6-203ENST00000536871 GPR15P49685 360 aa13.77□□□□□ -0.21
SMG6-203ENST00000536871 PGFP49763 221 aa13.77□□□□□ -0.21
SMG6-203ENST00000536871 GPNMBQ14956 572 aa13.77□□□□□ -0.21
SMG6-203ENST00000536871 CES3Q6UWW8 571 aa13.77□□□□□ -0.21
SMG6-203ENST00000536871 ARHGAP36Q6ZRI8 547 aa13.77□□□□□ -0.21
SMG6-203ENST00000536871 CLEC14AQ86T13 490 aa13.77□□□□□ -0.21
SMG6-203ENST00000536871 ARHGAP24Q8N264 748 aa13.77□□□□□ -0.21
SMG6-203ENST00000536871 CFAP61Q8NHU2 1237 aa13.77□□□□□ -0.21
SMG6-203ENST00000536871 THOC1Q96FV9 657 aaKnown RBP13.77□□□□□ -0.21
SMG6-203ENST00000536871 MPP6Q9NZW5 540 aa13.77□□□□□ -0.21
SMG6-203ENST00000536871 MTRRQ9UBK8 725 aa13.77□□□□□ -0.21
SMG6-203ENST00000536871 DNMT3LQ9UJW3 386 aa13.77□□□□□ -0.21
SMG6-203ENST00000536871 EMCNQ9ULC0 261 aa13.77□□□□□ -0.21
SMG6-203ENST00000536871 ATP6V1G2O95670 118 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 NMBRP28336 390 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 ATP5C1P36542 298 aaKnown RBP13.76□□□□□ -0.21
SMG6-203ENST00000536871 PBX3P40426 434 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 PPP3CCP48454 512 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 ARPP19P56211 112 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 SLC12A1Q13621 1099 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 POLD3Q15054 466 aaPredicted RBP13.76□□□□□ -0.21
SMG6-203ENST00000536871 PSMD5Q16401 504 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 TSNAXIP1Q2TAA8 658 aa13.76□□□□□ -0.21
SMG6-203ENST00000536871 SDHAF4Q5VUM1 108 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms