RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 CLUHO75153 1309 aa17.45■□□□□ 0.38
PHRF1-206ENST00000534320 MYO1GB0I1T2 1018 aa17.45■□□□□ 0.38
PHRF1-206ENST00000534320 TSPAN9O75954 239 aa17.45■□□□□ 0.38
PHRF1-206ENST00000534320 WEE1P30291 646 aa17.45■□□□□ 0.38
PHRF1-206ENST00000534320 POU5F2Q8N7G0 328 aa17.45■□□□□ 0.38
PHRF1-206ENST00000534320 SPATA17Q96L03 361 aa17.45■□□□□ 0.38
PHRF1-206ENST00000534320 POMKQ9H5K3 350 aa17.45■□□□□ 0.38
PHRF1-206ENST00000534320 RCOR3Q9P2K3 495 aaPredicted RBP17.45■□□□□ 0.38
PHRF1-206ENST00000534320 A0A1W2PPM1 405 aa17.45■□□□□ 0.38
PHRF1-206ENST00000534320 ITGA7Q13683 1181 aa17.45■□□□□ 0.38
PHRF1-206ENST00000534320 BRMS1LQ5PSV4 323 aa17.45■□□□□ 0.38
PHRF1-206ENST00000534320 SDE2Q6IQ49 451 aa17.45■□□□□ 0.38
PHRF1-206ENST00000534320 LENG1Q96BZ8 264 aaPredicted RBP17.45■□□□□ 0.38
PHRF1-206ENST00000534320 SLC27A5Q9Y2P5 690 aa17.45■□□□□ 0.38
PHRF1-206ENST00000534320 TRIM71Q2Q1W2 868 aaKnown RBP17.45■□□□□ 0.38
PHRF1-206ENST00000534320 RNF43Q68DV7 783 aa17.45■□□□□ 0.38
PHRF1-206ENST00000534320 MFSD5Q6N075 450 aa17.45■□□□□ 0.38
PHRF1-206ENST00000534320 PIWIL2Q8TC59 973 aaKnown RBP17.45■□□□□ 0.38
PHRF1-206ENST00000534320 ZCWPW1Q9H0M4 648 aa17.45■□□□□ 0.38
PHRF1-206ENST00000534320 FAM32AQ9Y421 112 aaKnown RBP17.45■□□□□ 0.38
PHRF1-206ENST00000534320 MCRS1Q96EZ8 462 aa17.44■□□□□ 0.38
PHRF1-206ENST00000534320 PPP1R10Q96QC0 940 aaKnown RBP17.44■□□□□ 0.38
PHRF1-206ENST00000534320 SPATA16Q9BXB7 569 aa17.44■□□□□ 0.38
PHRF1-206ENST00000534320 ZNF556Q9HAH1 456 aa17.44■□□□□ 0.38
PHRF1-206ENST00000534320 PADI3Q9ULW8 664 aa17.44■□□□□ 0.38
PHRF1-206ENST00000534320 PIGNO95427 931 aa17.44■□□□□ 0.38
PHRF1-206ENST00000534320 S100A9P06702 114 aaKnown RBP17.44■□□□□ 0.38
PHRF1-206ENST00000534320 ITGB6P18564 788 aa17.44■□□□□ 0.38
PHRF1-206ENST00000534320 SOX6P35712 828 aa17.44■□□□□ 0.38
PHRF1-206ENST00000534320 PLK1P53350 603 aa17.44■□□□□ 0.38
PHRF1-206ENST00000534320 FCRL2Q96LA5 508 aaPredicted RBP17.44■□□□□ 0.38
PHRF1-206ENST00000534320 SAC3D1A6NKF1 404 aa17.44■□□□□ 0.38
PHRF1-206ENST00000534320 IGSF6O95976 241 aa17.44■□□□□ 0.38
PHRF1-206ENST00000534320 ADARP55265 1226 aaKnown RBP17.44■□□□□ 0.38
PHRF1-206ENST00000534320 GBE1Q04446 702 aa17.44■□□□□ 0.38
PHRF1-206ENST00000534320 PABPC1LQ4VXU2 614 aaKnown RBP17.44■□□□□ 0.38
PHRF1-206ENST00000534320 CPT1BQ92523 772 aa17.44■□□□□ 0.38
PHRF1-206ENST00000534320 NDRG1Q92597 394 aaKnown RBP17.44■□□□□ 0.38
PHRF1-206ENST00000534320 MID1IP1Q9NPA3 183 aa17.44■□□□□ 0.38
PHRF1-206ENST00000534320 TUBA8Q9NY65 449 aaPredicted RBP17.44■□□□□ 0.38
PHRF1-206ENST00000534320 DCXO43602 365 aa17.44■□□□□ 0.38
PHRF1-206ENST00000534320 ITGA2BP08514 1039 aa17.44■□□□□ 0.38
PHRF1-206ENST00000534320 CD48P09326 243 aa17.44■□□□□ 0.38
PHRF1-206ENST00000534320 PEX5P50542 639 aa17.44■□□□□ 0.38
PHRF1-206ENST00000534320 PPIDQ08752 370 aaKnown RBP17.44■□□□□ 0.38
PHRF1-206ENST00000534320 TP53BP2Q13625 1128 aa17.44■□□□□ 0.38
PHRF1-206ENST00000534320 DEFB115Q30KQ5 88 aa17.44■□□□□ 0.38
PHRF1-206ENST00000534320 RSBN1Q5VWQ0 802 aaPredicted RBP17.44■□□□□ 0.38
PHRF1-206ENST00000534320 ANKS6Q68DC2 871 aa17.44■□□□□ 0.38
PHRF1-206ENST00000534320 MON1AQ86VX9 555 aa17.44■□□□□ 0.38
PHRF1-206ENST00000534320 C7orf43Q8WVR3 580 aa17.44■□□□□ 0.38
PHRF1-206ENST00000534320 TRAPPC9Q96Q05 1148 aa17.44■□□□□ 0.38
PHRF1-206ENST00000534320 KCTD15Q96SI1 283 aaPredicted RBP17.44■□□□□ 0.38
PHRF1-206ENST00000534320 DPEP3Q9H4B8 488 aa17.44■□□□□ 0.38
PHRF1-206ENST00000534320 CATSPERZQ9NTU4 200 aa17.44■□□□□ 0.38
PHRF1-206ENST00000534320 FAM237BA0A1B0GVD1 139 aa17.43■□□□□ 0.38
PHRF1-206ENST00000534320 MEI4A8MW99 385 aa17.43■□□□□ 0.38
PHRF1-206ENST00000534320 FMO4P31512 558 aa17.43■□□□□ 0.38
PHRF1-206ENST00000534320 BCL2L1Q07817 233 aa17.43■□□□□ 0.38
PHRF1-206ENST00000534320 BST1Q10588 318 aa17.43■□□□□ 0.38
PHRF1-206ENST00000534320 FAM192AQ9GZU8 254 aa17.43■□□□□ 0.38
PHRF1-206ENST00000534320 NUP98P52948 1817 aa17.43■□□□□ 0.38
PHRF1-206ENST00000534320 MDM4O15151 490 aa17.43■□□□□ 0.38
PHRF1-206ENST00000534320 USP1O94782 785 aa17.43■□□□□ 0.38
PHRF1-206ENST00000534320 PTPN9P43378 593 aa17.43■□□□□ 0.38
PHRF1-206ENST00000534320 SLC41A1Q8IVJ1 513 aa17.43■□□□□ 0.38
PHRF1-206ENST00000534320 MBD2Q9UBB5 411 aa17.43■□□□□ 0.38
PHRF1-206ENST00000534320 SPASTQ9UBP0 616 aa17.43■□□□□ 0.38
PHRF1-206ENST00000534320 DAPK2Q9UIK4 370 aa17.43■□□□□ 0.38
PHRF1-206ENST00000534320 ZNF112Q9UJU3 913 aa17.43■□□□□ 0.38
PHRF1-206ENST00000534320 PLA2G4CQ9UP65 541 aa17.43■□□□□ 0.38
PHRF1-206ENST00000534320 CRYBG1Q9Y4K1 1723 aa17.43■□□□□ 0.38
PHRF1-206ENST00000534320 TRIM24O15164 1050 aa17.43■□□□□ 0.38
PHRF1-206ENST00000534320 MAPK1P28482 360 aa17.43■□□□□ 0.38
PHRF1-206ENST00000534320 RPL14P50914 215 aaKnown RBP17.43■□□□□ 0.38
PHRF1-206ENST00000534320 CCNG1P51959 295 aa17.43■□□□□ 0.38
PHRF1-206ENST00000534320 ARHGAP1Q07960 439 aa17.43■□□□□ 0.38
PHRF1-206ENST00000534320 LRRC74AQ0VAA2 488 aa17.43■□□□□ 0.38
PHRF1-206ENST00000534320 TRIM25Q14258 630 aaKnown RBP17.43■□□□□ 0.38
PHRF1-206ENST00000534320 ARMC12Q5T9G4 340 aa17.43■□□□□ 0.38
PHRF1-206ENST00000534320 FUKQ8N0W3 1084 aa17.43■□□□□ 0.38
PHRF1-206ENST00000534320 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.43■□□□□ 0.38
PHRF1-206ENST00000534320 LTBP3Q9NS15 1303 aa17.43■□□□□ 0.38
PHRF1-206ENST00000534320 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.43■□□□□ 0.38
PHRF1-206ENST00000534320 PAPSS1O43252 624 aaPredicted RBP17.43■□□□□ 0.38
PHRF1-206ENST00000534320 LGR5O75473 907 aa17.43■□□□□ 0.38
PHRF1-206ENST00000534320 ARIH2O95376 493 aa17.43■□□□□ 0.38
PHRF1-206ENST00000534320 CCL23P55773 120 aa17.43■□□□□ 0.38
PHRF1-206ENST00000534320 OTOAQ7RTW8 1153 aa17.43■□□□□ 0.38
PHRF1-206ENST00000534320 PGBD3Q8N328 593 aa17.43■□□□□ 0.38
PHRF1-206ENST00000534320 VPS50Q96JG6 964 aa17.43■□□□□ 0.38
PHRF1-206ENST00000534320 ZNF558Q96NG5 402 aa17.43■□□□□ 0.38
PHRF1-206ENST00000534320 DPP7Q9UHL4 492 aa17.43■□□□□ 0.38
PHRF1-206ENST00000534320 BCLAF3A2AJT9 711 aaKnown RBP17.42■□□□□ 0.38
PHRF1-206ENST00000534320 C2CD4BA6NLJ0 364 aa17.42■□□□□ 0.38
PHRF1-206ENST00000534320 ELNP15502 786 aa17.42■□□□□ 0.38
PHRF1-206ENST00000534320 LILRA4P59901 499 aa17.42■□□□□ 0.38
PHRF1-206ENST00000534320 NR6A1Q15406 480 aa17.42■□□□□ 0.38
PHRF1-206ENST00000534320 SKIV2LQ15477 1246 aaKnown RBP17.42■□□□□ 0.38
PHRF1-206ENST00000534320 SLC39A4Q6P5W5 647 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms