RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 LYL1P12980 280 aa4.84□□□□□ -1.63
VBP1-203ENST00000535916 GYS1P13807 737 aa4.84□□□□□ -1.63
VBP1-203ENST00000535916 AK2P54819 239 aa4.84□□□□□ -1.63
VBP1-203ENST00000535916 MYBPC2Q14324 1141 aa4.84□□□□□ -1.63
VBP1-203ENST00000535916 MRGPRG-AS1Q2M3A8 158 aa4.84□□□□□ -1.63
VBP1-203ENST00000535916 TBRG1Q3YBR2 411 aa4.84□□□□□ -1.63
VBP1-203ENST00000535916 C11orf96Q7Z7L8 435 aa4.84□□□□□ -1.63
VBP1-203ENST00000535916 SERPINA11Q86U17 422 aa4.84□□□□□ -1.63
VBP1-203ENST00000535916 ZDHHC23Q8IYP9 409 aa4.84□□□□□ -1.63
VBP1-203ENST00000535916 RSC1A1Q92681 617 aa4.84□□□□□ -1.63
VBP1-203ENST00000535916 ADGRG7Q96K78 797 aa4.84□□□□□ -1.63
VBP1-203ENST00000535916 IFT27Q9BW83 186 aa4.84□□□□□ -1.63
VBP1-203ENST00000535916 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.84□□□□□ -1.63
VBP1-203ENST00000535916 SDF2L1Q9HCN8 221 aa4.84□□□□□ -1.63
VBP1-203ENST00000535916 RCE1Q9Y256 329 aa4.84□□□□□ -1.63
VBP1-203ENST00000535916 LOC105371045A0A1W2PR82 267 aa4.83□□□□□ -1.64
VBP1-203ENST00000535916 RNMTO43148 476 aaKnown RBP4.83□□□□□ -1.64
VBP1-203ENST00000535916 CGAP01215 116 aa4.83□□□□□ -1.64
VBP1-203ENST00000535916 DAOP14920 347 aa4.83□□□□□ -1.64
VBP1-203ENST00000535916 RFC1P35251 1148 aaPredicted RBP4.83□□□□□ -1.64
VBP1-203ENST00000535916 ILF3Q12906 894 aaKnown RBP eCLIP4.83□□□□□ -1.64
VBP1-203ENST00000535916 ALKBH1Q13686 389 aaKnown RBP4.83□□□□□ -1.64
VBP1-203ENST00000535916 CTTNQ14247 550 aaKnown RBP4.83□□□□□ -1.64
VBP1-203ENST00000535916 SF3B4Q15427 424 aaKnown RBP eCLIP4.83□□□□□ -1.641e-6■□□□□ 8.6
VBP1-203ENST00000535916 GXYLT1Q4G148 440 aa4.83□□□□□ -1.64
VBP1-203ENST00000535916 WDR5BQ86VZ2 330 aa4.83□□□□□ -1.64
VBP1-203ENST00000535916 SCN4BQ8IWT1 228 aa4.83□□□□□ -1.64
VBP1-203ENST00000535916 SYTL1Q8IYJ3 562 aa4.83□□□□□ -1.64
VBP1-203ENST00000535916 TEX45Q8NA69 505 aa4.83□□□□□ -1.64
VBP1-203ENST00000535916 SLC2A12Q8TD20 617 aa4.83□□□□□ -1.64
VBP1-203ENST00000535916 TXNDC15Q96J42 360 aa4.83□□□□□ -1.64
VBP1-203ENST00000535916 LHPPQ9H008 270 aa4.83□□□□□ -1.64
VBP1-203ENST00000535916 GAREM1Q9H706 876 aa4.83□□□□□ -1.64
VBP1-203ENST00000535916 PHTF1Q9UMS5 762 aa4.83□□□□□ -1.64
VBP1-203ENST00000535916 OSGIN2Q9Y236 505 aa4.83□□□□□ -1.64
VBP1-203ENST00000535916 WDR81Q562E7 1941 aa4.83□□□□□ -1.64
VBP1-203ENST00000535916 TMEM247A6NEH6 219 aa4.82□□□□□ -1.64
VBP1-203ENST00000535916 EYA2O00167 538 aa4.82□□□□□ -1.64
VBP1-203ENST00000535916 BMPR1BO00238 502 aa4.82□□□□□ -1.64
VBP1-203ENST00000535916 SP1P08047 785 aa4.82□□□□□ -1.64
VBP1-203ENST00000535916 MXI1P50539 228 aa4.82□□□□□ -1.64
VBP1-203ENST00000535916 EFHC1Q5JVL4 640 aa4.82□□□□□ -1.64
VBP1-203ENST00000535916 KSR2Q6VAB6 950 aa4.82□□□□□ -1.64
VBP1-203ENST00000535916 FAM71BQ8TC56 605 aa4.82□□□□□ -1.64
VBP1-203ENST00000535916 TMEM18Q96B42 140 aa4.82□□□□□ -1.64
VBP1-203ENST00000535916 ACAD9Q9H845 621 aa4.82□□□□□ -1.64
VBP1-203ENST00000535916 DAPP1Q9UN19 280 aa4.82□□□□□ -1.64
VBP1-203ENST00000535916 PRR23AA6NEV1 266 aa4.81□□□□□ -1.64
VBP1-203ENST00000535916 EFCAB8A8MWE9 144 aa4.81□□□□□ -1.64
VBP1-203ENST00000535916 KDM4EB2RXH2 506 aaPredicted RBP4.81□□□□□ -1.64
VBP1-203ENST00000535916 MMP3P08254 477 aa4.81□□□□□ -1.64
VBP1-203ENST00000535916 CDK7P50613 346 aa4.81□□□□□ -1.64
VBP1-203ENST00000535916 SNTA1Q13424 505 aa4.81□□□□□ -1.64
VBP1-203ENST00000535916 SPARCL1Q14515 664 aa4.81□□□□□ -1.64
VBP1-203ENST00000535916 STARD3Q14849 445 aa4.81□□□□□ -1.64
VBP1-203ENST00000535916 GALNTL6Q49A17 601 aa4.81□□□□□ -1.64
VBP1-203ENST00000535916 ATPAF1Q5TC12 328 aaPredicted RBP4.81□□□□□ -1.64
VBP1-203ENST00000535916 ZNF771Q7L3S4 317 aaPredicted RBP4.81□□□□□ -1.64
VBP1-203ENST00000535916 SPATA20Q8TB22 786 aa4.81□□□□□ -1.64
VBP1-203ENST00000535916 DEPTORQ8TB45 409 aa4.81□□□□□ -1.64
VBP1-203ENST00000535916 ARRDC3Q96B67 414 aa4.81□□□□□ -1.64
VBP1-203ENST00000535916 SGCZQ96LD1 299 aa4.81□□□□□ -1.64
VBP1-203ENST00000535916 C8orf48Q96LL4 319 aa4.81□□□□□ -1.64
VBP1-203ENST00000535916 RTKNQ9BST9 563 aa4.81□□□□□ -1.64
VBP1-203ENST00000535916 CADM1Q9BY67 442 aaKnown RBP4.81□□□□□ -1.64
VBP1-203ENST00000535916 BRD8Q9H0E9 1235 aa4.81□□□□□ -1.64
VBP1-203ENST00000535916 METTL14Q9HCE5 456 aaKnown RBP4.81□□□□□ -1.64
VBP1-203ENST00000535916 UPB1Q9UBR1 384 aa4.81□□□□□ -1.64
VBP1-203ENST00000535916 SYN3O14994 580 aa4.8□□□□□ -1.64
VBP1-203ENST00000535916 AFPP02771 609 aaKnown RBP4.8□□□□□ -1.64
VBP1-203ENST00000535916 CYP21A2P08686 494 aa4.8□□□□□ -1.64
VBP1-203ENST00000535916 CKMT1AP12532 417 aa4.8□□□□□ -1.64
VBP1-203ENST00000535916 ACSM2AQ08AH3 577 aa4.8□□□□□ -1.64
VBP1-203ENST00000535916 MYBPHQ13203 477 aa4.8□□□□□ -1.64
VBP1-203ENST00000535916 TMEM268Q5VZI3 342 aa4.8□□□□□ -1.64
VBP1-203ENST00000535916 TBC1D9BQ66K14 1250 aa4.8□□□□□ -1.64
VBP1-203ENST00000535916 NFRKBQ6P4R8 1299 aa4.8□□□□□ -1.64
VBP1-203ENST00000535916 DSTYKQ6XUX3 929 aa4.8□□□□□ -1.64
VBP1-203ENST00000535916 GPT2Q8TD30 523 aa4.8□□□□□ -1.64
VBP1-203ENST00000535916 PIGSQ96S52 555 aa4.8□□□□□ -1.64
VBP1-203ENST00000535916 OBP2BQ9NPH6 170 aa4.8□□□□□ -1.64
VBP1-203ENST00000535916 MALT1Q9UDY8 824 aa4.8□□□□□ -1.64
VBP1-203ENST00000535916 KLQ9UEF7 1012 aa4.8□□□□□ -1.64
VBP1-203ENST00000535916 IGLV5-37A0A075B6J1 123 aa4.79□□□□□ -1.64
VBP1-203ENST00000535916 DYTNA2CJ06 578 aa4.79□□□□□ -1.64
VBP1-203ENST00000535916 PARNO95453 639 aaKnown RBP4.79□□□□□ -1.64
VBP1-203ENST00000535916 DPP6P42658 865 aa4.79□□□□□ -1.64
VBP1-203ENST00000535916 TTC22Q5TAA0 569 aa4.79□□□□□ -1.64
VBP1-203ENST00000535916 IL31Q6EBC2 164 aa4.79□□□□□ -1.64
VBP1-203ENST00000535916 TYW3Q6IPR3 259 aaKnown RBP4.79□□□□□ -1.64
VBP1-203ENST00000535916 RBFAQ8N0V3 343 aa4.79□□□□□ -1.64
VBP1-203ENST00000535916 SCAIQ8N9R8 606 aa4.79□□□□□ -1.64
VBP1-203ENST00000535916 TMEM41AQ96HV5 264 aa4.79□□□□□ -1.64
VBP1-203ENST00000535916 IL17FQ96PD4 163 aa4.79□□□□□ -1.64
VBP1-203ENST00000535916 MYD88Q99836 296 aa4.79□□□□□ -1.64
VBP1-203ENST00000535916 NPFFR1Q9GZQ6 430 aa4.79□□□□□ -1.64
VBP1-203ENST00000535916 CLPBQ9H078 707 aa4.79□□□□□ -1.64
VBP1-203ENST00000535916 ELAC1Q9H777 363 aaKnown RBP4.79□□□□□ -1.64
VBP1-203ENST00000535916 CDC23Q9UJX2 597 aa4.79□□□□□ -1.64
VBP1-203ENST00000535916 SAA2-SAA4A0A096LPE2 208 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms